Semantic retrieval is crucial for modern applications yet remains underexplored in current research. Existing datasets are limited to single languages, single images, or singular retrieval conditions, often failing to fully exploit the expressive capacity of visual information as evidenced by maintained performance when images are replaced with captions. However, practical retrieval scenarios frequently involve interleaved multi-condition queries with multiple images. Hence, this paper introduces MERIT, the first multilingual dataset for interleaved multi-condition semantic retrieval, comprising 320,000 queries with 135,000 products in 5 languages, covering 7 distinct product categories. Extensive experiments on MERIT identify existing models's limitation: focusing solely on global semantic information while neglecting specific conditional elements in queries. Consequently, we propose Coral, a novel fine-tuning framework that adapts pre-trained MLLMs by integrating embedding reconstruction to preserve fine-grained conditional elements and contrastive learning to extract comprehensive global semantics. Experiments demonstrate that Coral achieves a 45.9% performance improvement over conventional approaches on MERIT, with strong generalization capabilities validated across 8 established retrieval benchmarks. Collectively, our contributions - a novel dataset, identification of critical limitations in existing approaches, and an innovative fine-tuning framework - establish a foundation for future research in interleaved multi-condition semantic retrieval.

Context: Open-source Pre-Trained Models (PTMs) provide extensive resources for various Machine Learning (ML) tasks, yet these resources lack a classification tailored to Software Engineering (SE) needs to support the reliable identification and reuse of models for SE. Objective: To address this gap, we derive a taxonomy encompassing 147 SE tasks and apply an SE-oriented classification to PTMs in a popular open-source ML repository, Hugging Face (HF). Method: Our repository mining study followed a five-phase pipeline: (i) identification SE tasks from the literature; (ii) collection of PTM data from the HF API, including model card descriptions and metadata, and the abstracts of the associated arXiv papers; (iii) text processing to ensure consistency; (iv) a two-phase validation of SE relevance, involving humans and LLM assistance, supported by five pilot studies with human annotators and a generalization test; (v) and data analysis. This process yielded a curated catalogue of 2,205 SE PTMs. Results: We find that most SE PTMs target code generation and coding, emphasizing implementation over early or late development stages. In terms of ML tasks, text generation dominates within SE PTMs. Notably, the number of SE PTMs has increased markedly since 2023 Q2, while evaluation remains limited: only 9.6% report benchmark results, mostly scoring below 50%. Conclusions: Our catalogue reveals documentation and transparency gaps, highlights imbalances across SDLC phases, and provides a foundation for automated SE scenarios, such as the sampling and selection of suitable PTMs.

Recent efficient sequence modeling methods such as Gated DeltaNet, TTT, and RWKV-7 have achieved performance improvements by supervising the recurrent memory management through Delta learning rule. Unlike previous state-space models (e.g., Mamba) and gated linear attentions (e.g., GLA), these models introduce interactions between the recurrent state and the key vector, structurally resembling bilinear systems. In this paper, we first introduce the concept of Bilinear RNNs with a comprehensive analysis on the advantages and limitations of these models. Then, based on closed-loop control theory, we propose a novel Bilinear RNN variant named Comba, which adopts a scalar-plus-low-rank state transition, with both state feedback and output feedback corrections. We also implement a hardware-efficient chunk-wise parallel kernel in Triton and train models with 340M/1.3B parameters on large-scale corpus. Comba demonstrates superior performance and computation efficiency in both language and vision modeling.

Genomic Foundation Models (GFMs), such as Evolutionary Scale Modeling (ESM), have demonstrated significant success in variant effect prediction. However, their adversarial robustness remains largely unexplored. To address this gap, we propose SafeGenes: a framework for Secure analysis of genomic foundation models, leveraging adversarial attacks to evaluate robustness against both engineered near-identical adversarial Genes and embedding-space manipulations. In this study, we assess the adversarial vulnerabilities of GFMs using two approaches: the Fast Gradient Sign Method (FGSM) and a soft prompt attack. FGSM introduces minimal perturbations to input sequences, while the soft prompt attack optimizes continuous embeddings to manipulate model predictions without modifying the input tokens. By combining these techniques, SafeGenes provides a comprehensive assessment of GFM susceptibility to adversarial manipulation. Targeted soft prompt attacks induced severe degradation in MLM-based shallow architectures such as ProteinBERT, while still producing substantial failure modes even in high-capacity foundation models such as ESM1b and ESM1v. These findings expose critical vulnerabilities in current foundation models, opening new research directions toward improving their security and robustness in high-stakes genomic applications such as variant effect prediction.

Current LLMs are trained to refuse potentially harmful input queries regardless of whether users actually had harmful intents, causing a tradeoff between safety and user experience. Through a study of 480 participants evaluating 3,840 query-response pairs, we examine how different refusal strategies affect user perceptions across varying motivations. Our findings reveal that response strategy largely shapes user experience, while actual user motivation has negligible impact. Partial compliance -- providing general information without actionable details -- emerges as the optimal strategy, reducing negative user perceptions by over 50% to flat-out refusals. Complementing this, we analyze response patterns of 9 state-of-the-art LLMs and evaluate how 6 reward models score different refusal strategies, demonstrating that models rarely deploy partial compliance naturally and reward models currently undervalue it. This work demonstrates that effective guardrails require focusing on crafting thoughtful refusals rather than detecting intent, offering a path toward AI safety mechanisms that ensure both safety and sustained user engagement.

The democratization of generative AI introduces new forms of human-AI interaction and raises urgent safety, ethical, and cybersecurity concerns. We develop a socio-technical explanation for how generative AI enables and scales cybercrime. Drawing on affordance theory and technological amplification, we argue that generative AI systems create new action possibilities for cybercriminals and magnify pre-existing malicious intent by lowering expertise barriers and increasing attack efficiency. To illustrate this framework, we conduct interrupted time series analyses of two large datasets: (1) 464,190,074 malicious IP address reports from AbuseIPDB, and (2) 281,115 cryptocurrency scam reports from Chainabuse. Using November 30, 2022, as a high-salience public-access shock, we estimate the counterfactual trajectory of reported cyber abuse absent the release, providing an early-warning impact assessment of a general-purpose AI technology. Across both datasets, we observe statistically significant post-intervention increases in reported malicious activity, including an immediate increase of over 1.12 million weekly malicious IP reports and about 722 weekly cryptocurrency scam reports, with sustained growth in the latter. We discuss implications for AI governance, platform-level regulation, and cyber resilience, emphasizing the need for multi-layer socio-technical strategies that help key stakeholders maximize AI's benefits while mitigating its growing cybercrime risks.

Physics-informed neural networks (PINNs) have emerged as a promising approach for solving complex fluid dynamics problems, yet their application to fluid-structure interaction (FSI) problems with moving boundaries remains largely unexplored. This work addresses the critical challenge of modeling FSI systems with moving interfaces, where traditional unified PINN architectures struggle to capture the distinct physics governing fluid and structural domains simultaneously. We present an innovative Eulerian-Lagrangian PINN architecture that integrates immersed boundary method (IBM) principles to solve FSI problems with moving boundary conditions. Our approach fundamentally departs from conventional unified architectures by introducing domain-specific neural networks: an Eulerian network for fluid dynamics and a Lagrangian network for structural interfaces, coupled through physics-based constraints. Additionally, we incorporate learnable B-spline activation functions with SiLU to capture both localized high-gradient features near interfaces and global flow patterns. Empirical studies on a 2D cavity flow problem involving a moving solid structure show that while baseline unified PINNs achieve reasonable velocity predictions, they suffer from substantial pressure errors (12.9%) in structural regions. Our Eulerian-Lagrangian architecture with learnable activations (EL-L) achieves better performance across all metrics, improving accuracy by 24.1-91.4% and particularly reducing pressure errors from 12.9% to 2.39%. These results demonstrate that domain decomposition aligned with physical principles, combined with locality-aware activation functions, is essential for accurate FSI modeling within the PINN framework.

Understanding protein dynamics is critical for elucidating their biological functions. The increasing availability of molecular dynamics (MD) data enables the training of deep generative models to efficiently explore the conformational space of proteins. However, existing approaches either fail to explicitly capture the temporal dependencies between conformations or do not support direct generation of time-independent samples. To address these limitations, we introduce ConfRover, an autoregressive model that simultaneously learns protein conformation and dynamics from MD trajectories, supporting both time-dependent and time-independent sampling. At the core of our model is a modular architecture comprising: (i) an encoding layer, adapted from protein folding models, that embeds protein-specific information and conformation at each time frame into a latent space; (ii) a temporal module, a sequence model that captures conformational dynamics across frames; and (iii) an SE(3) diffusion model as the structure decoder, generating conformations in continuous space. Experiments on ATLAS, a large-scale protein MD dataset of diverse structures, demonstrate the effectiveness of our model in learning conformational dynamics and supporting a wide range of downstream tasks. ConfRover is the first model to sample both protein conformations and trajectories within a single framework, offering a novel and flexible approach for learning from protein MD data. Project website: https://bytedance-seed.github.io/ConfRover.

Fine-grained detection and localization of localized image edits is crucial for assessing content authenticity, especially as modern diffusion models and image editors can produce highly realistic manipulations. However, this problem faces three key challenges: (1) most AIGC detectors produce only a global real-or-fake label without indicating where edits occur; (2) traditional computer vision methods for edit localization typically rely on costly pixel-level annotations; and (3) there is no large-scale, modern benchmark specifically targeting edited-image detection. To address these gaps, we develop an automated data-generation pipeline and construct FragFake, a large-scale benchmark of AI-edited images spanning multiple source datasets, diverse editing models, and several common edit types. Building on FragFake, we are the first to systematically study vision language models (VLMs) for edited-image classification and edited-region localization. Our experiments show that pretrained VLMs, including GPT4o, perform poorly on this task, whereas fine-tuned models such as Qwen2.5-VL achieve high accuracy and substantially higher object precision across all settings. We further explore GRPO-based RLVR training, which yields modest metric gains while improving the interpretability of model outputs. Ablation and transfer analyses reveal how data balancing, training size, LoRA rank, and training domain affect performance, and highlight both the potential and the limitations of cross-editor and cross-dataset generalization. We anticipate that this work will establish a solid foundation to facilitate and inspire subsequent research endeavors in the domain of multimodal content authenticity.

User authorization-based access privileges are a key feature in many safety-critical systems, but have not been extensively studied in the large language model (LLM) realm. In this work, drawing inspiration from such access control systems, we introduce sudoLLM, a novel framework that results in multi-role aligned LLMs, i.e., LLMs that account for, and behave in accordance with, user access rights. sudoLLM injects subtle user-based biases into queries and trains an LLM to utilize this bias signal in order to produce sensitive information if and only if the user is authorized. We present empirical results demonstrating that this approach shows substantially improved alignment, generalization, resistance to prefix-based jailbreaking attacks, and ``fails-closed''. The persistent tension between the language modeling objective and safety alignment, which is often exploited to jailbreak LLMs, is somewhat resolved with the aid of the injected bias signal. Our framework is meant as an additional security layer, and complements existing guardrail mechanisms for enhanced end-to-end safety with LLMs.