Persistence Codebooks for Topological Data Analysis

Zielinski, Bartosz, Juda, Mateusz, Zeppelzauer, Matthias

arXiv.org Machine Learning 

Topological data analysis, such as persistent homology has shown beneficial properties for machine learning in many tasks. Topological representations, such as the persistence diagram (PD), however, have a complex structure (multiset of intervals) which makes it difficult to combine with typical machine learning workflows. We present novel compact fixed-size vectorial representations of PDs based on clustering and bag of words encodings that cope well with the inherent sparsity of PDs. Our novel representations outperform state-of-the-art approaches from topological data analysis and are computationally more efficient.

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