Variational Bayesian Monte Carlo with Noisy Likelihoods
Variational Bayesian Monte Carlo (VBMC) is a recently introduced framework that uses Gaussian process surrogates to perform approximate Bayesian inference in models with black-box, non-cheap likelihoods. In this work, we extend VBMC to deal with noisy log-likelihood evaluations, such as those arising from simulation-based models. We introduce new `global' acquisition functions, such as expected information gain (EIG) and variational interquantile range (VIQR), which are robust to noise and can be efficiently evaluated within the VBMC setting. In a novel, challenging, noisy-inference benchmark comprising of a variety of models with real datasets from computational and cognitive neuroscience, VBMC+VIQR achieves state-of-the-art performance in recovering the ground-truth posteriors and model evidence. In particular, our method vastly outperforms `local' acquisition functions and other surrogate-based inference methods while keeping a small algorithmic cost. Our benchmark corroborates VBMC as a general-purpose technique for sample-efficient black-box Bayesian inference also with noisy models.
Oct-19-2020
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- Japan > Honshū
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- Japan > Honshū
- Europe
- Finland > Uusimaa
- Helsinki (0.04)
- United Kingdom > England
- Cambridgeshire > Cambridge (0.04)
- Finland > Uusimaa
- North America > Canada
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- Genre:
- Research Report > New Finding (0.46)
- Industry:
- Health & Medicine > Therapeutic Area > Neurology (0.68)