PySHRED: A Python package for SHallow REcurrent Decoding for sparse sensing, model reduction and scientific discovery

Ye, David, Williams, Jan, Gao, Mars, Riva, Stefano, Tomasetto, Matteo, Zoro, David, Kutz, J. Nathan

arXiv.org Artificial Intelligence 

PySHRED is a Python package that implements the SHallow REcurrent D ecoder (SHRED) architecture (Figure 1) and provides a high-level interface for sensing, model reduction and physics discovery tasks. Originally proposed as a sensing strategy which is agnostic to sensor placement [1], SHRED provides a lightweight, data-driven framework for reconstructing and forecasting high-dimensional spatiotemporal states from sparse sensor measurements. SHRED achieves this by (i) encoding time-lagged sensor sequences into a low-dimensional latent space using a sequence model, and (ii) decoding these latent representations back into the full spatial field via a decoder model. Since its introduction as a sparse sensing algorithm, several specialized variants have been developed to extend SHRED's capabilities: SHRED-ROM for parametric reduced-order modeling SINDy-SHRED for discovering sparse latent dynamics and stable long-horizon forecasting Multi-field SHRED for modeling dynamically coupled fields PySHRED unifies these variants into a single open-source, extensible, and thoroughly documented Python package, which is also capable of training on compressed representations of the data, allowing for efficient laptop-level training of models. It is accompanied by a rich example gallery of Jupyter Notebook and Google Colab tutorials.

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