Learning Graphical Models
Bayesian Uncertainty for Gradient Aggregation in Multi-Task Learning
Achituve, Idan, Diamant, Idit, Netzer, Arnon, Chechik, Gal, Fetaya, Ethan
As machine learning becomes more prominent there is a growing demand to perform several inference tasks in parallel. Running a dedicated model for each task is computationally expensive and therefore there is a great interest in multi-task learning (MTL). MTL aims at learning a single model that solves several tasks efficiently. Optimizing MTL models is often achieved by computing a single gradient per task and aggregating them for obtaining a combined update direction. However, these approaches do not consider an important aspect, the sensitivity in the gradient dimensions. Here, we introduce a novel gradient aggregation approach using Bayesian inference. We place a probability distribution over the task-specific parameters, which in turn induce a distribution over the gradients of the tasks. This additional valuable information allows us to quantify the uncertainty in each of the gradients dimensions, which can then be factored in when aggregating them. We empirically demonstrate the benefits of our approach in a variety of datasets, achieving state-of-the-art performance.
Vanilla Bayesian Optimization Performs Great in High Dimensions
Hvarfner, Carl, Hellsten, Erik Orm, Nardi, Luigi
High-dimensional problems have long been considered the Achilles' heel of Bayesian optimization algorithms. Spurred by the curse of dimensionality, a large collection of algorithms aim to make it more performant in this setting, commonly by imposing various simplifying assumptions on the objective. In this paper, we identify the degeneracies that make vanilla Bayesian optimization poorly suited to high-dimensional tasks, and further show how existing algorithms address these degeneracies through the lens of lowering the model complexity. Moreover, we propose an enhancement to the prior assumptions that are typical to vanilla Bayesian optimization algorithms, which reduces the complexity to manageable levels without imposing structural restrictions on the objective. Our modification - a simple scaling of the Gaussian process lengthscale prior with the dimensionality - reveals that standard Bayesian optimization works drastically better than previously thought in high dimensions, clearly outperforming existing state-of-the-art algorithms on multiple commonly considered real-world high-dimensional tasks.
LtU-ILI: An All-in-One Framework for Implicit Inference in Astrophysics and Cosmology
Ho, Matthew, Bartlett, Deaglan J., Chartier, Nicolas, Cuesta-Lazaro, Carolina, Ding, Simon, Lapel, Axel, Lemos, Pablo, Lovell, Christopher C., Makinen, T. Lucas, Modi, Chirag, Pandya, Viraj, Pandey, Shivam, Perez, Lucia A., Wandelt, Benjamin, Bryan, Greg L.
This paper presents the Learning the Universe Implicit Likelihood Inference (LtU-ILI) pipeline, a codebase for rapid, user-friendly, and cutting-edge machine learning (ML) inference in astrophysics and cosmology. The pipeline includes software for implementing various neural architectures, training schema, priors, and density estimators in a manner easily adaptable to any research workflow. It includes comprehensive validation metrics to assess posterior estimate coverage, enhancing the reliability of inferred results. Additionally, the pipeline is easily parallelizable, designed for efficient exploration of modeling hyperparameters. To demonstrate its capabilities, we present real applications across a range of astrophysics and cosmology problems, such as: estimating galaxy cluster masses from X-ray photometry; inferring cosmology from matter power spectra and halo point clouds; characterising progenitors in gravitational wave signals; capturing physical dust parameters from galaxy colors and luminosities; and establishing properties of semi-analytic models of galaxy formation. We also include exhaustive benchmarking and comparisons of all implemented methods as well as discussions about the challenges and pitfalls of ML inference in astronomical sciences. All code and examples are made publicly available at https://github.com/maho3/ltu-ili.
An Artificial Intelligence (AI) workflow for catalyst design and optimization
Lai, Nung Siong, Tew, Yi Shen, Zhong, Xialin, Yin, Jun, Li, Jiali, Yan, Binhang, Wang, Xiaonan
In the pursuit of novel catalyst development to address pressing environmental concerns and energy demand, conventional design and optimization methods often fall short due to the complexity and vastness of the catalyst parameter space. The advent of Machine Learning (ML) has ushered in a new era in the field of catalyst optimization, offering potential solutions to the shortcomings of traditional techniques. However, existing methods fail to effectively harness the wealth of information contained within the burgeoning body of scientific literature on catalyst synthesis. To address this gap, this study proposes an innovative Artificial Intelligence (AI) workflow that integrates Large Language Models (LLMs), Bayesian optimization, and an active learning loop to expedite and enhance catalyst optimization. Our methodology combines advanced language understanding with robust optimization strategies, effectively translating knowledge extracted from diverse literature into actionable parameters for practical experimentation and optimization. In this article, we demonstrate the application of this AI workflow in the optimization of catalyst synthesis for ammonia production. The results underscore the workflow's ability to streamline the catalyst development process, offering a swift, resource-efficient, and highprecision alternative to conventional methods. Keywords: Catalysts; Large Language Models; Active Learning; Bayesian Optimization; Ammonia Synthesis 1. Introduction The development of novel catalysts to address increasing energy demand and consumption has become an urgent task in the realm of renewable energy This surge is driven not only by escalating demands from applications in process optimization, yield improvement, and energy saving but also by a heightened awareness and concern for environmental issues, particularly the increase in carbon dioxide emissions. Several optimization strategies are conventionally employed to identify the optimal set of condition parameters, thereby enhancing the performance of the catalyst. The'One Factor At a Time' (OFAT) method is frequently employed as an alternative technique for chemical process optimization and comprehension While these conventional optimization methods and their advancements have undeniably made significant contributions to the field, certain gaps persist that limit their full potential in optimizing catalyst synthesis. The predominant reliance on the empirical knowledge and intuition of seasoned chemists, while invaluable, is not systematically scalable and transferable. Techniques like OFAT and DoE, though statistically rigorous, are often unable to keep pace with the sheer complexity and vastness of the catalyst parameter space, leaving much of it unexplored and underutilized.
Pathspace Kalman Filters with Dynamic Process Uncertainty for Analyzing Time-course Data
Agrahar, Chaitra, Poole, William, Bianco, Simone, El-Samad, Hana
Kalman Filter (KF) is an optimal linear state prediction algorithm, with applications in fields as diverse as engineering, economics, robotics, and space exploration. Here, we develop an extension of the KF, called a Pathspace Kalman Filter (PKF) which allows us to a) dynamically track the uncertainties associated with the underlying data and prior knowledge, and b) take as input an entire trajectory and an underlying mechanistic model, and using a Bayesian methodology quantify the different sources of uncertainty. An application of this algorithm is to automatically detect temporal windows where the internal mechanistic model deviates from the data in a time-dependent manner. First, we provide theorems characterizing the convergence of the PKF algorithm. Then, we numerically demonstrate that the PKF outperforms conventional KF methods on a synthetic dataset lowering the mean-squared-error by several orders of magnitude. Finally, we apply this method to biological time-course dataset involving over 1.8 million gene expression measurements.
A Survey of Offline and Online Learning-Based Algorithms for Multirotor UAVs
Sönmez, Serhat, Rutherford, Matthew J., Valavanis, Kimon P.
Multirotor UAVs are used for a wide spectrum of civilian and public domain applications. Navigation controllers endowed with different attributes and onboard sensor suites enable multirotor autonomous or semi-autonomous, safe flight, operation, and functionality under nominal and detrimental conditions and external disturbances, even when flying in uncertain and dynamically changing environments. During the last decade, given the faster-than-exponential increase of available computational power, different learning-based algorithms have been derived, implemented, and tested to navigate and control, among other systems, multirotor UAVs. Learning algorithms have been, and are used to derive data-driven based models, to identify parameters, to track objects, to develop navigation controllers, and to learn the environment in which multirotors operate. Learning algorithms combined with model-based control techniques have been proven beneficial when applied to multirotors. This survey summarizes published research since 2015, dividing algorithms, techniques, and methodologies into offline and online learning categories, and then, further classifying them into machine learning, deep learning, and reinforcement learning sub-categories. An integral part and focus of this survey are on online learning algorithms as applied to multirotors with the aim to register the type of learning techniques that are either hard or almost hard real-time implementable, as well as to understand what information is learned, why, and how, and how fast. The outcome of the survey offers a clear understanding of the recent state-of-the-art and of the type and kind of learning-based algorithms that may be implemented, tested, and executed in real-time.
Learning from Time Series under Temporal Label Noise
Nagaraj, Sujay, Gerych, Walter, Tonekaboni, Sana, Goldenberg, Anna, Ustun, Berk, Hartvigsen, Thomas
Many sequential classification tasks are affected by label noise that varies over time. Such noise can cause label quality to improve, worsen, or periodically change over time. We first propose and formalize temporal label noise, an unstudied problem for sequential classification of time series. In this setting, multiple labels are recorded in sequence while being corrupted by a time-dependent noise function. We first demonstrate the importance of modelling the temporal nature of the label noise function and how existing methods will consistently underperform. We then propose methods that can train noise-tolerant classifiers by estimating the temporal label noise function directly from data. We show that our methods lead to state-of-the-art performance in the presence of diverse temporal label noise functions using real and synthetic data.
Bounding the Excess Risk for Linear Models Trained on Marginal-Preserving, Differentially-Private, Synthetic Data
Zhou, Yvonne, Liang, Mingyu, Brugere, Ivan, Dachman-Soled, Dana, Dervovic, Danial, Polychroniadou, Antigoni, Wu, Min
The growing use of machine learning (ML) has raised concerns that an ML model may reveal private information about an individual who has contributed to the training dataset. To prevent leakage of sensitive data, we consider using differentially-private (DP), synthetic training data instead of real training data to train an ML model. A key desirable property of synthetic data is its ability to preserve the low-order marginals of the original distribution. Our main contribution comprises novel upper and lower bounds on the excess empirical risk of linear models trained on such synthetic data, for continuous and Lipschitz loss functions. We perform extensive experimentation alongside our theoretical results.
Pedestrian crossing decisions can be explained by bounded optimal decision-making under noisy visual perception
Wang, Yueyang, Srinivasan, Aravinda Ramakrishnan, Jokinen, Jussi P. P., Oulasvirta, Antti, Markkula, Gustav
This paper presents a model of pedestrian crossing decisions, based on the theory of computational rationality. It is assumed that crossing decisions are boundedly optimal, with bounds on optimality arising from human cognitive limitations. While previous models of pedestrian behaviour have been either 'black-box' machine learning models or mechanistic models with explicit assumptions about cognitive factors, we combine both approaches. Specifically, we model mechanistically noisy human visual perception and assumed rewards in crossing, but we use reinforcement learning to learn bounded optimal behaviour policy. The model reproduces a larger number of known empirical phenomena than previous models, in particular: (1) the effect of the time to arrival of an approaching vehicle on whether the pedestrian accepts the gap, the effect of the vehicle's speed on both (2) gap acceptance and (3) pedestrian timing of crossing in front of yielding vehicles, and (4) the effect on this crossing timing of the stopping distance of the yielding vehicle. Notably, our findings suggest that behaviours previously framed as 'biases' in decision-making, such as speed-dependent gap acceptance, might instead be a product of rational adaptation to the constraints of visual perception. Our approach also permits fitting the parameters of cognitive constraints and rewards per individual, to better account for individual differences. To conclude, by leveraging both RL and mechanistic modelling, our model offers novel insights about pedestrian behaviour, and may provide a useful foundation for more accurate and scalable pedestrian models.
Informed Reinforcement Learning for Situation-Aware Traffic Rule Exceptions
Bogdoll, Daniel, Qin, Jing, Nekolla, Moritz, Abouelazm, Ahmed, Joseph, Tim, Zöllner, J. Marius
Reinforcement Learning is a highly active research field with promising advancements. In the field of autonomous driving, however, often very simple scenarios are being examined. Common approaches use non-interpretable control commands as the action space and unstructured reward designs which lack structure. In this work, we introduce Informed Reinforcement Learning, where a structured rulebook is integrated as a knowledge source. We learn trajectories and asses them with a situation-aware reward design, leading to a dynamic reward which allows the agent to learn situations which require controlled traffic rule exceptions. Our method is applicable to arbitrary RL models. We successfully demonstrate high completion rates of complex scenarios with recent model-based agents.