nanodevice
Set Transformer Architectures and Synthetic Data Generation for Flow-Guided Nanoscale Localization
Hube, Mika Leo, Lemic, Filip, Shitiri, Ethungshan, Bartra, Gerard Calvo, Abadal, Sergi, Pérez, Xavier Costa
Flow-guided Localization (FGL) enables the identification of spatial regions within the human body that contain an event of diagnostic interest. FGL does that by leveraging the passive movement of energy-constrained nanodevices circulating through the bloodstream. Existing FGL solutions rely on graph models with fixed topologies or handcrafted features, which limit their adaptability to anatomical variability and hinder scalability. In this work, we explore the use of Set Transformer architectures to address these limitations. Our formulation treats nanodevices' circulation time reports as unordered sets, enabling permutation-invariant, variable-length input processing without relying on spatial priors. To improve robustness under data scarcity and class imbalance, we integrate synthetic data generation via deep generative models, including CGAN, WGAN, WGAN-GP, and CVAE. These models are trained to replicate realistic circulation time distributions conditioned on vascular region labels, and are used to augment the training data. Our results show that the Set Transformer achieves comparable classification accuracy compared to Graph Neural Networks (GNN) baselines, while simultaneously providing by-design improved generalization to anatomical variability. The findings highlight the potential of permutation-invariant models and synthetic augmentation for robust and scalable nanoscale localization.
Tailoring Graph Neural Network-based Flow-guided Localization to Individual Bloodstreams and Activities
Galván, Pablo, Lemic, Filip, Bartra, Gerard Calvo, Abadal, Sergi, Pérez, Xavier Costa
Flow-guided localization using in-body nanodevices in the bloodstream is expected to be beneficial for early disease detection, continuous monitoring of biological conditions, and targeted treatment. The nanodevices face size and power constraints that produce erroneous raw data for localization purposes. On-body anchors receive this data, and use it to derive the locations of diagnostic events of interest. Different Machine Learning (ML) approaches have been recently proposed for this task, yet they are currently restricted to a reference bloodstream of a resting patient. As such, they are unable to deal with the physical diversity of patients' bloodstreams and cannot provide continuous monitoring due to changes in individual patient's activities. Toward addressing these issues for the current State-of-the-Art (SotA) flow-guided localization approach based on Graph Neural Networks (GNNs), we propose a pipeline for GNN adaptation based on individual physiological indicators including height, weight, and heart rate. Our results indicate that the proposed adaptions are beneficial in reconciling the individual differences between bloodstreams and activities.
Analytical Modelling of Raw Data for Flow-Guided In-body Nanoscale Localization
Pascual, Guillem, Lemic, Filip, Delgado, Carmen, Costa-Perez, Xavier
Advancements in nanotechnology and material science are paving the way toward nanoscale devices that combine sensing, computing, data and energy storage, and wireless communication. In precision medicine, these nanodevices show promise for disease diagnostics, treatment, and monitoring from within the patients' bloodstreams. Assigning the location of a sensed biological event with the event itself, which is the main proposition of flow-guided in-body nanoscale localization, would be immensely beneficial from the perspective of precision medicine. The nanoscale nature of the nanodevices and the challenging environment that the bloodstream represents, result in current flow-guided localization approaches being constrained in their communication and energy-related capabilities. The communication and energy constraints of the nanodevices result in different features of raw data for flow-guided localization, in turn affecting its performance. An analytical modeling of the effects of imperfect communication and constrained energy causing intermittent operation of the nanodevices on the raw data produced by the nanodevices would be beneficial. Hence, we propose an analytical model of raw data for flow-guided localization, where the raw data is modeled as a function of communication and energy-related capabilities of the nanodevice. We evaluate the model by comparing its output with the one obtained through the utilization of a simulator for objective evaluation of flow-guided localization, featuring comparably higher level of realism. Our results across a number of scenarios and heterogeneous performance metrics indicate high similarity between the model and simulator-generated raw datasets.
- Health & Medicine > Therapeutic Area (0.47)
- Energy > Energy Storage (0.35)
Graph Neural Network-enabled Terahertz-based Flow-guided Nanoscale Localization
Bartra, Gerard Calvo, Lemic, Filip, Struye, Jakob, Abadal, Sergi, Perez, Xavier Costa
Scientific advancements in nanotechnology and advanced materials are paving the way toward nanoscale devices for in-body precision medicine; comprising integrated sensing, computing, communication, data and energy storage capabilities. In the human cardiovascular system, such devices are envisioned to be passively flowing and continuously sensing for detecting events of diagnostic interest. The diagnostic value of detecting such events can be enhanced by assigning to them their physical locations (e.g., body region), which is the main proposition of flow-guided localization. Current flow-guided localization approaches suffer from low localization accuracy and they are by-design unable to localize events within the entire cardiovascular system. Toward addressing this issue, we propose the utilization of Graph Neural Networks (GNNs) for this purpose, and demonstrate localization accuracy and coverage enhancements of our proposal over the existing State of the Art (SotA) approaches. Based on our evaluation, we provide several design guidelines for GNN-enabled flow-guided localization.
- Energy (0.90)
- Health & Medicine > Therapeutic Area (0.73)
Insights from the Design Space Exploration of Flow-Guided Nanoscale Localization
Lemic, Filip, Bartra, Gerard Calvo, López, Arnau Brosa, Gómez, Jorge Torres, Struye, Jakob, Dressler, Falko, Abadal, Sergi, Perez, Xavier Costa
Nanodevices with Terahertz (THz)-based wireless communication capabilities are providing a primer for flow-guided localization within the human bloodstreams. Such localization is allowing for assigning the locations of sensed events with the events themselves, providing benefits in precision medicine along the lines of early and precise diagnostics, and reduced costs and invasiveness. Flow-guided localization is still in a rudimentary phase, with only a handful of works targeting the problem. Nonetheless, the performance assessments of the proposed solutions are already carried out in a non-standardized way, usually along a single performance metric, and ignoring various aspects that are relevant at such a scale (e.g., nanodevices' limited energy) and for such a challenging environment (e.g., extreme attenuation of in-body THz propagation). As such, these assessments feature low levels of realism and cannot be compared in an objective way. Toward addressing this issue, we account for the environmental and scale-related peculiarities of the scenario and assess the performance of two state-of-the-art flow-guided localization approaches along a set of heterogeneous performance metrics such as the accuracy and reliability of localization.
CMOL CrossNets: Possible Neuromorphic Nanoelectronic Circuits
Lee, Jung Hoon, Ma, Xiaolong, Likharev, Konstantin K.
Hybrid "CMOL" integrated circuits, combining CMOS subsystem with nanowire crossbars and simple two-terminal nanodevices, promise to extend the exponential Moore-Law development of microelectronics into the sub-10-nm range. We are developing neuromorphic network ("CrossNet") architectures for this future technology, in which neural cell bodies are implemented in CMOS, nanowires are used as axons and dendrites, while nanodevices (bistable latching switches) are used as elementary synapses. We have shown how CrossNets may be trained to perform pattern recovery and classification despite the limitations imposed by the CMOL hardware.
- North America > United States > New York > Suffolk County > Stony Brook (0.05)
- North America > United States > Massachusetts > Middlesex County > Cambridge (0.04)
- Europe > Netherlands > North Holland > Amsterdam (0.04)
CMOL CrossNets: Possible Neuromorphic Nanoelectronic Circuits
Lee, Jung Hoon, Ma, Xiaolong, Likharev, Konstantin K.
Hybrid "CMOL" integrated circuits, combining CMOS subsystem with nanowire crossbars and simple two-terminal nanodevices, promise to extend the exponential Moore-Law development of microelectronics into the sub-10-nm range. We are developing neuromorphic network ("CrossNet") architectures for this future technology, in which neural cell bodies are implemented in CMOS, nanowires are used as axons and dendrites, while nanodevices (bistable latching switches) are used as elementary synapses. We have shown how CrossNets may be trained to perform pattern recovery and classification despite the limitations imposed by the CMOL hardware.
- North America > United States > New York > Suffolk County > Stony Brook (0.05)
- North America > United States > Massachusetts > Middlesex County > Cambridge (0.04)
- Europe > Netherlands > North Holland > Amsterdam (0.04)
CMOL CrossNets: Possible Neuromorphic Nanoelectronic Circuits
Lee, Jung Hoon, Ma, Xiaolong, Likharev, Konstantin K.
Hybrid "CMOL" integrated circuits, combining CMOS subsystem with nanowire crossbars and simple two-terminal nanodevices, promise to extend the exponential Moore-Law development of microelectronics into the sub-10-nm range. We are developing neuromorphic network ("CrossNet") architectures for this future technology, in which neural cell bodies are implemented in CMOS, nanowires are used as axons and dendrites, while nanodevices (bistable latching switches) are used as elementary synapses. We have shown how CrossNets may be trained to perform pattern recovery and classification despite the limitations imposed by the CMOL hardware.
- North America > United States > New York > Suffolk County > Stony Brook (0.05)
- North America > United States > Massachusetts > Middlesex County > Cambridge (0.04)
- Europe > Netherlands > North Holland > Amsterdam (0.04)