delineation
- Europe > Switzerland > Zürich > Zürich (0.05)
- Oceania > Tonga (0.04)
- Europe > Norway (0.04)
- (8 more...)
- Information Technology (0.93)
- Health & Medicine (0.67)
AI-driven software for automated quantification of skeletal metastases and treatment response evaluation using Whole-Body Diffusion-Weighted MRI (WB-DWI) in Advanced Prostate Cancer
Candito, Antonio, Blackledge, Matthew D, Holbrey, Richard, Porta, Nuria, Ribeiro, Ana, Zugni, Fabio, D'Erme, Luca, Castagnoli, Francesca, Dragan, Alina, Donners, Ricardo, Messiou, Christina, Tunariu, Nina, Koh, Dow-Mu
Quantitative assessment of treatment response in Advanced Prostate Cancer (APC) with bone metastases remains an unmet clinical need. Whole-Body Diffusion-Weighted MRI (WB-DWI) provides two response biomarkers: Total Diffusion Volume (TDV) and global Apparent Diffusion Coefficient (gADC). However, tracking post-treatment changes of TDV and gADC from manually delineated lesions is cumbersome and increases inter-reader variability. We developed a software to automate this process. Core technologies include: (i) a weakly-supervised Residual U-Net model generating a skeleton probability map to isolate bone; (ii) a statistical framework for WB-DWI intensity normalisation, obtaining a signal-normalised b=900s/mm^2 (b900) image; and (iii) a shallow convolutional neural network that processes outputs from (i) and (ii) to generate a mask of suspected bone lesions, characterised by higher b900 signal intensity due to restricted water diffusion. This mask is applied to the gADC map to extract TDV and gADC statistics. We tested the tool using expert-defined metastatic bone disease delineations on 66 datasets, assessed repeatability of imaging biomarkers (N=10), and compared software-based response assessment with a construct reference standard (N=118). Average dice score between manual and automated delineations was 0.6 for lesions within pelvis and spine, with an average surface distance of 2mm. Relative differences for log-transformed TDV (log-TDV) and median gADC were 8.8% and 5%, respectively. Repeatability analysis showed coefficients of variation of 4.6% for log-TDV and 3.5% for median gADC, with intraclass correlation coefficients of 0.94 or higher. The software achieved 80.5% accuracy, 84.3% sensitivity, and 85.7% specificity in assessing response to treatment. Average computation time was 90s per scan.
- Europe > Switzerland > Basel-City > Basel (0.04)
- Europe > United Kingdom > England > Greater London > London (0.04)
- Europe > Italy > Lazio > Rome (0.04)
- (2 more...)
- Research Report > New Finding (1.00)
- Research Report > Experimental Study (1.00)
- Health & Medicine > Pharmaceuticals & Biotechnology (1.00)
- Health & Medicine > Diagnostic Medicine > Imaging (1.00)
- Health & Medicine > Therapeutic Area > Oncology > Prostate Cancer (0.36)
- Health & Medicine > Therapeutic Area > Oncology > Bone Cancer (0.35)
- Europe > Switzerland > Zürich > Zürich (0.05)
- Oceania > Tonga (0.04)
- Europe > Norway (0.04)
- (8 more...)
- Information Technology (0.93)
- Health & Medicine (0.67)
Domain-Specialized Interactive Segmentation Framework for Meningioma Radiotherapy Planning
Lee, Junhyeok, Jang, Han, Choi, Kyu Sung
Precise delineation of meningiomas is crucial for effective radiotherapy (RT) planning, directly influencing treatment efficacy and preservation of adjacent healthy tissues. While automated deep learning approaches have demonstrated considerable potential, achieving consistently accurate clinical segmentation remains challenging due to tumor heterogeneity. Interactive Medical Image Segmentation (IMIS) addresses this challenge by integrating advanced AI techniques with clinical input. However, generic segmentation tools, despite widespread applicability, often lack the specificity required for clinically critical and disease-specific tasks like meningioma RT planning. To overcome these limitations, we introduce Interactive-MEN-RT, a dedicated IMIS tool specifically developed for clinician-assisted 3D meningioma segmentation in RT workflows. The system incorporates multiple clinically relevant interaction methods, including point annotations, bounding boxes, lasso tools, and scribbles, enhancing usability and clinical precision. In our evaluation involving 500 contrast-enhanced T1-weighted MRI scans from the BraTS 2025 Meningioma RT Segmentation Challenge, Interactive-MEN-RT demonstrated substantial improvement compared to other segmentation methods, achieving Dice similarity coefficients of up to 77.6\% and Intersection over Union scores of 64.8\%. These results emphasize the need for clinically tailored segmentation solutions in critical applications such as meningioma RT planning. The code is publicly available at: https://github.com/snuh-rad-aicon/Interactive-MEN-RT
- Health & Medicine > Therapeutic Area > Oncology (1.00)
- Health & Medicine > Diagnostic Medicine > Imaging (1.00)
Multimodal Slice Interaction Network Enhanced by Transfer Learning for Precise Segmentation of Internal Gross Tumor Volume in Lung Cancer PET/CT Imaging
Luo, Yi, Guo, Yike, Hooshangnejad, Hamed, Zhang, Rui, Feng, Xue, Chen, Quan, Ngwa, Wil, Ding, Kai
Lung cancer remains the leading cause of cancerrelated deaths globally. Accurate delineation of internal gross tumor volume (IGTV) in PET/CT imaging is pivotal for optimal radiation therapy in mobile tumors such as lung cancer to account for tumor motion, yet is hindered by the limited availability of annotated IGTV datasets and attenuated PET signal intensity at tumor boundaries. In this study, we present a transfer learningbased methodology utilizing a multimodal interactive perception network with MAMBA, pre-trained on extensive gross tumor volume (GTV) datasets and subsequently fine-tuned on a private IGTV cohort. This cohort constitutes the PET/CT subset of the Lung-cancer Unified Cross-modal Imaging Dataset (LUCID). To further address the challenge of weak PET intensities in IGTV peripheral slices, we introduce a slice interaction module (SIM) within a 2.5D segmentation framework to effectively model inter-slice relationships. Our proposed module integrates channel and spatial attention branches with depthwise convolutions, enabling more robust learning of slice-to-slice dependencies and thereby improving overall segmentation performance. A comprehensive experimental evaluation demonstrates that our approach achieves a Dice of 0.609 on the private IGTV dataset, substantially surpassing the conventional baseline score of 0.385. This work highlights the potential of transfer learning, coupled with advanced multimodal techniques and a SIM to enhance the reliability and clinical relevance of IGTV segmentation for lung cancer radiation therapy planning.
- North America > United States > Minnesota > Hennepin County > Minneapolis (0.14)
- North America > United States > Virginia > Albemarle County > Charlottesville (0.04)
Federative ischemic stroke segmentation as alternative to overcome domain-shift multi-institution challenges
Rangel, Edgar, Martinez, Fabio
Stroke is the second leading cause of death and the third leading cause of disability worldwide. Clinical guidelines establish diffusion resonance imaging (DWI, ADC) as the standard for localizing, characterizing, and measuring infarct volume, enabling treatment support and prognosis. Nonetheless, such lesion analysis is highly variable due to different patient demographics, scanner vendors, and expert annotations. Computational support approaches have been key to helping with the localization and segmentation of lesions. However, these strategies are dedicated solutions that learn patterns from only one institution, lacking the variability to generalize geometrical lesions shape models. Even worse, many clinical centers lack sufficient labeled samples to adjust these dedicated solutions. This work developed a collaborative framework for segmenting ischemic stroke lesions in DWI sequences by sharing knowledge from deep center-independent representations. From 14 emulated healthcare centers with 2031 studies, the FedAvg model achieved a general DSC of $0.71 \pm 0.24$, AVD of $5.29 \pm 22.74$, ALD of $2.16 \pm 3.60$ and LF1 of $0.70 \pm 0.26$ over all centers, outperforming both the centralized and other federated rules. Interestingly, the model demonstrated strong generalization properties, showing uniform performance across different lesion categories and reliable performance in out-of-distribution centers (with DSC of $0.64 \pm 0.29$ and AVD of $4.44 \pm 8.74$ without any additional training).
- Health & Medicine > Therapeutic Area > Neurology (1.00)
- Health & Medicine > Therapeutic Area > Cardiology/Vascular Diseases (1.00)
Automated surgical planning with nnU-Net: delineation of the anatomy in hepatobiliary phase MRI
Olthof, Karin A., Fusagli, Matteo, Güttner, Bianca, Natali, Tiziano, Westerink, Bram, Speidel, Stefanie, Ruers, Theo J. M., Kuhlmann, Koert F. D., Zhylka, Andrey
Background: The aim of this study was to develop and evaluate a deep learning-based automated segmentation method for hepatic anatomy (i.e., parenchyma, tumors, portal vein, hepatic vein and biliary tree) from the hepatobiliary phase of gadoxetic acid-enhanced MRI. This method should ease the clinical workflow of preoperative planning. Methods: Manual segmentation was performed on hepatobiliary phase MRI scans from 90 consecutive patients who underwent liver surgery between January 2020 and October 2023. A deep learning network (nnU-Net v1) was trained on 72 patients with an extra focus on thin structures and topography preservation. Performance was evaluated on an 18-patient test set by comparing automated and manual segmentations using Dice similarity coefficient (DSC). Following clinical integration, 10 segmentations (assessment dataset) were generated using the network and manually refined for clinical use to quantify required adjustments using DSC. Results: In the test set, DSCs were 0.97+/-0.01 for liver parenchyma, 0.80+/-0.04 for hepatic vein, 0.79+/-0.07 for biliary tree, 0.77+/-0.17 for tumors, and 0.74+/-0.06 for portal vein. Average tumor detection rate was 76.6+/-24.1%, with a median of one false-positive per patient. The assessment dataset showed minor adjustments were required for clinical use of the 3D models, with high DSCs for parenchyma (1.00+/-0.00), portal vein (0.98+/-0.01) and hepatic vein (0.95+/-0.07). Tumor segmentation exhibited greater variability (DSC 0.80+/-0.27). During prospective clinical use, the model detected three additional tumors initially missed by radiologists. Conclusions: The proposed nnU-Net-based segmentation method enables accurate and automated delineation of hepatic anatomy. This enables 3D planning to be applied efficiently as a standard-of-care for every patient undergoing liver surgery.
- Europe > Netherlands > North Holland > Amsterdam (0.05)
- Europe > Germany > Saxony > Dresden (0.04)
- North America > United States (0.04)
- (2 more...)
- Health & Medicine > Therapeutic Area > Oncology (1.00)
- Health & Medicine > Diagnostic Medicine > Imaging (1.00)
SemiSegECG: A Multi-Dataset Benchmark for Semi-Supervised Semantic Segmentation in ECG Delineation
Park, Minje, Lim, Jeonghwa, Yu, Taehyung, Joo, Sunghoon
Electrocardiogram (ECG) delineation, the segmentation of meaningful waveform features, is critical for clinical diagnosis. Despite recent advances using deep learning, progress has been limited by the scarcity of publicly available annotated datasets. Semi-supervised learning presents a promising solution by leveraging abundant unlabeled ECG data. In this study, we present SemiSegECG, the first systematic benchmark for semi-supervised semantic segmentation (SemiSeg) in ECG delineation. We curated and unified multiple public datasets, including previously underused sources, to support robust and diverse evaluation. We adopted five representative SemiSeg algorithms from computer vision, implemented them on two different architectures: the convolutional network and the transformer, and evaluated them in two different settings: in-domain and cross-domain. Additionally, we propose ECG-specific training configurations and augmentation strategies and introduce a standardized evaluation framework. Our results show that the transformer outperforms the convolutional network in semi-supervised ECG delineation. We anticipate that SemiSegECG will serve as a foundation for advancing semi-supervised ECG delineation methods and will facilitate further research in this domain.
Urban delineation through the lens of commute networks: Leveraging graph embeddings to distinguish socioeconomic groups in cities
Khulbe, Devashish, Sobolevsky, Stanislav
Delineating areas within metropolitan regions stands as an important focus among urban researchers, shedding light on the urban perimeters shaped by evolving population dynamics. Applications to urban science are numerous, from facilitating comparisons between delineated districts and administrative divisions to informing policymakers of the shifting economic and labor landscapes. In this study, we propose using commute networks sourced from the census for the purpose of urban delineation, by modeling them with a Graph Neural Network (GNN) architecture. We derive low-dimensional representations of granular urban areas (nodes) using GNNs. Subsequently, nodes' embeddings are clustered to identify spatially cohesive communities in urban areas. Our experiments across the U.S. demonstrate the effectiveness of network embeddings in capturing significant socioeconomic disparities between communities in various cities, particularly in factors such as median household income. The role of census mobility data in regional delineation is also noted, and we establish the utility of GNNs in urban community detection, as a powerful alternative to existing methods in this domain. The results offer insights into the wider effects of commute networks and their use in building meaningful representations of urban regions.
- North America > United States > Illinois > Cook County > Chicago (0.06)
- North America > United States > California > Los Angeles County > Los Angeles (0.05)
- North America > United States > California > San Diego County > San Diego (0.04)
- (11 more...)
- Health & Medicine (0.68)
- Government > Regional Government (0.46)
U-R-VEDA: Integrating UNET, Residual Links, Edge and Dual Attention, and Vision Transformer for Accurate Semantic Segmentation of CMRs
Mukisa, Racheal, Bansal, Arvind K.
Artificial intelligence, including deep learning models, will play a transformative role in automated medical image analysis for the diagnosis of cardiac disorders and their management. Automated accurate delineation of cardiac images is the first necessary initial step for the quantification and automated diagnosis of cardiac disorders. In this paper, we propose a deep learning based enhanced UNet model, U-R-Veda, which integrates convolution transformations, vision transformer, residual links, channel-attention, and spatial attention, together with edge-detection based skip-connections for an accurate fully-automated semantic segmentation of cardiac magnetic resonance (CMR) images. The model extracts local-features and their interrelationships using a stack of combination convolution blocks, with embedded channel and spatial attention in the convolution block, and vision transformers. Deep embedding of channel and spatial attention in the convolution block identifies important features and their spatial localization. The combined edge information with channel and spatial attention as skip connection reduces information-loss during convolution transformations. The overall model significantly improves the semantic segmentation of CMR images necessary for improved medical image analysis. An algorithm for the dual attention module (channel and spatial attention) has been presented. Performance results show that U-R-Veda achieves an average accuracy of 95.2%, based on DSC metrics. The model outperforms the accuracy attained by other models, based on DSC and HD metrics, especially for the delineation of right-ventricle and left-ventricle-myocardium.
- Europe > Switzerland (0.04)
- North America > United States > Ohio > Portage County > Kent (0.04)
- North America > United States > New York (0.04)
- (2 more...)
- Health & Medicine > Therapeutic Area > Cardiology/Vascular Diseases (1.00)
- Health & Medicine > Diagnostic Medicine > Imaging (1.00)