Feng, Aosong
MTBench: A Multimodal Time Series Benchmark for Temporal Reasoning and Question Answering
Chen, Jialin, Feng, Aosong, Zhao, Ziyu, Garza, Juan, Nurbek, Gaukhar, Qin, Cheng, Maatouk, Ali, Tassiulas, Leandros, Gao, Yifeng, Ying, Rex
Understanding the relationship between textual news and time-series evolution is a critical yet under-explored challenge in applied data science. While multimodal learning has gained traction, existing multimodal time-series datasets fall short in evaluating cross-modal reasoning and complex question answering, which are essential for capturing complex interactions between narrative information and temporal patterns. To bridge this gap, we introduce Multimodal Time Series Benchmark (MTBench), a large-scale benchmark designed to evaluate large language models (LLMs) on time series and text understanding across financial and weather domains. MTbench comprises paired time series and textual data, including financial news with corresponding stock price movements and weather reports aligned with historical temperature records. Unlike existing benchmarks that focus on isolated modalities, MTbench provides a comprehensive testbed for models to jointly reason over structured numerical trends and unstructured textual narratives. The richness of MTbench enables formulation of diverse tasks that require a deep understanding of both text and time-series data, including time-series forecasting, semantic and technical trend analysis, and news-driven question answering (QA). These tasks target the model's ability to capture temporal dependencies, extract key insights from textual context, and integrate cross-modal information. We evaluate state-of-the-art LLMs on MTbench, analyzing their effectiveness in modeling the complex relationships between news narratives and temporal patterns. Our findings reveal significant challenges in current models, including difficulties in capturing long-term dependencies, interpreting causality in financial and weather trends, and effectively fusing multimodal information.
MindLLM: A Subject-Agnostic and Versatile Model for fMRI-to-Text Decoding
Qiu, Weikang, Huang, Zheng, Hu, Haoyu, Feng, Aosong, Yan, Yujun, Ying, Rex
Decoding functional magnetic resonance imaging (fMRI) signals into text has been a key challenge in the neuroscience community, with the potential to advance brain-computer interfaces and uncover deeper insights into brain mechanisms. However, existing approaches often struggle with suboptimal predictive performance, limited task variety, and poor generalization across subjects. In response to this, we propose MindLLM, a model designed for subject-agnostic and versatile fMRI-to-text decoding. MindLLM consists of an fMRI encoder and an off-the-shelf LLM. The fMRI encoder employs a neuroscience-informed attention mechanism, which is capable of accommodating subjects with varying input shapes and thus achieves high-performance subject-agnostic decoding. Moreover, we introduce Brain Instruction Tuning (BIT), a novel approach that enhances the model's ability to capture diverse semantic representations from fMRI signals, facilitating more versatile decoding. We evaluate MindLLM on comprehensive fMRI-to-text benchmarks. Results demonstrate that our model outperforms the baselines, improving downstream tasks by 12.0%, unseen subject generalization by 16.4%, and novel task adaptation by 25.0%. Furthermore, the attention patterns in MindLLM provide interpretable insights into its decision-making process.
Long Sequence Modeling with Attention Tensorization: From Sequence to Tensor Learning
Feng, Aosong, Ying, Rex, Tassiulas, Leandros
As the demand for processing extended textual data grows, the ability to handle long-range dependencies and maintain computational efficiency is more critical than ever. One of the key issues for long-sequence modeling using attention-based model is the mismatch between the limited-range modeling power of full attention and the long-range token dependency in the input sequence. In this work, we propose to scale up the attention receptive field by tensorizing long input sequences into compact tensor representations followed by attention on each transformed dimension. The resulting Tensorized Attention can be adopted as efficient transformer backbones to extend input context length with improved memory and time efficiency. We show that the proposed attention tensorization encodes token dependencies as a multi-hop attention process, and is equivalent to Kronecker decomposition of full attention. Extensive experiments show that tensorized attention can be used to adapt pretrained LLMs with improved efficiency. Notably, Llama-8B with tensorization is trained under 32,768 context length and can steadily extrapolate to 128k length during inference with $11\times$ speedup, compared to full attention with FlashAttention-2.
Graphusion: A RAG Framework for Knowledge Graph Construction with a Global Perspective
Yang, Rui, Yang, Boming, Feng, Aosong, Ouyang, Sixun, Blum, Moritz, She, Tianwei, Jiang, Yuang, Lecue, Freddy, Lu, Jinghui, Li, Irene
Knowledge Graphs (KGs) are crucial in the field of artificial intelligence and are widely used in downstream tasks, such as question-answering (QA). The construction of KGs typically requires significant effort from domain experts. Large Language Models (LLMs) have recently been used for Knowledge Graph Construction (KGC). However, most existing approaches focus on a local perspective, extracting knowledge triplets from individual sentences or documents, missing a fusion process to combine the knowledge in a global KG. This work introduces Graphusion, a zero-shot KGC framework from free text. It contains three steps: in Step 1, we extract a list of seed entities using topic modeling to guide the final KG includes the most relevant entities; in Step 2, we conduct candidate triplet extraction using LLMs; in Step 3, we design the novel fusion module that provides a global view of the extracted knowledge, incorporating entity merging, conflict resolution, and novel triplet discovery. Results show that Graphusion achieves scores of 2.92 and 2.37 out of 3 for entity extraction and relation recognition, respectively. Moreover, we showcase how Graphusion could be applied to the Natural Language Processing (NLP) domain and validate it in an educational scenario. Specifically, we introduce TutorQA, a new expert-verified benchmark for QA, comprising six tasks and a total of 1,200 QA pairs. Using the Graphusion-constructed KG, we achieve a significant improvement on the benchmark, for example, a 9.2% accuracy improvement on sub-graph completion.
Hyperbolic Fine-tuning for Large Language Models
Yang, Menglin, Feng, Aosong, Xiong, Bo, Liu, Jihong, King, Irwin, Ying, Rex
Large language models (LLMs) have demonstrated remarkable performance on various tasks. However, it remains an open question whether the default Euclidean space is the most suitable choice for embedding tokens in LLMs. In this study, we first investigate the non-Euclidean characteristics of LLMs. Our findings reveal that token frequency follows a power-law distribution, with high-frequency tokens clustering near the origin and low-frequency tokens positioned farther away. Additionally, token embeddings exhibit a high degree of hyperbolicity, indicating a latent tree-like structure in the embedding space. Building on the observation, we propose to efficiently fine-tune LLMs in hyperbolic space to better exploit the underlying complex structures. However, we found that this fine-tuning in hyperbolic space cannot be achieved with naive application of exponential and logarithmic maps, when the embedding and weight matrices both reside in Euclidean space. To address this technique issue, we introduce a new method called hyperbolic low-rank efficient fine-tuning, HypLoRA, that performs low-rank adaptation directly on the hyperbolic manifold, avoiding the cancellation effect caused by the exponential and logarithmic maps, thus preserving the hyperbolic modeling capabilities. Through extensive experiments, we demonstrate that HypLoRA significantly enhances the performance of LLMs on reasoning tasks, particularly for complex reasoning problems. In particular, HypLoRA improves the performance in the complex AQuA dataset by up to 13.0%, showcasing its effectiveness in handling complex reasoning challenges
Graphusion: Leveraging Large Language Models for Scientific Knowledge Graph Fusion and Construction in NLP Education
Yang, Rui, Yang, Boming, Ouyang, Sixun, She, Tianwei, Feng, Aosong, Jiang, Yuang, Lecue, Freddy, Lu, Jinghui, Li, Irene
Knowledge graphs (KGs) are crucial in the field of artificial intelligence and are widely applied in downstream tasks, such as enhancing Question Answering (QA) systems. The construction of KGs typically requires significant effort from domain experts. Recently, Large Language Models (LLMs) have been used for knowledge graph construction (KGC), however, most existing approaches focus on a local perspective, extracting knowledge triplets from individual sentences or documents. In this work, we introduce Graphusion, a zero-shot KGC framework from free text. The core fusion module provides a global view of triplets, incorporating entity merging, conflict resolution, and novel triplet discovery. We showcase how Graphusion could be applied to the natural language processing (NLP) domain and validate it in the educational scenario. Specifically, we introduce TutorQA, a new expert-verified benchmark for graph reasoning and QA, comprising six tasks and a total of 1,200 QA pairs. Our evaluation demonstrates that Graphusion surpasses supervised baselines by up to 10% in accuracy on link prediction. Additionally, it achieves average scores of 2.92 and 2.37 out of 3 in human evaluations for concept entity extraction and relation recognition, respectively.
DTGB: A Comprehensive Benchmark for Dynamic Text-Attributed Graphs
Zhang, Jiasheng, Chen, Jialin, Yang, Menglin, Feng, Aosong, Liang, Shuang, Shao, Jie, Ying, Rex
Dynamic text-attributed graphs (DyTAGs) are prevalent in various real-world scenarios, where each node and edge are associated with text descriptions, and both the graph structure and text descriptions evolve over time. Despite their broad applicability, there is a notable scarcity of benchmark datasets tailored to DyTAGs, which hinders the potential advancement in many research fields. To address this gap, we introduce Dynamic Text-attributed Graph Benchmark (DTGB), a collection of large-scale, time-evolving graphs from diverse domains, with nodes and edges enriched by dynamically changing text attributes and categories. To facilitate the use of DTGB, we design standardized evaluation procedures based on four real-world use cases: future link prediction, destination node retrieval, edge classification, and textual relation generation. These tasks require models to understand both dynamic graph structures and natural language, highlighting the unique challenges posed by DyTAGs. Moreover, we conduct extensive benchmark experiments on DTGB, evaluating 7 popular dynamic graph learning algorithms and their variants of adapting to text attributes with LLM embeddings, along with 6 powerful large language models (LLMs). Our results show the limitations of existing models in handling DyTAGs. Our analysis also demonstrates the utility of DTGB in investigating the incorporation of structural and textual dynamics. The proposed DTGB fosters research on DyTAGs and their broad applications. It offers a comprehensive benchmark for evaluating and advancing models to handle the interplay between dynamic graph structures and natural language. The dataset and source code are available at https://github.com/zjs123/DTGB.
From Similarity to Superiority: Channel Clustering for Time Series Forecasting
Chen, Jialin, Lenssen, Jan Eric, Feng, Aosong, Hu, Weihua, Fey, Matthias, Tassiulas, Leandros, Leskovec, Jure, Ying, Rex
Time series forecasting has attracted significant attention in recent decades. Previous studies have demonstrated that the Channel-Independent (CI) strategy improves forecasting performance by treating different channels individually, while it leads to poor generalization on unseen instances and ignores potentially necessary interactions between channels. Conversely, the Channel-Dependent (CD) strategy mixes all channels with even irrelevant and indiscriminate information, which, however, results in oversmoothing issues and limits forecasting accuracy. There is a lack of channel strategy that effectively balances individual channel treatment for improved forecasting performance without overlooking essential interactions between channels. Motivated by our observation of a correlation between the time series model's performance boost against channel mixing and the intrinsic similarity on a pair of channels, we developed a novel and adaptable Channel Clustering Module (CCM). CCM dynamically groups channels characterized by intrinsic similarities and leverages cluster identity instead of channel identity, combining the best of CD and CI worlds. Extensive experiments on real-world datasets demonstrate that CCM can (1) boost the performance of CI and CD models by an average margin of 2.4% and 7.2% on long-term and short-term forecasting, respectively; (2) enable zero-shot forecasting with mainstream time series forecasting models; (3) uncover intrinsic time series patterns among channels and improve interpretability of complex time series models.
Solving General Noisy Inverse Problem via Posterior Sampling: A Policy Gradient Viewpoint
Tang, Haoyue, Xie, Tian, Feng, Aosong, Wang, Hanyu, Zhang, Chenyang, Bai, Yang
Solving image inverse problems (e.g., super-resolution and inpainting) requires generating a high fidelity image that matches the given input (the low-resolution image or the masked image). By using the input image as guidance, we can leverage a pretrained diffusion generative model to solve a wide range of image inverse tasks without task specific model fine-tuning. To precisely estimate the guidance score function of the input image, we propose Diffusion Policy Gradient (DPG), a tractable computation method by viewing the intermediate noisy images as policies and the target image as the states selected by the policy. Experiments show that our method is robust to both Gaussian and Poisson noise degradation on multiple linear and non-linear inverse tasks, resulting into a higher image restoration quality on FFHQ, ImageNet and LSUN datasets.
Efficient High-Resolution Time Series Classification via Attention Kronecker Decomposition
Feng, Aosong, Chen, Jialin, Garza, Juan, Berry, Brooklyn, Salazar, Francisco, Gao, Yifeng, Ying, Rex, Tassiulas, Leandros
The high-resolution time series classification problem is essential due to the increasing availability of detailed temporal data in various domains. To tackle this challenge effectively, it is imperative that the state-of-the-art attention model is scalable to accommodate the growing sequence lengths typically encountered in high-resolution time series data, while also demonstrating robustness in handling the inherent noise prevalent in such datasets. To address this, we propose to hierarchically encode the long time series into multiple levels based on the interaction ranges. By capturing relationships at different levels, we can build more robust, expressive, and efficient models that are capable of capturing both short-term fluctuations and long-term trends in the data. We then propose a new time series transformer backbone (KronTime) by introducing Kronecker-decomposed attention to process such multi-level time series, which sequentially calculates attention from the lower level to the upper level. Experiments on four long time series datasets demonstrate superior classification results with improved efficiency compared to baseline methods.