Identifying immune checkpoint inhibitor (ICI) studies in genomic repositories like Gene Expression Omnibus (GEO) is vital for cancer research yet remains challenging due to semantic ambiguity, extreme class imbalance, and limited labeled data in low-resource settings. We present ProtoBERT-LoRA, a hybrid framework that combines PubMedBERT with prototypical networks and Low-Rank Adaptation (LoRA) for efficient fine-tuning. The model enforces class-separable embeddings via episodic prototype training while preserving biomedical domain knowledge. Our dataset was divided as: Training (20 positive, 20 negative), Prototype Set (10 positive, 10 negative), Validation (20 positive, 200 negative), and Test (71 positive, 765 negative). Evaluated on test dataset, ProtoBERT-LoRA achieved F1-score of 0.624 (precision: 0.481, recall: 0.887), outperforming the rule-based system, machine learning baselines and finetuned PubMedBERT. Application to 44,287 unlabeled studies reduced manual review efforts by 82%. Ablation studies confirmed that combining prototypes with LoRA improved performance by 29% over stand-alone LoRA.

Classical Chinese is a gateway to the rich heritage and wisdom of ancient China, yet its complexities pose formidable comprehension barriers for most modern people without specialized knowledge. While Large Language Models (LLMs) have shown remarkable capabilities in Natural Language Processing (NLP), they struggle with Classical Chinese Understanding (CCU), especially in data-demanding and knowledge-intensive tasks. In response to this dilemma, we propose \textbf{TongGu} (mean understanding ancient and modern), the first CCU-specific LLM, underpinned by three core contributions. First, we construct a two-stage instruction-tuning dataset ACCN-INS derived from rich classical Chinese corpora, aiming to unlock the full CCU potential of LLMs. Second, we propose Redundancy-Aware Tuning (RAT) to prevent catastrophic forgetting, enabling TongGu to acquire new capabilities while preserving its foundational knowledge. Third, we present a CCU Retrieval-Augmented Generation (CCU-RAG) technique to reduce hallucinations based on knowledge-grounding. Extensive experiments across 24 diverse CCU tasks validate TongGu's superior ability, underscoring the effectiveness of RAT and CCU-RAG. The model and dataset will be public available.

Fact knowledge memorization is crucial for Large Language Models (LLM) to generate factual and reliable responses. However, the behaviors of LLM fact memorization remain under-explored. In this paper, we analyze the scaling laws for LLM's fact knowledge and LLMs' behaviors of memorizing different types of facts. We find that LLMs' fact knowledge capacity has a linear and negative exponential law relationship with model size and training epochs, respectively. Estimated by the built scaling law, memorizing the whole Wikidata's facts requires training an LLM with 1000B non-embed parameters for 100 epochs, suggesting that using LLMs to memorize all public facts is almost implausible for a general pre-training setting. Meanwhile, we find that LLMs can generalize on unseen fact knowledge and its scaling law is similar to general pre-training. Additionally, we analyze the compatibility and preference of LLMs' fact memorization. For compatibility, we find LLMs struggle with memorizing redundant facts in a unified way. Only when correlated facts have the same direction and structure, the LLM can compatibly memorize them. This shows the inefficiency of LLM memorization for redundant facts. For preference, the LLM pays more attention to memorizing more frequent and difficult facts, and the subsequent facts can overwrite prior facts' memorization, which significantly hinders low-frequency facts memorization. Our findings reveal the capacity and characteristics of LLMs' fact knowledge learning, which provide directions for LLMs' fact knowledge augmentation.

This paper embarks on an exploration into the Large Language Model (LLM) datasets, which play a crucial role in the remarkable advancements of LLMs. The datasets serve as the foundational infrastructure analogous to a root system that sustains and nurtures the development of LLMs. Consequently, examination of these datasets emerges as a critical topic in research. In order to address the current lack of a comprehensive overview and thorough analysis of LLM datasets, and to gain insights into their current status and future trends, this survey consolidates and categorizes the fundamental aspects of LLM datasets from five perspectives: (1) Pre-training Corpora; (2) Instruction Fine-tuning Datasets; (3) Preference Datasets; (4) Evaluation Datasets; (5) Traditional Natural Language Processing (NLP) Datasets. The survey sheds light on the prevailing challenges and points out potential avenues for future investigation. Additionally, a comprehensive review of the existing available dataset resources is also provided, including statistics from 444 datasets, covering 8 language categories and spanning 32 domains. Information from 20 dimensions is incorporated into the dataset statistics. The total data size surveyed surpasses 774.5 TB for pre-training corpora and 700M instances for other datasets. We aim to present the entire landscape of LLM text datasets, serving as a comprehensive reference for researchers in this field and contributing to future studies. Related resources are available at: https://github.com/lmmlzn/Awesome-LLMs-Datasets.

Visual information extraction (VIE) has attracted increasing attention in recent years. The existing methods usually first organized optical character recognition (OCR) results into plain texts and then utilized token-level entity annotations as supervision to train a sequence tagging model. However, it expends great annotation costs and may be exposed to label confusion, and the OCR errors will also significantly affect the final performance. In this paper, we propose a unified weakly-supervised learning framework called TCPN (Tag, Copy or Predict Network), which introduces 1) an efficient encoder to simultaneously model the semantic and layout information in 2D OCR results; 2) a weakly-supervised training strategy that utilizes only key information sequences as supervision; and 3) a flexible and switchable decoder which contains two inference modes: one (Copy or Predict Mode) is to output key information sequences of different categories by copying a token from the input or predicting one in each time step, and the other (Tag Mode) is to directly tag the input sequence in a single forward pass. Our method shows new state-of-the-art performance on several public benchmarks, which fully proves its effectiveness.

In autonomous navigation, a planning system reasons about other agents to plan a safe and plausible trajectory. Before planning starts, agents are typically processed with computationally intensive models for recognition, tracking, motion estimation and prediction. With limited computational resources and a large number of agents to process in real time, it becomes important to efficiently rank agents according to their impact on the decision making process. This allows spending more time processing the most important agents. We propose a system to rank agents around an autonomous vehicle (AV) in real time. We automatically generate a ranking data set by running the planner in simulation on real-world logged data, where we can afford to run more accurate and expensive models on all the agents. The causes of various planner actions are logged and used for assigning ground truth importance scores. The generated data set can be used to learn ranking models. In particular, we show the utility of combining learned features, via a convolutional neural network, with engineered features designed to capture domain knowledge. We show the benefits of various design choices experimentally. When tested on real AVs, our system demonstrates the capability of understanding complex driving situations.