G2{\Phi}net: Relating Genotype and Biomechanical Phenotype of Tissues with Deep Learning
Zhang, Enrui, Spronck, Bart, Humphrey, Jay D., Karniadakis, George Em
–arXiv.org Artificial Intelligence
In many of these cases, mutationrelated changes in vascular composition and biomechanical properties play key roles in both disease initiation and progression. Consequently, considerable attention continues to be devoted to comparing histomechanical properties of vessels from affected humans and animal models against those of age-and sex-matched healthy controls. Such information can provide insight into these diseases and their overall consequences on the cardiovascular system. Mouse models have emerged as particularly important in the study of genetically triggered vascular diseases for multiple reasons, including the now routine genetic manipulations in mice as well as their short gestational period, the availability of antibodies for biological assays, and the feasibility of miniaturized instrumentation for both in vivo and ex vivo assessments. Among others, we developed custom computer-controlled devices for biomechanically phenotyping murine arteries [1, 2] and identified protocols that ensure robust parameter estimations [3, 4, 5]. Findings have revealed, for example, graduated decreases in elastic energy storage capacity in cases of increasingly severe elastopathies and progressive increases in circumferential material stiffness in enlarging thoracic aortic aneurysms [6, 7]. Although microstructurally motivated, existing constitutive relations based on continuum biomechanics are phenomenological [8]. These models cannot directly relate the mechanical behavior with either the genotype or the precise microstructure of the arterial walls. They similarly cannot delineate or predict contributions of the myriad proteins, glycoproteins, and glycosaminoglycans that constitute the arterial wall in health and disease, and cannot characterize the genotype that determines the constituents of the wall and associated biomechanical properties.
arXiv.org Artificial Intelligence
Aug-21-2022
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