Forecasting COVID-19 Counts At A Single Hospital: A Hierarchical Bayesian Approach

Lee, Alexandra Hope, Lymperopoulos, Panagiotis, Cohen, Joshua T., Wong, John B., Hughes, Michael C.

arXiv.org Machine Learning 

We consider the problem of forecasting the daily number of hospitalized COVID-19 patients at a single hospital site, in order to help administrators with logistics and planning. We develop several candidate hierarchical Bayesian models which directly capture the count nature of data via a generalized Poisson likelihood, model time-series dependencies via autoregressive and Gaussian process latent processes, and can share statistical strength across related sites. We demonstrate our approach on public datasets for 8 hospitals in Massachusetts, U.S.A. and 10 hospitals in the United Kingdom. Further prospective evaluation compares our approach favorably to baselines currently used by stakeholders at 3 related hospitals to forecast 2-week-ahead demand by rescaling state-level forecasts. The COVID-19 pandemic has created unprecedented demand for limited hospital resources across the globe. Emergency resource allocation decisions made by hospital administrators (such as planning additional personnel or provisioning beds and equipment) are crucial for achieving successful patient outcomes and avoiding overwhelmed capacity. However, at present hospitals often lack the ability to forecast what will be needed at their site in coming weeks. This may be especially true in under-resourced hospitals, due to constraints on funding, staff time and expertise, and other issues.

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