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 Bayesian Inference


Evaluating uncertainties in electrochemical impedance spectra of solid oxide fuel cells

arXiv.org Machine Learning

Electrochemical impedance spectra is a widely used tool for characterization of fuel cells and electrochemical conversion systems in general. When applied to the on-line monitoring in context of in-field applications, the disturbances, drifts and sensor noise may cause severe distortions in the evaluated spectra, especially in the low-frequency part. Failure to account for the random effects can implicate difficulties in interpreting the spectra and misleading diagnostic reasoning. In the literature, this fact has been largely ignored. In this paper, we propose a computationally efficient approach to the quantification of the spectral uncertainty by quantifying the uncertainty of the equivalent circuit model (ECM) parameters by means of the Variational Bayes (VB) approach. To assess the quality of the VB posterior estimates, we compare the results of VB approach with those obtained with the Markov Chain Monte Carlo (MCMC) algorithm. Namely, MCMC algorithm is expected to return accurate posterior distributions, while VB approach provides the approximative distributions. By using simulated and real data we show that VB approach generates approximations, which although slightly over-optimistic, are still pretty close to the more realistic MCMC estimates. A great advantage of the VB method for online monitoring is low computational load, which is several orders of magnitude lighter than that of MCMC. The performance of VB algorithm is demonstrated on a case of ECM parameters estimation in a 6 cell solid-oxide fuel cell stack. The complete numerical implementation for recreating the results can be found at https://repo.ijs.si/lznidaric/variational-bayes-supplementary-material.


A Survey on the Explainability of Supervised Machine Learning

Journal of Artificial Intelligence Research

Predictions obtained by, e.g., artificial neural networks have a high accuracy but humans often perceive the models as black boxes. Insights about the decision making are mostly opaque for humans. Particularly understanding the decision making in highly sensitive areas such as healthcare or finance, is of paramount importance. The decision-making behind the black boxes requires it to be more transparent, accountable, and understandable for humans. This survey paper provides essential definitions, an overview of the different principles and methodologies of explainable Supervised Machine Learning (SML). We conduct a state-of-the-art survey that reviews past and recent explainable SML approaches and classifies them according to the introduced definitions. Finally, we illustrate principles by means of an explanatory case study and discuss important future directions.


Obsolete Personal Information Update System for the Prevention of Falls among Elderly Patients

arXiv.org Artificial Intelligence

Falls are a common problem affecting the older adults and a major public health issue. Centers for Disease Control and Prevention, and World Health Organization report that one in three adults over the age of 65 and half of the adults over 80 fall each year. In recent years, an ever-increasing range of applications have been developed to help deliver more effective falls prevention interventions. All these applications rely on a huge elderly personal database collected from hospitals, mutual health, and other organizations in caring for elderly. The information describing an elderly is continually evolving and may become obsolete at a given moment and contradict what we already know on the same person. So, it needs to be continuously checked and updated in order to restore the database consistency and then provide better service. This paper provides an outline of an Obsolete personal Information Update System (OIUS) designed in the context of the elderly-fall prevention project. Our OIUS aims to control and update in real-time the information acquired about each older adult, provide on-demand consistent information and supply tailored interventions to caregivers and fall-risk patients. The approach outlined for this purpose is based on a polynomial-time algorithm build on top of a causal Bayesian network representing the elderly data. The result is given as a recommendation tree with some accuracy level. We conduct a thorough empirical study for such a model on an elderly personal information base. Experiments confirm the viability and effectiveness of our OIUS.


Scalable Optimization for Wind Farm Control using Coordination Graphs

arXiv.org Artificial Intelligence

Wind farms are a crucial driver toward the generation of ecological and renewable energy. Due to their rapid increase in capacity, contemporary wind farms need to adhere to strict constraints on power output to ensure stability of the electricity grid. Specifically, a wind farm controller is required to match the farm's power production with a power demand imposed by the grid operator. This is a non-trivial optimization problem, as complex dependencies exist between the wind turbines. State-of-the-art wind farm control typically relies on physics-based heuristics that fail to capture the full load spectrum that defines a turbine's health status. When this is not taken into account, the long-term viability of the farm's turbines is put at risk. Given the complex dependencies that determine a turbine's lifetime, learning a flexible and optimal control strategy requires a data-driven approach. However, as wind farms are large-scale multi-agent systems, optimizing control strategies over the full joint action space is intractable. We propose a new learning method for wind farm control that leverages the sparse wind farm structure to factorize the optimization problem. Using a Bayesian approach, based on multi-agent Thompson sampling, we explore the factored joint action space for configurations that match the demand, while considering the lifetime of turbines. We apply our method to a grid-like wind farm layout, and evaluate configurations using a state-of-the-art wind flow simulator. Our results are competitive with a physics-based heuristic approach in terms of demand error, while, contrary to the heuristic, our method prolongs the lifetime of high-risk turbines.


Selection of Summary Statistics for Network Model Choice with Approximate Bayesian Computation

arXiv.org Machine Learning

Approximate Bayesian Computation (ABC) now serves as one of the major strategies to perform model choice and parameter inference on models with intractable likelihoods. An essential component of ABC involves comparing a large amount of simulated data with the observed data through summary statistics. To avoid the curse of dimensionality, summary statistic selection is of prime importance, and becomes even more critical when applying ABC to mechanistic network models. Indeed, while many summary statistics can be used to encode network structures, their computational complexity can be highly variable. For large networks, computation of summary statistics can quickly create a bottleneck, making the use of ABC difficult. To reduce this computational burden and make the analysis of mechanistic network models more practical, we investigated two questions in a model choice framework. First, we studied the utility of cost-based filter selection methods to account for different summary costs during the selection process. Second, we performed selection using networks generated with a smaller number of nodes to reduce the time required for the selection step. Our findings show that computationally inexpensive summary statistics can be efficiently selected with minimal impact on classification accuracy. Furthermore, we found that networks with a smaller number of nodes can only be employed to eliminate a moderate number of summaries. While this latter finding is network specific, the former is general and can be adapted to any ABC application.


Estimating and Evaluating Regression Predictive Uncertainty in Deep Object Detectors

arXiv.org Machine Learning

Predictive uncertainty estimation is an essential next step for the reliable deployment of deep object detectors in safety-critical tasks. In this work, we focus on estimating predictive distributions for bounding box regression output with variance networks. We show that in the context of object detection, training variance networks with negative log likelihood (NLL) can lead to high entropy predictive distributions regardless of the correctness of the output mean. We propose to use the energy score as a non-local proper scoring rule and find that when used for training, the energy score leads to better calibrated and lower entropy predictive distributions than NLL. We also address the widespread use of non-proper scoring metrics for evaluating predictive distributions from deep object detectors by proposing an alternate evaluation approach founded on proper scoring rules. Using the proposed evaluation tools, we show that although variance networks can be used to produce high quality predictive distributions, adhoc approaches used by seminal object detectors for choosing regression targets during training do not provide wide enough data support for reliable variance learning. We hope that our work helps shift evaluation in probabilistic object detection to better align with predictive uncertainty evaluation in other machine learning domains. Deep object detectors are being increasingly deployed as perception components in safety critical robotics and automation applications. For reliable and safe operation, subsequent tasks using detectors as sensors require meaningful predictive uncertainty estimates correlated with their outputs. As an example, overconfident incorrect predictions can lead to non-optimal decision making in planning tasks, while underconfident correct predictions can lead to under-utilizing information in sensor fusion. This paper investigates probabilistic object detectors, extensions of standard object detectors that estimate predictive distributions for output categories and bounding boxes simultaneously. This paper aims to identify the shortcomings of recent trends followed by state-of-the-art probabilistic object detectors, and proposes to provide theoretically founded solutions for identified issues.


Data Obsolescence Detection in the Light of Newly Acquired Valid Observations

arXiv.org Artificial Intelligence

The information describing the conditions of a system or a person is constantly evolving and may become obsolete and contradict other information. A database, therefore, must be consistently updated upon the acquisition of new valid observations that contradict obsolete ones contained in the database. In this paper, we propose a novel approach for dealing with the information obsolescence problem. Our approach aims to detect, in real-time, contradictions between observations and then identify the obsolete ones, given a representation model. Since we work within an uncertain environment characterized by the lack of information, we choose to use a Bayesian network as our representation model and propose a new approximate concept, $\epsilon$-Contradiction. The new concept is parameterised by a confidence level of having a contradiction in a set of observations. We propose a polynomial-time algorithm for detecting obsolete information. We show that the resulting obsolete information is better represented by an AND-OR tree than a simple set of observations. Finally, we demonstrate the effectiveness of our approach on a real elderly fall-prevention database and showcase how this tree can be used to give reliable recommendations to doctors. Our experiments give systematically and substantially very good results.


Inference for BART with Multinomial Outcomes

arXiv.org Machine Learning

The multinomial probit Bayesian additive regression trees (MPBART) framework was proposed by Kindo et al. (KD), approximating the latent utilities in the multinomial probit (MNP) model with BART (Chipman et al. 2010). Compared to multinomial logistic models, MNP does not assume independent alternatives and the correlation structure among alternatives can be specified through multivariate Gaussian distributed latent utilities. We introduce two new algorithms for fitting the MPBART and show that the theoretical mixing rates of our proposals are equal or superior to the existing algorithm in KD. Through simulations, we explore the robustness of the methods to the choice of reference level, imbalance in outcome frequencies, and the specifications of prior hyperparameters for the utility error term. The work is motivated by the application of generating posterior predictive distributions for mortality and engagement in care among HIV-positive patients based on electronic health records (EHRs) from the Academic Model Providing Access to Healthcare (AMPATH) in Kenya. In both the application and simulations, we observe better performance using our proposals as compared to KD in terms of MCMC convergence rate and posterior predictive accuracy.


Bayesian Inference Forgetting

arXiv.org Machine Learning

The right to be forgotten has been legislated in many countries but the enforcement in machine learning would cause unbearable costs: companies may need to delete whole models trained from massive resources because of single individual requests. Existing works propose to remove the influence of the requested datums on the learned models via its influence function which is no longer naturally well-defined in Bayesian inference. To address this problem, this paper proposes a {\it Bayesian inference forgetting} (BIF) framework to extend the applicable domain to Bayesian inference. In the BIF framework, we develop forgetting algorithms for variational inference and Markov chain Monte Carlo. We show that our algorithms can provably remove the influence of single datums on the learned models. Theoretical analysis demonstrates that our algorithms have guaranteed generalizability. Experiments of Gaussian mixture models on the synthetic dataset and Bayesian neural networks on the Fashion-MNIST dataset verify the feasibility of our methods. The source code package is available at \url{https://github.com/fshp971/BIF}.


Probabilistic Inference for Learning from Untrusted Sources

arXiv.org Artificial Intelligence

Federated learning brings potential benefits of faster learning, better solutions, and a greater propensity to transfer when heterogeneous data from different parties increases diversity. However, because federated learning tasks tend to be large and complex, and training times non-negligible, it is important for the aggregation algorithm to be robust to non-IID data and corrupted parties. This robustness relies on the ability to identify, and appropriately weight, incompatible parties. Recent work assumes that a \textit{reference dataset} is available through which to perform the identification. We consider settings where no such reference dataset is available; rather, the quality and suitability of the parties needs to be \textit{inferred}. We do so by bringing ideas from crowdsourced predictions and collaborative filtering, where one must infer an unknown ground truth given proposals from participants with unknown quality. We propose novel federated learning aggregation algorithms based on Bayesian inference that adapt to the quality of the parties. Empirically, we show that the algorithms outperform standard and robust aggregation in federated learning on both synthetic and real data.