We study the problem of clustering networks whose nodes have imputed or physical positions in a single dimension, for example prestige hierarchies or the similarity dimension of hyperbolic embeddings. Existing algorithms, such as the critical gap method and other greedy strategies, only offer approximate solutions to this problem. Here, we introduce a dynamic programming approach that returns provably optimal solutions in polynomial time -- O(n^2) steps -- for a broad class of clustering objectives. We demonstrate the algorithm through applications to synthetic and empirical networks and show that it outperforms existing heuristics by a significant margin, with a similar execution time.

Networked discrete dynamical systems are often used to model the spread of contagions and decision-making by agents in coordination games. Fixed points of such dynamical systems represent configurations to which the system converges. In the dissemination of undesirable contagions (such as rumors and misinformation), convergence to fixed points with a small number of affected nodes is a desirable goal. Motivated by such considerations, we formulate a novel optimization problem of finding a nontrivial fixed point of the system with the minimum number of affected nodes. We establish that, unless P = NP, there is no polynomial time algorithm for approximating a solution to this problem to within the factor n^1-\epsilon for any constant epsilon > 0. To cope with this computational intractability, we identify several special cases for which the problem can be solved efficiently. Further, we introduce an integer linear program to address the problem for networks of reasonable sizes. For solving the problem on larger networks, we propose a general heuristic framework along with greedy selection methods. Extensive experimental results on real-world networks demonstrate the effectiveness of the proposed heuristics.

This paper investigates new families of compositional optimization problems, called non-smooth weakly-convex finite-sum coupled compositional optimization (NSWC FCCO). There has been a growing interest in FCCO due to its wide-ranging applications in machine learning and AI, as well as its ability to address the shortcomings of stochastic algorithms based on empirical risk minimization. However, current research on FCCO presumes that both the inner and outer functions are smooth, limiting their potential to tackle a more diverse set of problems. Our research expands on this area by examining non-smooth weakly-convex FCCO, where the outer function is weakly convex and non-decreasing, and the inner function is weakly-convex. We analyze a single-loop algorithm and establish its complexity for finding an ϵ-stationary point of the Moreau envelop of the objective function. Additionally, we also extend the algorithm to solving novel non-smooth weakly-convex tri-level finite-sum coupled compositional optimization problems, which feature a nested arrangement of three functions. Lastly, we explore the applications of our algorithms in deep learning for two-way partial AUC maximization and multi-instance two-way partial AUC maximization, using empirical studies to showcase the effectiveness of the proposed algorithms.

This paper studies the joint community detection and phase synchronization problem on the \textit{stochastic block model with relative phase}, where each node is associated with an unknown phase angle. This problem, with a variety of real-world applications, aims to recover the cluster structure and associated phase angles simultaneously. We show this problem exhibits a \textit{``multi-frequency''} structure by closely examining its maximum likelihood estimation (MLE) formulation, whereas existing methods are not originated from this perspective. To this end, two simple yet efficient algorithms that leverage the MLE formulation and benefit from the information across multiple frequencies are proposed. The former is a spectral method based on the novel multi-frequency column-pivoted QR factorization. The factorization applied to the top eigenvectors of the observation matrix provides key information about the cluster structure and associated phase angles. The second approach is an iterative multi-frequency generalized power method, where each iteration updates the estimation in a matrix-multiplication-then-projection manner. Numerical experiments show that our proposed algorithms significantly improve the ability of exactly recovering the cluster structure and the accuracy of the estimated phase angles, compared to state-of-the-art algorithms.

Model-based control requires an accurate model of the system dynamics for precisely and safely controlling the robot in complex and dynamic environments. Moreover, in the presence of variations in the operating conditions, the model should be continuously refined to compensate for dynamics changes. In this paper, we present a self-supervised learning approach that actively models the dynamics of nonlinear robotic systems. We combine offline learning from past experience and online learning from current robot interaction with the unknown environment. These two ingredients enable a highly sample-efficient and adaptive learning process, capable of accurately inferring model dynamics in real-time even in operating regimes that greatly differ from the training distribution. Moreover, we design an uncertainty-aware model predictive controller that is heuristically conditioned to the aleatoric (data) uncertainty of the learned dynamics. This controller actively chooses the optimal control actions that (i) optimize the control performance and (ii) improve the efficiency of online learning sample collection. We demonstrate the effectiveness of our method through a series of challenging real-world experiments using a quadrotor system. Our approach showcases high resilience and generalization capabilities by consistently adapting to unseen flight conditions, while it significantly outperforms classical and adaptive control baselines.

Despite its exceptional soft tissue contrast, Magnetic Resonance Imaging (MRI) faces the challenge of long scanning times compared to other modalities like X-ray radiography. Shortening scanning times is crucial in clinical settings, as it increases patient comfort, decreases examination costs and improves throughput. Recent advances in compressed sensing (CS) and deep learning allow accelerated MRI acquisition by reconstructing high-quality images from undersampled data. While reconstruction algorithms have received most of the focus, designing acquisition trajectories to optimize reconstruction quality remains an open question. This thesis explores two approaches to address this gap in the context of Cartesian MRI. First, we propose two algorithms, lazy LBCS and stochastic LBCS, that significantly improve upon G\"ozc\"u et al.'s greedy learning-based CS (LBCS) approach. These algorithms scale to large, clinically relevant scenarios like multi-coil 3D MR and dynamic MRI, previously inaccessible to LBCS. Additionally, we demonstrate that generative adversarial networks (GANs) can serve as a natural criterion for adaptive sampling by leveraging variance in the measurement domain to guide acquisition. Second, we delve into the underlying structures or assumptions that enable mask design algorithms to perform well in practice. Our experiments reveal that state-of-the-art deep reinforcement learning (RL) approaches, while capable of adaptation and long-horizon planning, offer only marginal improvements over stochastic LBCS, which is neither adaptive nor does long-term planning. Altogether, our findings suggest that stochastic LBCS and similar methods represent promising alternatives to deep RL. They shine in particular by their scalability and computational efficiency and could be key in the deployment of optimized acquisition trajectories in Cartesian MRI.

Reverse engineering deep ReLU networks is a critical problem in understanding the complex behavior and interpretability of neural networks. In this research, we present a novel method for reconstructing deep ReLU networks by leveraging convex optimization techniques and a sampling-based approach. Our method begins by sampling points in the input space and querying the black box model to obtain the corresponding hyperplanes. We then define a convex optimization problem with carefully chosen constraints and conditions to guarantee its convexity. The objective function is designed to minimize the discrepancy between the reconstructed network's output and the target model's output, subject to the constraints. We employ gradient descent to optimize the objective function, incorporating L1 or L2 regularization as needed to encourage sparse or smooth solutions. Our research contributes to the growing body of work on reverse engineering deep ReLU networks and paves the way for new advancements in neural network interpretability and security.

Semantic communication is deemed as a revolution of Shannon's paradigm in the six-generation (6G) wireless networks. It aims at transmitting the extracted information rather than the original data, which receivers will try to recover. Intuitively, the larger extracted information, the longer latency of semantic communication will be. Besides, larger extracted information will result in more accurate reconstructed information, thereby causing a higher utility of the semantic communication system. Shorter latency and higher utility are desirable objectives for the system, so there will be a trade-off between utility and latency. This paper proposes a joint optimization algorithm for total latency and utility. Moreover, security is essential for the semantic communication system. We incorporate the secrecy rate, a physical-layer security method, into the optimization problem. The secrecy rate is the communication rate at which no information is disclosed to an eavesdropper. Experimental results demonstrate that the proposed algorithm obtains the best joint optimization performance compared to the baselines.

The discovery of therapeutics to treat genetically-driven pathologies relies on identifying genes involved in the underlying disease mechanisms. Existing approaches search over the billions of potential interventions to maximize the expected influence on the target phenotype. However, to reduce the risk of failure in future stages of trials, practical experiment design aims to find a set of interventions that maximally change a target phenotype via diverse mechanisms. We propose DiscoBAX, a sample-efficient method for maximizing the rate of significant discoveries per experiment while simultaneously probing for a wide range of diverse mechanisms during a genomic experiment campaign. We provide theoretical guarantees of approximate optimality under standard assumptions, and conduct a comprehensive experimental evaluation covering both synthetic as well as real-world experimental design tasks. DiscoBAX outperforms existing state-of-the-art methods for experimental design, selecting effective and diverse perturbations in biological systems.

Intelligent reflecting surface (IRS)-assisted unmanned aerial vehicle (UAV) communications are expected to alleviate the load of ground base stations in a cost-effective way. Existing studies mainly focus on the deployment and resource allocation of a single IRS instead of multiple IRSs, whereas it is extremely challenging for joint multi-IRS multi-user association in UAV communications with constrained reflecting resources and dynamic scenarios. To address the aforementioned challenges, we propose a new optimization algorithm for joint IRS-user association, trajectory optimization of UAVs, successive interference cancellation (SIC) decoding order scheduling and power allocation to maximize system energy efficiency. We first propose an inverse soft-Q learning-based algorithm to optimize multi-IRS multi-user association. Then, SCA and Dinkelbach-based algorithm are leveraged to optimize UAV trajectory followed by the optimization of SIC decoding order scheduling and power allocation. Finally, theoretical analysis and performance results show significant advantages of the designed algorithm in convergence rate and energy efficiency.