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 Ontologies


Transforming Agriculture with Intelligent Data Management and Insights

arXiv.org Artificial Intelligence

Modern agriculture faces grand challenges to meet increased demands for food, fuel, feed, and fiber with population growth under the constraints of climate change and dwindling natural resources. Data innovation is urgently required to secure and improve the productivity, sustainability, and resilience of our agroecosystems. As various sensors and Internet of Things (IoT) instrumentation become more available, affordable, reliable, and stable, it has become possible to conduct data collection, integration, and analysis at multiple temporal and spatial scales, in real-time, and with high resolutions. At the same time, the sheer amount of data poses a great challenge to data storage and analysis, and the \textit{de facto} data management and analysis practices adopted by scientists have become increasingly inefficient. Additionally, the data generated from different disciplines, such as genomics, phenomics, environment, agronomy, and socioeconomic, can be highly heterogeneous. That is, datasets across disciplines often do not share the same ontology, modality, or format. All of the above make it necessary to design a new data management infrastructure that implements the principles of Findable, Accessible, Interoperable, and Reusable (FAIR). In this paper, we propose Agriculture Data Management and Analytics (ADMA), which satisfies the FAIR principles. Our new data management infrastructure is intelligent by supporting semantic data management across disciplines, interactive by providing various data management/analysis portals such as web GUI, command line, and API, scalable by utilizing the power of high-performance computing (HPC), extensible by allowing users to load their own data analysis tools, trackable by keeping track of different operations on each file, and open by using a rich set of mature open source technologies.


The Music Meta Ontology: a flexible semantic model for the interoperability of music metadata

arXiv.org Artificial Intelligence

The semantic description of music metadata is a key requirement for the creation of music datasets that can be aligned, integrated, and accessed for information retrieval and knowledge discovery. It is nonetheless an open challenge due to the complexity of musical concepts arising from different genres, styles, and periods -- standing to benefit from a lingua franca to accommodate various stakeholders (musicologists, librarians, data engineers, etc.). To initiate this transition, we introduce the Music Meta ontology, a rich and flexible semantic model to describe music metadata related to artists, compositions, performances, recordings, and links. We follow eXtreme Design methodologies and best practices for data engineering, to reflect the perspectives and the requirements of various stakeholders into the design of the model, while leveraging ontology design patterns and accounting for provenance at different levels (claims, links). After presenting the main features of Music Meta, we provide a first evaluation of the model, alignments to other schema (Music Ontology, DOREMUS, Wikidata), and support for data transformation.


OLaLa: Ontology Matching with Large Language Models

arXiv.org Artificial Intelligence

Ontology (and more generally: Knowledge Graph) Matching is a challenging task where information in natural language is one of the most important signals to process. With the rise of Large Language Models, it is possible to incorporate this knowledge in a better way into the matching pipeline. A number of decisions still need to be taken, e.g., how to generate a prompt that is useful to the model, how information in the KG can be formulated in prompts, which Large Language Model to choose, how to provide existing correspondences to the model, how to generate candidates, etc. In this paper, we present a prototype that explores these questions by applying zero-shot and few-shot prompting with multiple open Large Language Models to different tasks of the Ontology Alignment Evaluation Initiative (OAEI). We show that with only a handful of examples and a well-designed prompt, it is possible to achieve results that are en par with supervised matching systems which use a much larger portion of the ground truth.


A Concept for User-Centered Delegation of Abstract High-Level Tasks to Cobots for Flexible Lot Sizes

arXiv.org Artificial Intelligence

Technical advances in collaborative robots (cobots) are making them increasingly attractive to companies. However, many human operators are not trained to program complex machines. Instead, humans are used to communicating with each other on a task-based level rather than through specific instructions, as is common with machines. The gap between low-level instruction-based and high-level task-based communication leads to low values for usability scores of teach pendant programming. As a solution, we propose a task-based interaction concept that allows human operators to delegate a complex task to a machine without programming by specifying a task via triplets. The concept is based on task decomposition and a reasoning system using a cognitive architecture. The approach is evaluated in an industrial use case where mineral cast basins have to be sanded by a cobot in a crafts enterprise.


Ontology-Driven Processing of Transdisciplinary Domain Knowledge

arXiv.org Artificial Intelligence

The monograph discusses certain aspects of modern real-world problems facing humanity, which are much more challenging than scientific ones. Modern science is unable to solve them in a fundamental way. Vernadsky's noosphere thesis, in fact, appeals to the scientific worldview that needs to be built in a way that overcomes the interdisciplinary barriers and increases the effectiveness of interdisciplinary interaction and modern science overall. We are talking about the general transdisciplinary knowledge. In world practice, there is still no systematic methodology and a specific form of generally accepted valid scientific theory that would provide transdisciplinary knowledge. Non-linear interdisciplinary interaction is the standard of evolution of modern science. At the same time, a new transdisciplinary theory (domain of scientific research) is being de facto created and the process is repeated many times: from an individual or group of disciplines, through interdisciplinary interaction, in a direction that brings us closer to creating a holistic general scientific worldview.


Performance Optimization of Deep Learning Sparse Matrix Kernels on Intel Max Series GPU

arXiv.org Artificial Intelligence

In this paper, we focus on three sparse matrix operations that are relevant for machine learning applications, namely, the sparse-dense matrix multiplication (SPMM), the sampled dense-dense matrix multiplication (SDDMM), and the composition of the SDDMM with SPMM, also termed as FusedMM. We develop optimized implementations for SPMM, SDDMM, and FusedMM operations utilizing Intel oneAPI's Explicit SIMD (ESIMD) SYCL extension API. In contrast to CUDA or SYCL, the ESIMD API enables the writing of explicitly vectorized kernel code. Sparse matrix algorithms implemented with the ESIMD API achieved performance close to the peak of the targeted Intel Data Center GPU. We compare our performance results to Intel's oneMKL library on Intel GPUs and to a recent CUDA implementation for the sparse matrix operations on NVIDIA's V100 GPU and demonstrate that our implementations for sparse matrix operations outperform either.


Ontologies for Models and Algorithms in Applied Mathematics and Related Disciplines

arXiv.org Artificial Intelligence

For these types of mathematical research data, the Mathematical Research Data Initiative has developed, merged and implemented ontologies and knowledge graphs. This contributes to making mathematical research data FAIR by introducing semantic technology and documenting the mathematical foundations accordingly. Using the concrete example of microfracture analysis of porous media, it is shown how the knowledge of the underlying mathematical model and the corresponding numerical algorithms for its solution can be represented by the ontologies.


Linked Papers With Code: The Latest in Machine Learning as an RDF Knowledge Graph

arXiv.org Artificial Intelligence

In this paper, we introduce Linked Papers With Code (LPWC), an RDF knowledge graph that provides comprehensive, current information about almost 400,000 machine learning publications. This includes the tasks addressed, the datasets utilized, the methods implemented, and the evaluations conducted, along with their results. Compared to its non-RDF-based counterpart Papers With Code, LPWC not only translates the latest advancements in machine learning into RDF format, but also enables novel ways for scientific impact quantification and scholarly key content recommendation. LPWC is openly accessible at https://linkedpaperswithcode.com and is licensed under CC-BY-SA 4.0. As a knowledge graph in the Linked Open Data cloud, we offer LPWC in multiple formats, from RDF dump files to a SPARQL endpoint for direct web queries, as well as a data source with resolvable URIs and links to the data sources SemOpenAlex, Wikidata, and DBLP. Additionally, we supply knowledge graph embeddings, enabling LPWC to be readily applied in machine learning applications.


Trust, Accountability, and Autonomy in Knowledge Graph-based AI for Self-determination

arXiv.org Artificial Intelligence

Knowledge Graphs (KGs) have emerged as fundamental platforms for powering intelligent decision-making and a wide range of Artificial Intelligence (AI) services across major corporations such as Google, Walmart, and AirBnb. KGs complement Machine Learning (ML) algorithms by providing data context and semantics, thereby enabling further inference and question-answering capabilities. The integration of KGs with neuronal learning (e.g., Large Language Models (LLMs)) is currently a topic of active research, commonly named neuro-symbolic AI. Despite the numerous benefits that can be accomplished with KG-based AI, its growing ubiquity within online services may result in the loss of self-determination for citizens as a fundamental societal issue. The more we rely on these technologies, which are often centralised, the less citizens will be able to determine their own destinies. To counter this threat, AI regulation, such as the European Union (EU) AI Act, is being proposed in certain regions. The regulation sets what technologists need to do, leading to questions concerning: How can the output of AI systems be trusted? What is needed to ensure that the data fuelling and the inner workings of these artefacts are transparent? How can AI be made accountable for its decision-making? This paper conceptualises the foundational topics and research pillars to support KG-based AI for self-determination. Drawing upon this conceptual framework, challenges and opportunities for citizen self-determination are illustrated and analysed in a real-world scenario. As a result, we propose a research agenda aimed at accomplishing the recommended objectives.


GLEN: General-Purpose Event Detection for Thousands of Types

arXiv.org Artificial Intelligence

The progress of event extraction research has been hindered by the absence of wide-coverage, large-scale datasets. To make event extraction systems more accessible, we build a general-purpose event detection dataset GLEN, which covers 205K event mentions with 3,465 different types, making it more than 20x larger in ontology than today's largest event dataset. GLEN is created by utilizing the DWD Overlay, which provides a mapping between Wikidata Qnodes and PropBank rolesets. This enables us to use the abundant existing annotation for PropBank as distant supervision. In addition, we also propose a new multi-stage event detection model CEDAR specifically designed to handle the large ontology size in GLEN. We show that our model exhibits superior performance compared to a range of baselines including InstructGPT. Finally, we perform error analysis and show that label noise is still the largest challenge for improving performance for this new dataset. Our dataset, code, and models are released at \url{https://github.com/ZQS1943/GLEN}.}