This research presents a computational framework for describing and recognizing episodes and for logical reasoning. This framework, named cognitive-logs, consists of a set of relational and graph databases. Cognitive-logs record knowledge, particularly in episodes that consist of "actions" represented by verbs in natural languages and "participants" who perform the actions. These objects are connected by arrows (morphisms) that link each action to its participant and link cause to effect. Operations based on category theory enable comparisons between episodes and deductive inferences, including abstractions of stories. One of the goals of this study is to develop a database-driven artificial intelligence. This artificial intelligence thinks like a human but possesses the accuracy and rigour of a machine. The vast capacities of databases (up to petabyte scales in current technologies) enable the artificial intelligence to store a greater volume of knowledge than neural-network based artificial intelligences. Cognitive-logs serve as a model of human cognition and designed with references to cognitive linguistics. Cognitive-logs also have the potential to model various human mind activities.

Knowledge Organization Systems (KOSs), such as term lists, thesauri, taxonomies, and ontologies, play a fundamental role in categorising, managing, and retrieving information. In the academic domain, KOSs are often adopted for representing research areas and their relationships, primarily aiming to classify research articles, academic courses, patents, books, scientific venues, domain experts, grants, software, experiment materials, and several other relevant products and agents. These structured representations of research areas, widely embraced by many academic fields, have proven effective in empowering AI-based systems to i) enhance retrievability of relevant documents, ii) enable advanced analytic solutions to quantify the impact of academic research, and iii) analyse and forecast research dynamics. This paper aims to present a comprehensive survey of the current KOS for academic disciplines. We analysed and compared 45 KOSs according to five main dimensions: scope, structure, curation, usage, and links to other KOSs. Our results reveal a very heterogeneous scenario in terms of scope, scale, quality, and usage, highlighting the need for more integrated solutions for representing research knowledge across academic fields. We conclude by discussing the main challenges and the most promising future directions.

In the field of biomedical natural language processing, medical concept normalization is a crucial task for accurately mapping mentions of concepts to a large knowledge base. However, this task becomes even more challenging in low-resource settings, where limited data and resources are available. In this thesis, I explore the challenges of medical concept normalization in a low-resource setting. Specifically, I investigate the shortcomings of current medical concept normalization methods applied to German lay texts. Since there is no suitable dataset available, a dataset consisting of posts from a German medical online forum is annotated with concepts from the Unified Medical Language System. The experiments demonstrate that multilingual Transformer-based models are able to outperform string similarity methods. The use of contextual information to improve the normalization of lay mentions is also examined, but led to inferior results. Based on the results of the best performing model, I present a systematic error analysis and lay out potential improvements to mitigate frequent errors.

For optimization models to be used in practice, it is crucial that users trust the results. A key factor in this aspect is the interpretability of the solution process. A previous framework for inherently interpretable optimization models used decision trees to map instances to solutions of the underlying optimization model. Based on this work, we investigate how we can use more general optimization rules to further increase interpretability and at the same time give more freedom to the decision maker. The proposed rules do not map to a concrete solution but to a set of solutions characterized by common features. To find such optimization rules, we present an exact methodology using mixed-integer programming formulations as well as heuristics. We also outline the challenges and opportunities that these methods present. In particular, we demonstrate the improvement in solution quality that our approach offers compared to existing frameworks for interpretable optimization and we discuss the relationship between interpretability and performance. These findings are supported by experiments using both synthetic and real-world data.

What is the next step after the data/digital revolution? What do we need the most to reach this aim? How machines can memorize, learn or discover? What should they be able to do to be qualified as "intelligent"? These questions relate to the next generation "intelligent" machines. Probably, these machines should be able to handle knowledge discovery, decision-making and concepts. In this paper, we will take into account some historical contributions and discuss these different questions through an analogy to human intelligence. Also, a general framework for a concept oriented language will be proposed.

Specifically focusing on the landscape of abstractive text summarization, as opposed to extractive techniques, this survey presents a comprehensive overview, delving into state-of-the-art techniques, prevailing challenges, and prospective research directions. We categorize the techniques into traditional sequence-to-sequence models, pre-trained large language models, reinforcement learning, hierarchical methods, and multi-modal summarization. Unlike prior works that did not examine complexities, scalability and comparisons of techniques in detail, this review takes a comprehensive approach encompassing state-of-the-art methods, challenges, solutions, comparisons, limitations and charts out future improvements - providing researchers an extensive overview to advance abstractive summarization research. We provide vital comparison tables across techniques categorized - offering insights into model complexity, scalability and appropriate applications. The paper highlights challenges such as inadequate meaning representation, factual consistency, controllable text summarization, cross-lingual summarization, and evaluation metrics, among others. Solutions leveraging knowledge incorporation and other innovative strategies are proposed to address these challenges. The paper concludes by highlighting emerging research areas like factual inconsistency, domain-specific, cross-lingual, multilingual, and long-document summarization, as well as handling noisy data. Our objective is to provide researchers and practitioners with a structured overview of the domain, enabling them to better understand the current landscape and identify potential areas for further research and improvement.

Deriving health indicators of rotating machines is crucial for their maintenance. However, this process is challenging for the prevalent adopted intelligent methods since they may take the whole data distributions, not only introducing noise interference but also lacking the explainability. To address these issues, we propose a diffusion-based weakly-supervised approach for deriving health indicators of rotating machines, enabling early fault detection and continuous monitoring of condition evolution. This approach relies on a classifier-free diffusion model trained using healthy samples and a few anomalies. This model generates healthy samples. and by comparing the differences between the original samples and the generated ones in the envelope spectrum, we construct an anomaly map that clearly identifies faults. Health indicators are then derived, which can explain the fault types and mitigate noise interference. Comparative studies on two cases demonstrate that the proposed method offers superior health monitoring effectiveness and robustness compared to baseline models.

Entity linking (EL) in conversations faces notable challenges in practical applications, primarily due to the scarcity of entity-annotated conversational datasets and sparse knowledge bases (KB) containing domain-specific, long-tail entities. We designed targeted evaluation scenarios to measure the efficacy of EL models under resource constraints. Our evaluation employs two KBs: Fandom, exemplifying real-world EL complexities, and the widely used Wikipedia. First, we assess EL models' ability to generalize to a new unfamiliar KB using Fandom and a novel zero-shot conversational entity linking dataset that we curated based on Reddit discussions on Fandom entities. We then evaluate the adaptability of EL models to conversational settings without prior training. Our results indicate that current zero-shot EL models falter when introduced to new, domain-specific KBs without prior training, significantly dropping in performance. Our findings reveal that previous evaluation approaches fall short of capturing real-world complexities for zero-shot EL, highlighting the necessity for new approaches to design and assess conversational EL models to adapt to limited resources. The evaluation setup and the dataset proposed in this research are made publicly available.

Machine learning's widespread adoption in decision-making processes raises concerns about fairness, particularly regarding the treatment of sensitive features and potential discrimination against minorities. The software engineering community has responded by developing fairness-oriented metrics, empirical studies, and approaches. However, there remains a gap in understanding and categorizing practices for engineering fairness throughout the machine learning lifecycle. This paper presents a novel catalog of practices for addressing fairness in machine learning derived from a systematic mapping study. The study identifies and categorizes 28 practices from existing literature, mapping them onto different stages of the machine learning lifecycle. From this catalog, the authors extract actionable items and implications for both researchers and practitioners in software engineering. This work aims to provide a comprehensive resource for integrating fairness considerations into the development and deployment of machine learning systems, enhancing their reliability, accountability, and credibility.

As the field of artificial intelligence progresses, assistive technologies are becoming more widely used across all industries. The healthcare industry is no different, with numerous studies being done to develop assistive tools for healthcare professionals. Automatic diagnostic systems are one such beneficial tool that can assist with a variety of tasks, including collecting patient information, analyzing test results, and diagnosing patients. However, the idea of developing systems that can provide a differential diagnosis has been largely overlooked in most of these research studies. In this study, we propose a transformer-based approach for providing differential diagnoses based on a patient's age, sex, medical history, and symptoms. We use the DDXPlus dataset, which provides differential diagnosis information for patients based on 49 disease types. Firstly, we propose a method to process the tabular patient data from the dataset and engineer them into patient reports to make them suitable for our research. In addition, we introduce two data modification modules to diversify the training data and consequently improve the robustness of the models. We approach the task as a multi-label classification problem and conduct extensive experiments using four transformer models. All the models displayed promising results by achieving over 97% F1 score on the held-out test set. Moreover, we design additional behavioral tests to get a broader understanding of the models. In particular, for one of our test cases, we prepared a custom test set of 100 samples with the assistance of a doctor. The results on the custom set showed that our proposed data modification modules improved the model's generalization capabilities. We hope our findings will provide future researchers with valuable insights and inspire them to develop reliable systems for automatic differential diagnosis.