Statistical Learning
Gradient-based Discrete Sampling with Automatic Cyclical Scheduling
Pynadath, Patrick, Bhattacharya, Riddhiman, Hariharan, Arun, Zhang, Ruqi
Discrete distributions, particularly in high-dimensional deep models, are often highly multimodal due to inherent discontinuities. While gradient-based discrete sampling has proven effective, it is susceptible to becoming trapped in local modes due to the gradient information. To tackle this challenge, we propose an automatic cyclical scheduling, designed for efficient and accurate sampling in multimodal discrete distributions. Our method contains three key components: (1) a cyclical step size schedule where large steps discover new modes and small steps exploit each mode; (2) a cyclical balancing schedule, ensuring ``balanced" proposals for given step sizes and high efficiency of the Markov chain; and (3) an automatic tuning scheme for adjusting the hyperparameters in the cyclical schedules, allowing adaptability across diverse datasets with minimal tuning. We prove the non-asymptotic convergence and inference guarantee for our method in general discrete distributions. Extensive experiments demonstrate the superiority of our method in sampling complex multimodal discrete distributions.
Feedback Efficient Online Fine-Tuning of Diffusion Models
Uehara, Masatoshi, Zhao, Yulai, Black, Kevin, Hajiramezanali, Ehsan, Scalia, Gabriele, Diamant, Nathaniel Lee, Tseng, Alex M, Levine, Sergey, Biancalani, Tommaso
Diffusion models excel at modeling complex data distributions, including those of images, proteins, and small molecules. However, in many cases, our goal is to model parts of the distribution that maximize certain properties: for example, we may want to generate images with high aesthetic quality, or molecules with high bioactivity. It is natural to frame this as a reinforcement learning (RL) problem, in which the objective is to fine-tune a diffusion model to maximize a reward function that corresponds to some property. Even with access to online queries of the ground-truth reward function, efficiently discovering high-reward samples can be challenging: they might have a low probability in the initial distribution, and there might be many infeasible samples that do not even have a well-defined reward (e.g., unnatural images or physically impossible molecules). In this work, we propose a novel reinforcement learning procedure that efficiently explores on the manifold of feasible samples. We present a theoretical analysis providing a regret guarantee, as well as empirical validation across three domains: images, biological sequences, and molecules.
Simple, unified analysis of Johnson-Lindenstrauss with applications
We present a simple and unified analysis of the Johnson-Lindenstrauss (JL) lemma, a cornerstone in the field of dimensionality reduction critical for managing high-dimensional data. Our approach not only simplifies the understanding but also unifies various constructions under the JL framework, including spherical, binary-coin, sparse JL, Gaussian and sub-Gaussian models. This simplification and unification make significant strides in preserving the intrinsic geometry of data, essential across diverse applications from streaming algorithms to reinforcement learning. Notably, we deliver the first rigorous proof of the spherical construction's effectiveness and provide a general class of sub-Gaussian constructions within this simplified framework. At the heart of our contribution is an innovative extension of the Hanson-Wright inequality to high dimensions, complete with explicit constants. By employing simple yet powerful probabilistic tools and analytical techniques, such as an enhanced diagonalization process, our analysis not only solidifies the JL lemma's theoretical foundation by removing an independence assumption but also extends its practical reach, showcasing its adaptability and importance in contemporary computational algorithms.
Doubly Calibrated Estimator for Recommendation on Data Missing Not At Random
Recommender systems often suffer from selection bias as users tend to rate their preferred items. The datasets collected under such conditions exhibit entries missing not at random and thus are not randomized-controlled trials representing the target population. To address this challenge, a doubly robust estimator and its enhanced variants have been proposed as they ensure unbiasedness when accurate imputed errors or predicted propensities are provided. However, we argue that existing estimators rely on miscalibrated imputed errors and propensity scores as they depend on rudimentary models for estimation. We provide theoretical insights into how miscalibrated imputation and propensity models may limit the effectiveness of doubly robust estimators and validate our theorems using real-world datasets. On this basis, we propose a Doubly Calibrated Estimator that involves the calibration of both the imputation and propensity models. To achieve this, we introduce calibration experts that consider different logit distributions across users. Moreover, we devise a tri-level joint learning framework, allowing the simultaneous optimization of calibration experts alongside prediction and imputation models. Through extensive experiments on real-world datasets, we demonstrate the superiority of the Doubly Calibrated Estimator in the context of debiased recommendation tasks.
EEG classifier cross-task transfer to avoid training sessions in robot-assisted rehabilitation
Kueper, Niklas, Kim, Su Kyoung, Kirchner, Elsa Andrea
Background: For an individualized support of patients during rehabilitation, learning of individual machine learning models from the human electroencephalogram (EEG) is required. Our approach allows labeled training data to be recorded without the need for a specific training session. For this, the planned exoskeleton-assisted rehabilitation enables bilateral mirror therapy, in which movement intentions can be inferred from the activity of the unaffected arm. During this therapy, labeled EEG data can be collected to enable movement predictions of only the affected arm of a patient. Methods: A study was conducted with 8 healthy subjects and the performance of the classifier transfer approach was evaluated. Each subject performed 3 runs of 40 self-intended unilateral and bilateral reaching movements toward a target while EEG data was recorded from 64 channels. A support vector machine (SVM) classifier was trained under both movement conditions to make predictions for the same type of movement. Furthermore, the classifier was evaluated to predict unilateral movements by only beeing trained on the data of the bilateral movement condition. Results: The results show that the performance of the classifier trained on selected EEG channels evoked by bilateral movement intentions is not significantly reduced compared to a classifier trained directly on EEG data including unilateral movement intentions. Moreover, the results show that our approach also works with only 8 or even 4 channels. Conclusion: It was shown that the proposed classifier transfer approach enables motion prediction without explicit collection of training data. Since the approach can be applied even with a small number of EEG channels, this speaks for the feasibility of the approach in real therapy sessions with patients and motivates further investigations with stroke patients.
SKILL: Similarity-aware Knowledge distILLation for Speech Self-Supervised Learning
Zampierin, Luca, Hacene, Ghouthi Boukli, Nguyen, Bac, Ravanelli, Mirco
Self-supervised learning (SSL) has achieved remarkable success across various speech-processing tasks. To enhance its efficiency, previous works often leverage the use of compression techniques. A notable recent attempt is DPHuBERT, which applies joint knowledge distillation (KD) and structured pruning to learn a significantly smaller SSL model. In this paper, we contribute to this research domain by introducing SKILL, a novel method that conducts distillation across groups of layers instead of distilling individual arbitrarily selected layers within the teacher network. The identification of the layers to distill is achieved through a hierarchical clustering procedure applied to layer similarity measures. Extensive experiments demonstrate that our distilled version of WavLM Base+ not only outperforms DPHuBERT but also achieves state-of-the-art results in the 30M parameters model class across several SUPERB tasks.
DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design
Guan, Jiaqi, Zhou, Xiangxin, Yang, Yuwei, Bao, Yu, Peng, Jian, Ma, Jianzhu, Liu, Qiang, Wang, Liang, Gu, Quanquan
Designing 3D ligands within a target binding site is a fundamental task in drug discovery. Existing structured-based drug design methods treat all ligand atoms equally, which ignores different roles of atoms in the ligand for drug design and can be less efficient for exploring the large drug-like molecule space. In this paper, inspired by the convention in pharmaceutical practice, we decompose the ligand molecule into two parts, namely arms and scaffold, and propose a new diffusion model, DecompDiff, with decomposed priors over arms and scaffold. In order to facilitate the decomposed generation and improve the properties of the generated molecules, we incorporate both bond diffusion in the model and additional validity guidance in the sampling phase. Extensive experiments on CrossDocked2020 show that our approach achieves state-of-the-art performance in generating high-affinity molecules while maintaining proper molecular properties and conformational stability, with up to -8.39 Avg. Vina Dock score and 24.5 Success Rate. The code is provided at https://github.com/bytedance/DecompDiff
Vygotsky Distance: Measure for Benchmark Task Similarity
Surkov, Maxim K., Yamshchikov, Ivan P.
Evaluation plays a significant role in modern natural language processing. Most modern NLP benchmarks consist of arbitrary sets of tasks that neither guarantee any generalization potential for the model once applied outside the test set nor try to minimize the resource consumption needed for model evaluation. This paper presents a theoretical instrument and a practical algorithm to calculate similarity between benchmark tasks, we call this similarity measure "Vygotsky distance". The core idea of this similarity measure is that it is based on relative performance of the "students" on a given task, rather that on the properties of the task itself. If two tasks are close to each other in terms of Vygotsky distance the models tend to have similar relative performance on them. Thus knowing Vygotsky distance between tasks one can significantly reduce the number of evaluation tasks while maintaining a high validation quality. Experiments on various benchmarks, including GLUE, SuperGLUE, CLUE, and RussianSuperGLUE, demonstrate that a vast majority of NLP benchmarks could be at least 40% smaller in terms of the tasks included. Most importantly, Vygotsky distance could also be used for the validation of new tasks thus increasing the generalization potential of the future NLP models.
CorpusBrain++: A Continual Generative Pre-Training Framework for Knowledge-Intensive Language Tasks
Guo, Jiafeng, Zhou, Changjiang, Zhang, Ruqing, Chen, Jiangui, de Rijke, Maarten, Fan, Yixing, Cheng, Xueqi
Knowledge-intensive language tasks (KILTs) typically require retrieving relevant documents from trustworthy corpora, e.g., Wikipedia, to produce specific answers. Very recently, a pre-trained generative retrieval model for KILTs, named CorpusBrain, was proposed and reached new state-of-the-art retrieval performance. However, most existing research on KILTs, including CorpusBrain, has predominantly focused on a static document collection, overlooking the dynamic nature of real-world scenarios, where new documents are continuously being incorporated into the source corpus. To address this gap, it is crucial to explore the capability of retrieval models to effectively handle the dynamic retrieval scenario inherent in KILTs. In this work, we first introduce the continual document learning (CDL) task for KILTs and build a novel benchmark dataset named KILT++ based on the original KILT dataset for evaluation. Then, we conduct a comprehensive study over the use of pre-trained CorpusBrain on KILT++. Unlike the promising results in the stationary scenario, CorpusBrain is prone to catastrophic forgetting in the dynamic scenario, hence hampering the retrieval performance. To alleviate this issue, we propose CorpusBrain++, a continual generative pre-training framework. Empirical results demonstrate the significant effectiveness and remarkable efficiency of CorpusBrain++ in comparison to both traditional and generative IR methods.
Federated Causal Discovery from Heterogeneous Data
Li, Loka, Ng, Ignavier, Luo, Gongxu, Huang, Biwei, Chen, Guangyi, Liu, Tongliang, Gu, Bin, Zhang, Kun
Conventional causal discovery methods rely on centralized data, which is inconsistent with the decentralized nature of data in many real-world situations. This discrepancy has motivated the development of federated causal discovery (FCD) approaches. However, existing FCD methods may be limited by their potentially restrictive assumptions of identifiable functional causal models or homogeneous data distributions, narrowing their applicability in diverse scenarios. In this paper, we propose a novel FCD method attempting to accommodate arbitrary causal models and heterogeneous data. We first utilize a surrogate variable corresponding to the client index to account for the data heterogeneity across different clients. We then develop a federated conditional independence test (FCIT) for causal skeleton discovery and establish a federated independent change principle (FICP) to determine causal directions. These approaches involve constructing summary statistics as a proxy of the raw data to protect data privacy. Owing to the nonparametric properties, FCIT and FICP make no assumption about particular functional forms, thereby facilitating the handling of arbitrary causal models. We conduct extensive experiments on synthetic and real datasets to show the efficacy of our method. The code is available at https://github.com/lokali/FedCDH.git.