With rapid urbanization in the modern era, traffic signals from various sensors have been playing a significant role in monitoring the states of cities, which provides a strong foundation in ensuring safe travel, reducing traffic congestion and optimizing urban mobility. Most existing methods for traffic signal modeling often rely on the original data modality, i.e., numerical direct readings from the sensors in cities. However, this unimodal approach overlooks the semantic information existing in multimodal heterogeneous urban data in different perspectives, which hinders a comprehensive understanding of traffic signals and limits the accurate prediction of complex traffic dynamics. To address this problem, we propose a novel Multimodal framework, MTP, for urban Traffic Profiling, which learns multimodal features through numeric, visual, and textual perspectives. The three branches drive for a multimodal perspective of urban traffic signal learning in the frequency domain, while the frequency learning strategies delicately refine the information for extraction. Specifically, we first conduct the visual augmentation for the traffic signals, which transforms the original modality into frequency images and periodicity images for visual learning. Also, we augment descriptive texts for the traffic signals based on the specific topic, background information and item description for textual learning. To complement the numeric information, we utilize frequency multilayer perceptrons for learning on the original modality. We design a hierarchical contrastive learning on the three branches to fuse the spectrum of three modalities. Finally, extensive experiments on six real-world datasets demonstrate superior performance compared with the state-of-the-art approaches.

Unsupervised learning on high-dimensional RNA-seq data can reveal molecular subtypes beyond standard labels. We combine an autoencoder-based representation with clustering and stability analysis to search for rare but reproducible genomic subtypes. On the UCI "Gene Expression Cancer RNA-Seq" dataset (801 samples, 20,531 genes; BRCA, COAD, KIRC, LUAD, PRAD), a pan-cancer analysis shows clusters aligning almost perfectly with tissue of origin (Cramer's V = 0.887), serving as a negative control. We therefore reframe the problem within KIRC (n = 146): we select the top 2,000 highly variable genes, standardize them, train a feed-forward autoencoder (128-dimensional latent space), and run k-means for k = 2-10. While global indices favor small k, scanning k with a pre-specified discovery rule (rare < 10 percent and stable with Jaccard >= 0.60 across 20 seeds after Hungarian alignment) yields a simple solution at k = 5 (silhouette = 0.129, DBI = 2.045) with a rare cluster C0 (6.85 percent of patients) that is highly stable (Jaccard = 0.787). Cluster-vs-rest differential expression (Welch's t-test, Benjamini-Hochberg FDR) identifies coherent markers. Overall, pan-cancer clustering is dominated by tissue of origin, whereas a stability-aware within-cancer approach reveals a rare, reproducible KIRC subtype.

Understanding the principles that govern dynamical systems is a central challenge across many scientific domains, including biology and ecology. Incomplete knowledge of nonlinear interactions and stochastic effects often renders bottom-up modeling approaches ineffective, motivating the development of methods that can discover governing equations directly from data. In such contexts, parametric models often struggle without strong prior knowledge, especially when estimating intrinsic noise. Nonetheless, incorporating stochastic effects is often essential for understanding the dynamic behavior of complex systems such as gene regulatory networks and signaling pathways. To address these challenges, we introduce Trine (Three-phase Regression for INtrinsic noisE), a nonparametric, kernel-based framework that infers state-dependent intrinsic noise from time-series data. Trine features a three-stage algorithm that com- bines analytically solvable subproblems with a structured kernel architecture that captures both abrupt noise-driven fluctuations and smooth, state-dependent changes in variance. We validate Trine on biological and ecological systems, demonstrating its ability to uncover hidden dynamics without relying on predefined parametric assumptions. Across several benchmark problems, Trine achieves performance comparable to that of an oracle. Biologically, this oracle can be viewed as an idealized observer capable of directly tracking the random fluctuations in molecular concentrations or reaction events within a cell. The Trine framework thus opens new avenues for understanding how intrinsic noise affects the behavior of complex systems.

In this study, we tackle the challenging task of predicting secondary structures from protein primary sequences, a pivotal initial stride towards predicting tertiary structures, while yielding crucial insights into protein activity, relationships, and functions. Existing methods often utilize extensive sets of unlabeled amino acid sequences. However, these approaches neither explicitly capture nor harness the accessible protein 3D structural data, which is recognized as a decisive factor in dictating protein functions. To address this, we utilize protein residue graphs and introduce various forms of sequential or structural connections to capture enhanced spatial information. We adeptly combine Graph Neural Networks (GNNs) and Language Models (LMs), specifically utilizing a pre-trained transformer-based protein language model to encode amino acid sequences and employing message-passing mechanisms like GCN and R-GCN to capture geometric characteristics of protein structures. Employing convolution within a specific node's nearby region, including relations, we stack multiple con-volutional layers to efficiently learn combined insights from the protein's spatial graph, revealing intricate interconnections and dependencies in its structural To assess our model's performance, we employed the training dataset provided by NetSurfP-2.0, which outlines secondary structure in 3-and 8-states. Extensive experiments show that our proposed model, SSRGNet surpasses the baseline on f1-scores. Introduction Proteins serve as essential components within cells and are involved in various applications, spanning from therapeutics to materials. They are composed of a sequence of amino acids that fold into distinct shapes. With the development of affordable sequencing technologies [1, 2], a substantial number of novel protein sequences have been identified in recent times. However, annotating the functional properties of a newly discovered protein sequence is still a laborious and expensive process. Thus, there is a need for reliable and efficient computational methods to accurately predict and assign functions to proteins, thereby bridging the gap between sequence information and functional knowledge. The analysis of protein structure, particularly the tertiary structure, is highly significant for practical applications related to proteins, such as understanding their functions and designing drugs [3].

Deceptive reviews mislead consumers, harm businesses, and undermine trust in online marketplaces. Machine learning classifiers can learn from large amounts of training examples to effectively distinguish deceptive reviews from genuine ones. However, the distinguishing features learned by these classifiers are often subtle, fragmented, and difficult for humans to interpret. In this work, we explore using large language models (LLMs) to translate machine-learned lexical cues into human-understandable language phenomena that can differentiate deceptive reviews from genuine ones. We show that language phenomena obtained in this manner are empirically grounded in data, generalizable across similar domains, and more predictive than phenomena either in LLMs' prior knowledge or obtained through in-context learning. These language phenomena have the potential to aid people in critically assessing the credibility of online reviews in environments where deception detection classifiers are unavailable.

Intelligent wearable systems are at the forefront of precision medicine and play a crucial role in enhancing human-machine interaction. Traditional devices often encounter limitations due to their dependence on empirical material design and basic signal processing techniques. To overcome these issues, we introduce the concept of Human-Symbiotic Health Intelligence (HSHI), which is a framework that integrates multi-modal sensor networks with edge-cloud collaborative computing and a hybrid approach to data and knowledge modeling. HSHI is designed to adapt dynamically to both inter-individual and intra-individual variability, transitioning health management from passive monitoring to an active collaborative evolution. The framework incorporates AI-driven optimization of materials and micro-structures, provides robust interpretation of multi-modal signals, and utilizes a dual mechanism that merges population-level insights with personalized adaptations. Moreover, the integration of closed-loop optimization through reinforcement learning and digital twins facilitates customized interventions and feedback. In general, HSHI represents a significant shift in healthcare, moving towards a model that emphasizes prevention, adaptability, and a harmonious relationship between technology and health management.

Multi-view clustering (MVC), which aims to separate the multi-view data into distinct clusters in an unsupervised manner, is a fundamental yet challenging task. To enhance its applicability in real-world scenarios, this paper addresses a more challenging task: MVC under multi-source noises, including missing noise and observation noise. To this end, we propose a novel framework, Reliability-Aware Contrastive Deep Multi-View Clustering (RAC-DMVC), which constructs a reliability graph to guide robust representation learning under noisy environments. Specifically, to address observation noise, we introduce a cross-view reconstruction to enhances robustness at the data level, and a reliability-aware noise contrastive learning to mitigates bias in positive and negative pairs selection caused by noisy representations. To handle missing noise, we design a dual-attention imputation to capture shared information across views while preserving view-specific features. In addition, a self-supervised cluster distillation module further refines the learned representations and improves the clustering performance. Extensive experiments on five benchmark datasets demonstrate that RAC-DMVC outperforms SOTA methods on multiple evaluation metrics and maintains excellent performance under varying ratios of noise.

Accurate uncertainty quantification is a critical challenge in machine learning. While neural networks are highly versatile and capable of learning complex patterns, they often lack interpretability due to their ``black box'' nature. On the other hand, probabilistic ``white box'' models, though interpretable, often suffer from a significant performance gap when compared to neural networks. To address this, we propose a novel quantum physics-based ``white box'' method that offers both accurate uncertainty quantification and enhanced interpretability. By mapping the kernel mean embedding (KME) of a time series data vector to a reproducing kernel Hilbert space (RKHS), we construct a tensor network-inspired 1D spin chain Hamiltonian, with the KME as one of its eigen-functions or eigen-modes. We then solve the associated Schr{ö}dinger equation and apply perturbation theory to quantify uncertainty, thereby improving the interpretability of tasks performed with the quantum tensor network-based model. We demonstrate the effectiveness of this methodology, compared to state-of-the-art ``white box" models, in change point detection and time series clustering, providing insights into the uncertainties associated with decision-making throughout the process.

Quantum machine learning (QML) has attracted growing interest with the rapid parallel advances in large-scale classical machine learning and quantum technologies. Similar to classical machine learning, QML models also face challenges arising from the scarcity of labeled data, particularly as their scale and complexity increase. Here, we introduce self-supervised pretraining of quantum representations that reduces reliance on labeled data by learning invariances from unlabeled examples. We implement this paradigm on a programmable trapped-ion quantum computer, encoding images as quantum states. In situ contrastive pretraining on hardware yields a representation that, when fine-tuned, classifies image families with higher mean test accuracy and lower run-to-run variability than models trained from random initialization. Performance improvement is especially significant in regimes with limited labeled training data. We show that the learned invariances generalize beyond the pretraining image samples. Unlike prior work, our pipeline derives similarity from measured quantum overlaps and executes all training and classification stages on hardware. These results establish a label-efficient route to quantum representation learning, with direct relevance to quantum-native datasets and a clear path to larger classical inputs.

Understanding sentiment in financial documents is crucial for gaining insights into market behavior. These reports often contain obfuscated language designed to present a positive or neutral outlook, even when underlying conditions may be less favorable. This paper presents a novel approach using Aspect-Based Sentiment Analysis (ABSA) to decode obfuscated sentiment in Thai financial annual reports. We develop specific guidelines for annotating obfuscated sentiment in these texts and annotate more than one hundred financial reports. We then benchmark various text classification models on this annotated dataset, demonstrating strong performance in sentiment classification. Additionally, we conduct an event study to evaluate the real-world implications of our sentiment analysis on stock prices. Our results suggest that market reactions are selectively influenced by specific aspects within the reports. Our findings underscore the complexity of sentiment analysis in financial texts and highlight the importance of addressing obfuscated language to accurately assess market sentiment.