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 Clustering


ADNF-Clustering: An Adaptive and Dynamic Neuro-Fuzzy Clustering for Leukemia Prediction

arXiv.org Artificial Intelligence

Leukemia diagnosis and monitoring rely increasingly on high-throughput image data, yet conventional clustering methods lack the flexibility to accommodate evolving cellular patterns and quantify uncertainty in real time. We introduce Adaptive and Dynamic Neuro-Fuzzy Clustering, a novel streaming-capable framework that combines Convolutional Neural Network-based feature extraction with an online fuzzy clustering engine. ADNF initializes soft partitions via Fuzzy C-Means, then continuously updates micro-cluster centers, densities, and fuzziness parameters using a Fuzzy Temporal Index (FTI) that measures entropy evolution. A topology refinement stage performs density-weighted merging and entropy-guided splitting to guard against over- and under-segmentation. On the C-NMC leukemia microscopy dataset, our tool achieves a silhouette score of 0.51, demonstrating superior cohesion and separation over static baselines. The method's adaptive uncertainty modeling and label-free operation hold immediate potential for integration within the INFANT pediatric oncology network, enabling scalable, up-to-date support for personalized leukemia management.


Emergent Lexical Semantics in Neural Language Models: Testing Martin's Law on LLM-Generated Text

arXiv.org Artificial Intelligence

We present the first systematic investigation of Martin's Law - the empirical relationship between word frequency and polysemy - in text generated by neural language models during training. Using DBSCAN clustering of contextualized embeddings as an operationalization of word senses, we analyze four Pythia models (70M-1B parameters) across 30 training checkpoints. Our results reveal a non-monotonic developmental trajectory: Martin's Law emerges around checkpoint 100, reaches peak correlation (r > 0.6) at checkpoint 104, then degrades by checkpoint 105. Smaller models (70M, 160M) experience catastrophic semantic collapse at late checkpoints, while larger models (410M, 1B) show graceful degradation. The frequency-specificity trade-off remains stable (r $\approx$ -0.3) across all models. These findings suggest that compliance with linguistic regularities in LLM-generated text is not monotonically increasing with training, but instead follows a balanced trajectory with an optimal semantic window. This work establishes a novel methodology for evaluating emergent linguistic structure in neural language models.


Interpretable Fair Clustering

arXiv.org Artificial Intelligence

Fair clustering has gained increasing attention in recent years, especially in applications involving socially sensitive attributes. However, existing fair clustering methods often lack inter-pretability, limiting their applicability in high-stakes scenarios where understanding the rationale behind clustering decisions is essential. In this work, we address this limitation by proposing an interpretable and fair clustering framework, which integrates fairness constraints into the structure of decision trees. Our approach constructs interpretable decision trees that partition the data while ensuring fair treatment across protected groups. To further enhance the practicality of our framework, we also introduce a variant that requires no fairness hyperparameter tuning, achieved through post-pruning a tree constructed without fairness constraints. Extensive experiments on both real-world and synthetic datasets demonstrate that our method not only delivers competitive clustering performance and improved fairness, but also offers additional advantages such as interpretability and the ability to handle multiple sensitive attributes. These strengths enable our method to perform robustly under complex fairness constraints, opening new possibilities for equitable and transparent clustering.


Clustering Approaches for Mixed-Type Data: A Comparative Study

arXiv.org Machine Learning

Clustering is widely used in unsupervised learning to find homogeneous groups of observations within a dataset. However, clustering mixed-type data remains a challenge, as few existing approaches are suited for this task. This study presents the state-of-the-art of these approaches and compares them using various simulation models. The compared methods include the distance-based approaches k-prototypes, PDQ, and convex k-means, and the probabilistic methods KAy-means for MIxed LArge data (KAMILA), the mixture of Bayesian networks (MBNs), and latent class model (LCM). The aim is to provide insights into the behavior of different methods across a wide range of scenarios by varying some experimental factors such as the number of clusters, cluster overlap, sample size, dimension, proportion of continuous variables in the dataset, and clusters' distribution. The degree of cluster overlap and the proportion of continuous variables in the dataset and the sample size have a significant impact on the observed performances. When strong interactions exist between variables alongside an explicit dependence on cluster membership, none of the evaluated methods demonstrated satisfactory performance. In our experiments KAMILA, LCM, and k-prototypes exhibited the best performance, with respect to the adjusted rand index (ARI). All the methods are available in R.


Ranking-Enhanced Anomaly Detection Using Active Learning-Assisted Attention Adversarial Dual AutoEncoders

arXiv.org Artificial Intelligence

Advanced Persistent Threats (APTs) pose a significant challenge in cybersecurity due to their stealthy and long-term nature. Modern supervised learning methods require extensive labeled data, which is often scarce in real-world cybersecurity environments. In this paper, we propose an innovative approach that leverages AutoEncoders for unsupervised anomaly detection, augmented by active learning to iteratively improve the detection of APT anomalies. By selectively querying an oracle for labels on uncertain or ambiguous samples, we minimize labeling costs while improving detection rates, enabling the model to improve its detection accuracy with minimal data while reducing the need for extensive manual labeling. We provide a detailed formulation of the proposed Attention Adversarial Dual AutoEncoder-based anomaly detection framework and show how the active learning loop iteratively enhances the model. The framework is evaluated on real-world imbalanced provenance trace databases produced by the DARPA Transparent Computing program, where APT-like attacks constitute as little as 0.004\% of the data. The datasets span multiple operating systems, including Android, Linux, BSD, and Windows, and cover two attack scenarios. The results have shown significant improvements in detection rates during active learning and better performance compared to other existing approaches.


From data to concepts via wiring diagrams

arXiv.org Artificial Intelligence

A wiring diagram is a labeled directed graph that represents an abstract concept such as a temporal process. In this article, we introduce the notion of a quasi-skeleton wiring diagram graph, and prove that quasi-skeleton wiring diagram graphs correspond to Hasse diagrams. Using this result, we designed algorithms that extract wiring diagrams from sequential data. We used our algorithms in analyzing the behavior of an autonomous agent playing a computer game, and the algorithms correctly identified the winning strategies. We compared the performance of our main algorithm with two other algorithms based on standard clustering techniques (DBSCAN and agglomerative hierarchical), including when some of the data was perturbed. Overall, this article brings together techniques in category theory, graph theory, clustering, reinforcement learning, and data engineering.


Cross-Contrastive Clustering for Multimodal Attributed Graphs with Dual Graph Filtering

arXiv.org Artificial Intelligence

Multimodal Attributed Graphs (MMAGs) are an expressive data model for representing the complex interconnections among entities that associate attributes from multiple data modalities (text, images, etc.). Clustering over such data finds numerous practical applications in real scenarios, including social community detection, medical data analytics, etc. However, as revealed by our empirical studies, existing multi-view clustering solutions largely rely on the high correlation between attributes across various views and overlook the unique characteristics (e.g., low modality-wise correlation and intense feature-wise noise) of multimodal attributes output by large pre-trained language and vision models in MMAGs, leading to suboptimal clustering performance. Inspired by foregoing empirical observations and our theoretical analyses with graph signal processing, we propose the Dual Graph Filtering (DGF) scheme, which innovatively incorporates a feature-wise denoising component into node representation learning, thereby effectively overcoming the limitations of traditional graph filters adopted in the extant multi-view graph clustering approaches. On top of that, DGF includes a tri-cross contrastive training strategy that employs instance-level contrastive learning across modalities, neighborhoods, and communities for learning robust and discriminative node representations. Our comprehensive experiments on eight benchmark MMAG datasets exhibit that DGF is able to outperform a wide range of state-of-the-art baselines consistently and significantly in terms of clustering quality measured against ground-truth labels.


Rethinking Semi-Supervised Node Classification with Self-Supervised Graph Clustering

arXiv.org Artificial Intelligence

The emergence of graph neural networks (GNNs) has offered a powerful tool for semi-supervised node classification tasks. Subsequent studies have achieved further improvements through refining the message passing schemes in GNN models or exploiting various data augmentation techniques to mitigate limited supervision. In real graphs, nodes often tend to form tightly-knit communities/clusters, which embody abundant signals for compensating label scarcity in semi-supervised node classification but are not explored in prior methods. Inspired by this, this paper presents NCGC that integrates self-supervised graph clustering and semi-supervised classification into a unified framework. Firstly, we theoretically unify the optimization objectives of GNNs and spectral graph clustering, and based on that, develop soft orthogonal GNNs (SOGNs) that leverage a refined message passing paradigm to generate node representations for both classification and clustering. On top of that, NCGC includes a self-supervised graph clustering module that enables the training of SOGNs for learning representations of unlabeled nodes in a self-supervised manner. Particularly, this component comprises two non-trivial clustering objectives and a Sinkhorn-Knopp normalization that transforms predicted cluster assignments into balanced soft pseudo-labels. Through combining the foregoing clustering module with the classification model using a multi-task objective containing the supervised classification loss on labeled data and self-supervised clustering loss on unlabeled data, NCGC promotes synergy between them and achieves enhanced model capacity. Our extensive experiments showcase that the proposed NCGC framework consistently and considerably outperforms popular GNN models and recent baselines for semi-supervised node classification on seven real graphs, when working with various classic GNN backbones.


An Adaptive, Data-Integrated Agent-Based Modeling Framework for Explainable and Contestable Policy Design

arXiv.org Artificial Intelligence

Multi-agent systems often operate under feedback, adaptation, and non-stationarity, yet many simulation studies retain static decision rules and fixed control parameters. This paper introduces a general adaptive multi-agent learning framework that integrates: (i) four dynamic regimes distinguishing static versus adaptive agents and fixed versus adaptive system parameters; (ii) information-theoretic diagnostics (entropy rate, statistical complexity, and predictive information) to assess predictability and structure; (iii) structural causal models for explicit intervention semantics; (iv) procedures for generating agent-level priors from aggregate or sample data; and (v) unsupervised methods for identifying emergent behavioral regimes. The framework offers a domain-neutral architecture for analyzing how learning agents and adaptive controls jointly shape system trajectories, enabling systematic comparison of stability, performance, and interpretability across non-equilibrium, oscillatory, or drifting dynamics. Mathematical definitions, computational operators, and an experimental design template are provided, yielding a structured methodology for developing explainable and contestable multi-agent decision processes.


Large Scale Community-Aware Network Generation

arXiv.org Artificial Intelligence

Community detection, or network clustering, is used to identify latent community structure in networks. Due to the scarcity of labeled ground truth in real-world networks, evaluating these algorithms poses significant challenges. To address this, researchers use synthetic network generators that produce networks with ground-truth community labels. RECCS is one such algorithm that takes a network and its clustering as input and generates a synthetic network through a modular pipeline. Each generated ground truth cluster preserves key characteristics of the corresponding input cluster, including connectivity, minimum degree, and degree sequence distribution. The output consists of a synthetically generated network, and disjoint ground truth cluster labels for all nodes. In this paper, we present two enhanced versions: RECCS+ and RECCS++. RECCS+ maintains algorithmic fidelity to the original RECCS while introducing parallelization through an orchestrator that coordinates algorithmic components across multiple processes and employs multithreading. RECCS++ builds upon this foundation with additional algorithmic optimizations to achieve further speedup. Our experimental results demonstrate that RECCS+ and RECCS++ achieve speedups of up to 49x and 139x respectively on our benchmark datasets, with RECCS++'s additional performance gains involving a modest accuracy tradeoff. With this newfound performance, RECCS++ can now scale to networks with over 100 million nodes and nearly 2 billion edges.