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 Clustering


Clustering Validation with The Area Under Precision-Recall Curves

arXiv.org Artificial Intelligence

Confusion matrices and derived metrics provide a comprehensive framework for the evaluation of model performance in machine learning. These are well-known and extensively employed in the supervised learning domain, particularly classification. Surprisingly, such a framework has not been fully explored in the context of clustering validation. Indeed, just recently such a gap has been bridged with the introduction of the Area Under the ROC Curve for Clustering (AUCC), an internal/relative Clustering Validation Index (CVI) that allows for clustering validation in real application scenarios. In this work we explore the Area Under Precision-Recall Curve (and related metrics) in the context of clustering validation. We show that these are not only appropriate as CVIs, but should also be preferred in the presence of cluster imbalance. We perform a comprehensive evaluation of proposed and state-of-art CVIs on real and simulated data sets. Our observations corroborate towards an unified validation framework for supervised and unsupervised learning, given that they are consistent with existing guidelines established for the evaluation of supervised learning models.


Clustering Social Touch Gestures for Human-Robot Interaction

arXiv.org Artificial Intelligence

Social touch provides a rich non-verbal communication channel between humans and robots. Prior work has identified a set of touch gestures for human-robot interaction and described them with natural language labels (e.g., stroking, patting). Yet, no data exists on the semantic relationships between the touch gestures in users' minds. To endow robots with touch intelligence, we investigated how people perceive the similarities of social touch labels from the literature. In an online study, 45 participants grouped 36 social touch labels based on their perceived similarities and annotated their groupings with descriptive names. We derived quantitative similarities of the gestures from these groupings and analyzed the similarities using hierarchical clustering. The analysis resulted in 9 clusters of touch gestures formed around the social, emotional, and contact characteristics of the gestures. We discuss the implications of our results for designing and evaluating touch sensing and interactions with social robots.


Enhancing Cluster Quality of Numerical Datasets with Domain Ontology

arXiv.org Artificial Intelligence

Ontology-based clustering has gained attention in recent years due to the potential benefits of ontology. Current ontology-based clustering approaches have mainly been applied to reduce the dimensionality of attributes in text document clustering. Reduction in dimensionality of attributes using ontology helps to produce high quality clusters for a dataset. However, ontology-based approaches in clustering numerical datasets have not been gained enough attention. Moreover, some literature mentions that ontology-based clustering can produce either high quality or low-quality clusters from a dataset. Therefore, in this paper we present a clustering approach that is based on domain ontology to reduce the dimensionality of attributes in a numerical dataset using domain ontology and to produce high quality clusters. For every dataset, we produce three datasets using domain ontology. We then cluster these datasets using a genetic algorithm-based clustering technique called GenClust++. The clusters of each dataset are evaluated in terms of Sum of Squared-Error (SSE). We use six numerical datasets to evaluate the performance of our ontology-based approach. The experimental results of our approach indicate that cluster quality gradually improves from lower to the higher levels of a domain ontology.


A Revenue Function for Comparison-Based Hierarchical Clustering

arXiv.org Artificial Intelligence

Comparison-based learning addresses the problem of learning when, instead of explicit features or pairwise similarities, one only has access to comparisons of the form: \emph{Object $A$ is more similar to $B$ than to $C$.} Recently, it has been shown that, in Hierarchical Clustering, single and complete linkage can be directly implemented using only such comparisons while several algorithms have been proposed to emulate the behaviour of average linkage. Hence, finding hierarchies (or dendrograms) using only comparisons is a well understood problem. However, evaluating their meaningfulness when no ground-truth nor explicit similarities are available remains an open question. In this paper, we bridge this gap by proposing a new revenue function that allows one to measure the goodness of dendrograms using only comparisons. We show that this function is closely related to Dasgupta's cost for hierarchical clustering that uses pairwise similarities. On the theoretical side, we use the proposed revenue function to resolve the open problem of whether one can approximately recover a latent hierarchy using few triplet comparisons. On the practical side, we present principled algorithms for comparison-based hierarchical clustering based on the maximisation of the revenue and we empirically compare them with existing methods.


Graph Laplacians on Shared Nearest Neighbor graphs and graph Laplacians on $k$-Nearest Neighbor graphs having the same limit

arXiv.org Machine Learning

A Shared Nearest Neighbor (SNN) graph is a type of graph construction using shared nearest neighbor information, which is a secondary similarity measure based on the rankings induced by a primary $k$-nearest neighbor ($k$-NN) measure. SNN measures have been touted as being less prone to the curse of dimensionality than conventional distance measures, and thus methods using SNN graphs have been widely used in applications, particularly in clustering high-dimensional data sets and in finding outliers in subspaces of high dimensional data. Despite this, the theoretical study of SNN graphs and graph Laplacians remains unexplored. In this pioneering work, we make the first contribution in this direction. We show that large scale asymptotics of an SNN graph Laplacian reach a consistent continuum limit; this limit is the same as that of a $k$-NN graph Laplacian. Moreover, we show that the pointwise convergence rate of the graph Laplacian is linear with respect to $(k/n)^{1/m}$ with high probability.


Differentially Private Vertical Federated Clustering

arXiv.org Artificial Intelligence

In many applications, multiple parties have private data regarding the same set of users but on disjoint sets of attributes, and a server wants to leverage the data to train a model. To enable model learning while protecting the privacy of the data subjects, we need vertical federated learning (VFL) techniques, where the data parties share only information for training the model, instead of the private data. However, it is challenging to ensure that the shared information maintains privacy while learning accurate models. To the best of our knowledge, the algorithm proposed in this paper is the first practical solution for differentially private vertical federated k-means clustering, where the server can obtain a set of global centers with a provable differential privacy guarantee. Our algorithm assumes an untrusted central server that aggregates differentially private local centers and membership encodings from local data parties. It builds a weighted grid as the synopsis of the global dataset based on the received information. Final centers are generated by running any k-means algorithm on the weighted grid. Our approach for grid weight estimation uses a novel, light-weight, and differentially private set intersection cardinality estimation algorithm based on the Flajolet-Martin sketch. To improve the estimation accuracy in the setting with more than two data parties, we further propose a refined version of the weights estimation algorithm and a parameter tuning strategy to reduce the final k-means utility to be close to that in the central private setting. We provide theoretical utility analysis and experimental evaluation results for the cluster centers computed by our algorithm and show that our approach performs better both theoretically and empirically than the two baselines based on existing techniques.


Adaptive SpikeDeep-Classifier: Self-organizing and self-supervised machine learning algorithm for online spike sorting

arXiv.org Artificial Intelligence

Objective. Research on brain-computer interfaces (BCIs) is advancing towards rehabilitating severely disabled patients in the real world. Two key factors for successful decoding of user intentions are the size of implanted microelectrode arrays and a good online spike sorting algorithm. A small but dense microelectrode array with 3072 channels was recently developed for decoding user intentions. The process of spike sorting determines the spike activity (SA) of different sources (neurons) from recorded neural data. Unfortunately, current spike sorting algorithms are unable to handle the massively increasing amount of data from dense microelectrode arrays, making spike sorting a fragile component of the online BCI decoding framework. Approach. We proposed an adaptive and self-organized algorithm for online spike sorting, named Adaptive SpikeDeep-Classifier (Ada-SpikeDeepClassifier), which uses SpikeDeeptector for channel selection, an adaptive background activity rejector (Ada-BAR) for discarding background events, and an adaptive spike classifier (Ada-Spike classifier) for classifying the SA of different neural units. Results. Our algorithm outperformed our previously published SpikeDeep-Classifier and eight other spike sorting algorithms, as evaluated on a human dataset and a publicly available simulated dataset. Significance. The proposed algorithm is the first spike sorting algorithm that automatically learns the abrupt changes in the distribution of noise and SA. It is an artificial neural network-based algorithm that is well-suited for hardware implementation on neuromorphic chips that can be used for wearable invasive BCIs.


Deep Incomplete Multi-view Clustering with Cross-view Partial Sample and Prototype Alignment

arXiv.org Artificial Intelligence

The success of existing multi-view clustering relies on the assumption of sample integrity across multiple views. However, in real-world scenarios, samples of multi-view are partially available due to data corruption or sensor failure, which leads to incomplete multi-view clustering study (IMVC). Although several attempts have been proposed to address IMVC, they suffer from the following drawbacks: i) Existing methods mainly adopt cross-view contrastive learning forcing the representations of each sample across views to be exactly the same, which might ignore view discrepancy and flexibility in representations; ii) Due to the absence of non-observed samples across multiple views, the obtained prototypes of clusters might be unaligned and biased, leading to incorrect fusion. To address the above issues, we propose a Cross-view Partial Sample and Prototype Alignment Network (CPSPAN) for Deep Incomplete Multi-view Clustering. Firstly, unlike existing contrastive-based methods, we adopt pair-observed data alignment as 'proxy supervised signals' to guide instance-to-instance correspondence construction among views. Then, regarding of the shifted prototypes in IMVC, we further propose a prototype alignment module to achieve incomplete distribution calibration across views. Extensive experimental results showcase the effectiveness of our proposed modules, attaining noteworthy performance improvements when compared to existing IMVC competitors on benchmark datasets.


MHCCL: Masked Hierarchical Cluster-Wise Contrastive Learning for Multivariate Time Series

arXiv.org Artificial Intelligence

Learning semantic-rich representations from raw unlabeled time series data is critical for downstream tasks such as classification and forecasting. Contrastive learning has recently shown its promising representation learning capability in the absence of expert annotations. However, existing contrastive approaches generally treat each instance independently, which leads to false negative pairs that share the same semantics. To tackle this problem, we propose MHCCL, a Masked Hierarchical Cluster-wise Contrastive Learning model, which exploits semantic information obtained from the hierarchical structure consisting of multiple latent partitions for multivariate time series. Motivated by the observation that fine-grained clustering preserves higher purity while coarse-grained one reflects higher-level semantics, we propose a novel downward masking strategy to filter out fake negatives and supplement positives by incorporating the multi-granularity information from the clustering hierarchy. In addition, a novel upward masking strategy is designed in MHCCL to remove outliers of clusters at each partition to refine prototypes, which helps speed up the hierarchical clustering process and improves the clustering quality. We conduct experimental evaluations on seven widely-used multivariate time series datasets. The results demonstrate the superiority of MHCCL over the state-of-the-art approaches for unsupervised time series representation learning.


Selective experience replay compression using coresets for lifelong deep reinforcement learning in medical imaging

arXiv.org Artificial Intelligence

Selective experience replay is a popular strategy for integrating lifelong learning with deep reinforcement learning. Selective experience replay aims to recount selected experiences from previous tasks to avoid catastrophic forgetting. Furthermore, selective experience replay based techniques are model agnostic and allow experiences to be shared across different models. However, storing experiences from all previous tasks make lifelong learning using selective experience replay computationally very expensive and impractical as the number of tasks increase. To that end, we propose a reward distribution-preserving coreset compression technique for compressing experience replay buffers stored for selective experience replay. We evaluated the coreset compression technique on the brain tumor segmentation (BRATS) dataset for the task of ventricle localization and on the whole-body MRI for localization of left knee cap, left kidney, right trochanter, left lung, and spleen. The coreset lifelong learning models trained on a sequence of 10 different brain MR imaging environments demonstrated excellent performance localizing the ventricle with a mean pixel error distance of 12.93 for the compression ratio of 10x. In comparison, the conventional lifelong learning model localized the ventricle with a mean pixel distance of 10.87. Similarly, the coreset lifelong learning models trained on whole-body MRI demonstrated no significant difference (p=0.28) between the 10x compressed coreset lifelong learning models and conventional lifelong learning models for all the landmarks. The mean pixel distance for the 10x compressed models across all the landmarks was 25.30, compared to 19.24 for the conventional lifelong learning models. Our results demonstrate that the potential of the coreset-based ERB compression method for compressing experiences without a significant drop in performance.