Inductive Learning
Efficient PAC Learnability of Dynamical Systems Over Multilayer Networks
Qiu, Zirou, Adiga, Abhijin, Marathe, Madhav V., Ravi, S. S., Rosenkrantz, Daniel J., Stearns, Richard E., Vullikanti, Anil
Networked dynamical systems are widely used as formal models of real-world cascading phenomena, such as the spread of diseases and information. Prior research has addressed the problem of learning the behavior of an unknown dynamical system when the underlying network has a single layer. In this work, we study the learnability of dynamical systems over multilayer networks, which are more realistic and challenging. First, we present an efficient PAC learning algorithm with provable guarantees to show that the learner only requires a small number of training examples to infer an unknown system. We further provide a tight analysis of the Natarajan dimension which measures the model complexity. Asymptotically, our bound on the Nararajan dimension is tight for almost all multilayer graphs. The techniques and insights from our work provide the theoretical foundations for future investigations of learning problems for multilayer dynamical systems.
Fine-tuning Protein Language Models with Deep Mutational Scanning improves Variant Effect Prediction
Lafita, Aleix, Gonzalez, Ferran, Hossam, Mahmoud, Smyth, Paul, Deasy, Jacob, Allyn-Feuer, Ari, Seaton, Daniel, Young, Stephen
Protein Language Models (PLMs) have emerged as performant and scalable tools for predicting the functional impact and clinical significance of protein-coding variants, but they still lag experimental accuracy. Here, we present a novel fine-tuning approach to improve the performance of PLMs with experimental maps of variant effects from Deep Mutational Scanning (DMS) assays using a Normalised Log-odds Ratio (NLR) head. We find consistent improvements in a held-out protein test set, and on independent DMS and clinical variant annotation benchmarks from ProteinGym and ClinVar. These findings demonstrate that DMS is a promising source of sequence diversity and supervised training data for improving the performance of PLMs for variant effect prediction.
Informed Decision-Making through Advancements in Open Set Recognition and Unknown Sample Detection
Mahdavi, Atefeh, Carvalho, Marco
Machine learning-based techniques open up many opportunities and improvements to derive deeper and more practical insights from data that can help businesses make informed decisions. However, the majority of these techniques focus on the conventional closed-set scenario, in which the label spaces for the training and test sets are identical. Open set recognition (OSR) aims to bring classification tasks in a situation that is more like reality, which focuses on classifying the known classes as well as handling unknown classes effectively. In such an open-set problem the gathered samples in the training set cannot encompass all the classes and the system needs to identify unknown samples at test time. On the other hand, building an accurate and comprehensive model in a real dynamic environment presents a number of obstacles, because it is prohibitively expensive to train for every possible example of unknown items, and the model may fail when tested in testbeds. This study provides an algorithm exploring a new representation of feature space to improve classification in OSR tasks. The efficacy and efficiency of business processes and decision-making can be improved by integrating OSR, which offers more precise and insightful predictions of outcomes. We demonstrate the performance of the proposed method on three established datasets. The results indicate that the proposed model outperforms the baseline methods in accuracy and F1-score.
A review on discriminative self-supervised learning methods
Giakoumoglou, Nikolaos, Stathaki, Tania
In the field of computer vision, self-supervised learning has emerged as a method to extract robust features from unlabeled data, where models derive labels autonomously from the data itself, without the need for manual annotation. This paper provides a comprehensive review of discriminative approaches of self-supervised learning within the domain of computer vision, examining their evolution and current status. Through an exploration of various methods including contrastive, self-distillation, knowledge distillation, feature decorrelation, and clustering techniques, we investigate how these approaches leverage the abundance of unlabeled data. Finally, we have comparison of self-supervised learning methods on the standard ImageNet classification benchmark.
FedSC: Provable Federated Self-supervised Learning with Spectral Contrastive Objective over Non-i.i.d. Data
Jing, Shusen, Yu, Anlan, Zhang, Shuai, Zhang, Songyang
Recent efforts have been made to integrate self-supervised learning (SSL) with the framework of federated learning (FL). One unique challenge of federated self-supervised learning (FedSSL) is that the global objective of FedSSL usually does not equal the weighted sum of local SSL objectives. Consequently, conventional approaches, such as federated averaging (FedAvg), fail to precisely minimize the FedSSL global objective, often resulting in suboptimal performance, especially when data is non-i.i.d.. To fill this gap, we propose a provable FedSSL algorithm, named FedSC, based on the spectral contrastive objective. In FedSC, clients share correlation matrices of data representations in addition to model weights periodically, which enables inter-client contrast of data samples in addition to intra-client contrast and contraction, resulting in improved quality of data representations. Differential privacy (DP) protection is deployed to control the additional privacy leakage on local datasets when correlation matrices are shared. We also provide theoretical analysis on the convergence and extra privacy leakage. The experimental results validate the effectiveness of our proposed algorithm.
Telextiles: End-to-end Remote Transmission of Fabric Tactile Sensation
Kitagishi, Takekazu, Hiroi, Yuichi, Watanabe, Yuna, Itoh, Yuta, Rekimoto, Jun
The tactile sensation of textiles is critical in determining the comfort of clothing. For remote use, such as online shopping, users cannot physically touch the textile of clothes, making it difficult to evaluate its tactile sensation. Tactile sensing and actuation devices are required to transmit the tactile sensation of textiles. The sensing device needs to recognize different garments, even with hand-held sensors. In addition, the existing actuation device can only present a limited number of known patterns and cannot transmit unknown tactile sensations of textiles. To address these issues, we propose Telextiles, an interface that can remotely transmit tactile sensations of textiles by creating a latent space that reflects the proximity of textiles through contrastive self-supervised learning. We confirm that textiles with similar tactile features are located close to each other in the latent space through a two-dimensional plot. We then compress the latent features for known textile samples into the 1D distance and apply the 16 textile samples to the rollers in the order of the distance. The roller is rotated to select the textile with the closest feature if an unknown textile is detected.
Multi-Modality Spatio-Temporal Forecasting via Self-Supervised Learning
Deng, Jiewen, Jiang, Renhe, Zhang, Jiaqi, Song, Xuan
Multi-modality spatio-temporal (MoST) data extends spatio-temporal (ST) data by incorporating multiple modalities, which is prevalent in monitoring systems, encompassing diverse traffic demands and air quality assessments. Despite significant strides in ST modeling in recent years, there remains a need to emphasize harnessing the potential of information from different modalities. Robust MoST forecasting is more challenging because it possesses (i) high-dimensional and complex internal structures and (ii) dynamic heterogeneity caused by temporal, spatial, and modality variations. In this study, we propose a novel MoST learning framework via Self-Supervised Learning, namely MoSSL, which aims to uncover latent patterns from temporal, spatial, and modality perspectives while quantifying dynamic heterogeneity. Experiment results on two real-world MoST datasets verify the superiority of our approach compared with the state-of-the-art baselines. Model implementation is available at https://github.com/beginner-sketch/MoSSL.
Learning label-label correlations in Extreme Multi-label Classification via Label Features
Kharbanda, Siddhant, Gupta, Devaansh, Schultheis, Erik, Banerjee, Atmadeep, Hsieh, Cho-Jui, Babbar, Rohit
Extreme Multi-label Text Classification (XMC) involves learning a classifier that can assign an input with a subset of most relevant labels from millions of label choices. Recent works in this domain have increasingly focused on a symmetric problem setting where both input instances and label features are short-text in nature. Short-text XMC with label features has found numerous applications in areas such as query-to-ad-phrase matching in search ads, title-based product recommendation, prediction of related searches. In this paper, we propose Gandalf, a novel approach which makes use of a label co-occurrence graph to leverage label features as additional data points to supplement the training distribution. By exploiting the characteristics of the short-text XMC problem, it leverages the label features to construct valid training instances, and uses the label graph for generating the corresponding soft-label targets, hence effectively capturing the label-label correlations. Surprisingly, models trained on these new training instances, although being less than half of the original dataset, can outperform models trained on the original dataset, particularly on the PSP@k metric for tail labels. With this insight, we aim to train existing XMC algorithms on both, the original and new training instances, leading to an average 5% relative improvements for 6 state-of-the-art algorithms across 4 benchmark datasets consisting of up to 1.3M labels. Gandalf can be applied in a plug-and-play manner to various methods and thus forwards the state-of-the-art in the domain, without incurring any additional computational overheads.
Reinforcement Learning-Guided Semi-Supervised Learning
Heidari, Marzi, Zhang, Hanping, Guo, Yuhong
In recent years, semi-supervised learning (SSL) has gained significant attention due to its ability to leverage both labeled and unlabeled data to improve model performance, especially when labeled data is scarce. However, most current SSL methods rely on heuristics or predefined rules for generating pseudo-labels and leveraging unlabeled data. They are limited to exploiting loss functions and regularization methods within the standard norm. In this paper, we propose a novel Reinforcement Learning (RL) Guided SSL method, RLGSSL, that formulates SSL as a one-armed bandit problem and deploys an innovative RL loss based on weighted reward to adaptively guide the learning process of the prediction model. RLGSSL incorporates a carefully designed reward function that balances the use of labeled and unlabeled data to enhance generalization performance. A semi-supervised teacher-student framework is further deployed to increase the learning stability. We demonstrate the effectiveness of RLGSSL through extensive experiments on several benchmark datasets and show that our approach achieves consistent superior performance compared to state-of-the-art SSL methods.
Self-Supervised Learning for Interventional Image Analytics: Towards Robust Device Trackers
Islam, Saahil, Murthy, Venkatesh N., Neumann, Dominik, Das, Badhan Kumar, Sharma, Puneet, Maier, Andreas, Comaniciu, Dorin, Ghesu, Florin C.
An accurate detection and tracking of devices such as guiding catheters in live X-ray image acquisitions is an essential prerequisite for endovascular cardiac interventions. This information is leveraged for procedural guidance, e.g., directing stent placements. To ensure procedural safety and efficacy, there is a need for high robustness no failures during tracking. To achieve that, one needs to efficiently tackle challenges, such as: device obscuration by contrast agent or other external devices or wires, changes in field-of-view or acquisition angle, as well as the continuous movement due to cardiac and respiratory motion. To overcome the aforementioned challenges, we propose a novel approach to learn spatio-temporal features from a very large data cohort of over 16 million interventional X-ray frames using self-supervision for image sequence data. Our approach is based on a masked image modeling technique that leverages frame interpolation based reconstruction to learn fine inter-frame temporal correspondences. The features encoded in the resulting model are fine-tuned downstream. Our approach achieves state-of-the-art performance and in particular robustness compared to ultra optimized reference solutions (that use multi-stage feature fusion, multi-task and flow regularization). The experiments show that our method achieves 66.31% reduction in maximum tracking error against reference solutions (23.20% when flow regularization is used); achieving a success score of 97.95% at a 3x faster inference speed of 42 frames-per-second (on GPU). The results encourage the use of our approach in various other tasks within interventional image analytics that require effective understanding of spatio-temporal semantics.