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Score-basedGenerativeNeuralNetworksfor Large-ScaleOptimalTransport

Neural Information Processing Systems

Comparison of statistical distances can also enable distribution testing, quantification of distribution shifts, and provide methods to correct for distribution shift through domainadaptation[12]. Optimal transport theory provides a rich set of tools for comparing distributions inWasserstein Distance.


Learning to Emulate Chaos: Adversarial Optimal Transport Regularization

Melo, Gabriel, Santiago, Leonardo, Lu, Peter Y.

arXiv.org Machine Learning

Chaos arises in many complex dynamical systems, from weather to power grids, but is difficult to accurately model using data-driven emulators, including neural operator architectures. For chaotic systems, the inherent sensitivity to initial conditions makes exact long-term forecasts theoretically infeasible, meaning that traditional squared-error losses often fail when trained on noisy data. Recent work has focused on training emulators to match the statistical properties of chaotic attractors by introducing regularization based on handcrafted local features and summary statistics, as well as learned statistics extracted from a diverse dataset of trajectories. In this work, we propose a family of adversarial optimal transport objectives that jointly learn high-quality summary statistics and a physically consistent emulator. We theoretically analyze and experimentally validate a Sinkhorn divergence formulation (2-Wasserstein) and a WGAN-style dual formulation (1-Wasserstein). Our experiments across a variety of chaotic systems, including systems with high-dimensional chaotic attractors, show that emulators trained with our approach exhibit significantly improved long-term statistical fidelity.


Discrete Tilt Matching

Chen, Yuyuan, Wang, Shiyi, Potaptchik, Peter, Kim, Jaeyeon, Albergo, Michael S.

arXiv.org Machine Learning

Masked diffusion large language models (dLLMs) are a promising alternative to autoregressive generation. While reinforcement learning (RL) methods have recently been adapted to dLLM fine-tuning, their objectives typically depend on sequence-level marginal likelihoods, which are intractable for masked diffusion models. To address this, we derive Discrete Tilt Matching (DTM), a likelihood-free method that recasts dLLM fine-tuning as state-level matching of local unmasking posteriors under reward tilting. DTM takes the form of a weighted cross-entropy objective with explicit minimizer, and admits control variates that improve training stability. On a synthetic maze-planning task, we analyze how DTM's annealing schedule and control variates affect training stability and prevent mode collapse. At scale, fine-tuning LLaDA-8B-Instruct with DTM yields strong gains on Sudoku and Countdown while remaining competitive on MATH500 and GSM8K.


Local Linearity of LLMs Enables Activation Steering via Model-Based Linear Optimal Control

Skifstad, Julian, Yang, Xinyue Annie, Chou, Glen

arXiv.org Machine Learning

Inference-time LLM alignment methods, particularly activation steering, offer an alternative to fine-tuning by directly modifying activations during generation. Existing methods, however, often rely on non-anticipative interventions that ignore how perturbations propagate through transformer layers and lack online error feedback, resulting in suboptimal, open-loop control. To address this, we show empirically that, despite the nonlinear structure of transformer blocks, layer-wise dynamics across multiple LLM architectures and scales are well-approximated by locally-linear models. Exploiting this property, we model LLM inference as a linear time-varying dynamical system and adapt the classical linear quadratic regulator to compute feedback controllers using layer-wise Jacobians, steering activations toward desired semantic setpoints in closed-loop with minimal computational overhead and no offline training. We also derive theoretical bounds on setpoint tracking error, enabling formal guarantees on steering performance. Using a novel adaptive semantic feature setpoint signal, our method yields robust, fine-grained behavior control across models, scales, and tasks, including state-of-the-art modulation of toxicity, truthfulness, refusal, and arbitrary concepts, surpassing baseline steering methods. Our code is available at: https://github.com/trustworthyrobotics/lqr-activation-steering


Calibrating Scientific Foundation Models with Inference-Time Stochastic Attention

Yadav, Akash, Adebiyi, Taiwo A., Zhang, Ruda

arXiv.org Machine Learning

Transformer-based scientific foundation models are increasingly deployed in high-stakes settings, but current architectures give deterministic outputs and provide limited support for calibrated predictive uncertainty. We propose Stochastic Attention, a lightweight inference-time modification that randomizes attention by replacing softmax weights with normalized multinomial samples controlled by a single concentration parameter, and produces predictive ensembles without retraining. To set this parameter, we introduce a calibration objective that matches the stochastic attention output with the target, yielding an efficient univariate post-hoc tuning problem. We evaluate this mechanism on two scientific foundation models for weather and timeseries forecasting along with an additional regression task. Across benchmarks against uncertainty-aware baselines, we find that Stochastic Attention achieves the strongest native calibration and the sharpest prediction intervals at comparable coverage, while requiring only minutes of post-hoc tuning versus days of retraining for competitive baselines.


Contraction and Hourglass Persistence for Learning on Graphs, Simplices, and Cells

Ji, Mattie, Roy, Indradyumna, Garg, Vikas

arXiv.org Machine Learning

Persistent homology (PH) encodes global information, such as cycles, and is thus increasingly integrated into graph neural networks (GNNs). PH methods in GNNs typically traverse an increasing sequence of subgraphs. In this work, we first expose limitations of this inclusion procedure. To remedy these shortcomings, we analyze contractions as a principled topological operation, in particular, for graph representation learning. We study the persistence of contraction sequences, which we call Contraction Homology (CH). We establish that forward PH and CH differ in expressivity. We then introduce Hourglass Persistence, a class of topological descriptors that interleave a sequence of inclusions and contractions to boost expressivity, learnability, and stability. We also study related families parametrized by two paradigms. We also discuss how our framework extends to simplicial and cellular networks. We further design efficient algorithms that are pluggable into end-to-end differentiable GNN pipelines, enabling consistent empirical improvements over many PH methods across standard real-world graph datasets. Code is available at \href{https://github.com/Aalto-QuML/Hourglass}{this https URL}.


FUSE: Ensembling Verifiers with Zero Labeled Data

Lee, Joonhyuk, Ma, Virginia, Zhao, Sarah, Nair, Yash, Spector, Asher, Cohen, Regev, Candès, Emmanuel J.

arXiv.org Machine Learning

Verification of model outputs is rapidly emerging as a key primitive for both training and real-world deployment of large language models (LLMs). In practice, this often involves using imperfect LLM judges and reward models since ground truth acquisition can be time-consuming and expensive. We introduce Fully Unsupervised Score Ensembling (FUSE), a method for improving verification quality by ensembling verifiers without access to ground truth correctness labels. The key idea behind FUSE is to control conditional dependencies between verifiers in a manner that improves the unsupervised performance of a class of spectral algorithms from the ensembling literature. Despite requiring zero ground truth labels, FUSE typically matches or improves upon semi-supervised alternatives in test-time scaling experiments with diverse sets of generator models, verifiers, and benchmarks. In particular, we validate our method on both conventional academic benchmarks such as GPQA Diamond and on frontier, unsaturated benchmarks such as Humanity's Last Exam and IMO Shortlist questions.


Prior-Fitted Functional Flow: In-Context Generative Models for Pharmacokinetics

Ojeda, César, Hartung, Niklas, Huisinga, Wilhelm, Jahn, Tim, Kavwele, Purity Kamene, Klose, Marian, Kumar, Piyush, Sánchez, Ramsés J., Faroughy, Darius A.

arXiv.org Machine Learning

We introduce Prior-Fitted Functional Flows, a generative foundation model for pharmacokinetics that enables zero-shot population synthesis and individual forecasting without manual parameter tuning. We learn functional vector fields, explicitly conditioned on the sparse, irregular data of an entire study population. This enables the generation of coherent virtual cohorts as well as forecasting of partially observed patient trajectories with calibrated uncertainty. We construct a new open-access literature corpus to inform our priors, and demonstrate state-of-the-art predictive accuracy on extensive real-world datasets.


DARLING: Detection Augmented Reinforcement Learning with Non-Stationary Guarantees

Gerogiannis, Argyrios, Huang, Yu-Han, Veeravalli, Venugopal V.

arXiv.org Machine Learning

We study model-free reinforcement learning (RL) in non-stationary finite-horizon episodic Markov decision processes (MDPs) without prior knowledge of the non-stationarity. We focus on the piecewise-stationary (PS) setting, where both the reward and transition dynamics can change an arbitrary number of times. We propose Detection Augmented Reinforcement Learning (DARLING), a modular wrapper for PS-RL that applies to both tabular and linear MDPs, without knowledge of the changes. Under certain change-point separation and reachability conditions, DARLING improves the best available dynamic regret bounds in both settings and yields strong empirical performance. We further establish the first minimax lower bounds for PS-RL in tabular and linear MDPs, showing that DARLING is the first nearly optimal algorithm. Experiments on standard benchmarks demonstrate that DARLING consistently surpasses the state-of-the-art methods across diverse non-stationary scenarios.


LASER: Low-Rank Activation SVD for Efficient Recursion

Çakar, Ege, Raghu, Ketan Ali, Zheng, Lia

arXiv.org Machine Learning

Recursive architectures such as Tiny Recursive Models (TRMs) perform implicit reasoning through iterative latent computation, yet the geometric structure of these reasoning trajectories remains poorly understood. We investigate the activation manifold of TRMs during recursive unrolling and find that activations occupy an effectively linear, low-dimensional subspace whose principal directions can be tracked dynamically with cheap power iterations. This suggests that weight-sharing concentrates iterative computation along a small number of dominant eigendirections, and we find that this concentration varies sharply across computational sites. We exploit this structure through LASER (Low-Rank Activation SVD for Efficient Recursion), a dynamic compression framework that maintains an evolving low-rank basis via matrix-free subspace tracking with a fidelity-triggered reset mechanism, achieving ${\sim}60\%$ activation memory savings with no statistically significant accuracy degradation. Our analysis raises questions about how recursive architectures allocate representational capacity during implicit reasoning, and whether this concentration can be exploited to improve the efficiency and stability of latent computation.