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U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging

Neural Information Processing Systems

Neural networks are becoming more and more popular for the analysis of physiological time-series. The most successful deep learning systems in this domain combine convolutional and recurrent layers to extract useful features to model temporal relations. Unfortunately, these recurrent models are difficult to tune and optimize. In our experience, they often require task-specific modifications, which makes them challenging to use for non-experts. We propose U-Time, a fully feed-forward deep learning approach to physiological time series segmentation developed for the analysis of sleep data.





57bafb2c2dfeefba931bb03a835b1fa9-AuthorFeedback.pdf

Neural Information Processing Systems

Thank you for your feedback. Thus, the cited results are prone to (unintentional) method overfitting. N1 lies between wake and deeper non-REM sleep, and the transitions are gradual. Y es, we used only one channel for a fair comparison to existing literature. Details of the layers can be found in the supplement Table S.2.


U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging

Neural Information Processing Systems

Neural networks are becoming more and more popular for the analysis of physiological time-series. The most successful deep learning systems in this domain combine convolutional and recurrent layers to extract useful features to model temporal relations. Unfortunately, these recurrent models are difficult to tune and optimize. In our experience, they often require task-specific modifications, which makes them challenging to use for non-experts. We propose U-Time, a fully feed-forward deep learning approach to physiological time series segmentation developed for the analysis of sleep data.


Quantifying the Impact of Data Characteristics on the Transferability of Sleep Stage Scoring Models

Supratak, Akara, Haddawy, Peter

arXiv.org Artificial Intelligence

Deep learning models for scoring sleep stages based on single-channel EEG have been proposed as a promising method for remote sleep monitoring. However, applying these models to new datasets, particularly from wearable devices, raises two questions. First, when annotations on a target dataset are unavailable, which different data characteristics affect the sleep stage scoring performance the most and by how much? Second, when annotations are available, which dataset should be used as the source of transfer learning to optimize performance? In this paper, we propose a novel method for computationally quantifying the impact of different data characteristics on the transferability of deep learning models. Quantification is accomplished by training and evaluating two models with significant architectural differences, TinySleepNet and U-Time, under various transfer configurations in which the source and target datasets have different recording channels, recording environments, and subject conditions. For the first question, the environment had the highest impact on sleep stage scoring performance, with performance degrading by over 14% when sleep annotations were unavailable. For the second question, the most useful transfer sources for TinySleepNet and the U-Time models were MASS-SS1 and ISRUC-SG1, containing a high percentage of N1 (the rarest sleep stage) relative to the others. The frontal and central EEGs were preferred for TinySleepNet. The proposed approach enables full utilization of existing sleep datasets for training and planning model transfer to maximize the sleep stage scoring performance on a target problem when sleep annotations are limited or unavailable, supporting the realization of remote sleep monitoring.


Development of Personalized Sleep Induction System based on Mental States

Kweon, Young-Seok, Shin, Gi-Hwan, Kwak, Heon-Gyu

arXiv.org Artificial Intelligence

Sleep is an essential behavior to prevent the decrement of cognitive, motor, and emotional performance and various diseases. However, it is not easy to fall asleep when people want to sleep. There are various sleep-disturbing factors such as the COVID-19 situation, noise from outside, and light during the night. We aim to develop a personalized sleep induction system based on mental states using electroencephalogram and auditory stimulation. Our system analyzes users' mental states using an electroencephalogram and results of the Pittsburgh sleep quality index and Brunel mood scale. According to mental states, the system plays sleep induction sound among five auditory stimulation: white noise, repetitive beep sounds, rainy sound, binaural beat, and sham sound. Finally, the sleep-inducing system classified the sleep stage of participants with 94.7 percent and stopped auditory stimulation if participants showed non-rapid eye movement sleep. Our system makes 18 participants fall asleep among 20 participants.


U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging

Perslev, Mathias, Jensen, Michael, Darkner, Sune, Jennum, Poul Jørgen, Igel, Christian

Neural Information Processing Systems

Neural networks are becoming more and more popular for the analysis of physiological time-series. The most successful deep learning systems in this domain combine convolutional and recurrent layers to extract useful features to model temporal relations. Unfortunately, these recurrent models are difficult to tune and optimize. In our experience, they often require task-specific modifications, which makes them challenging to use for non-experts. We propose U-Time, a fully feed-forward deep learning approach to physiological time series segmentation developed for the analysis of sleep data.


U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging

Perslev, Mathias, Jensen, Michael Hejselbak, Darkner, Sune, Jennum, Poul Jørgen, Igel, Christian

arXiv.org Machine Learning

Neural networks are becoming more and more popular for the analysis of physiological time-series. The most successful deep learning systems in this domain combine convolutional and recurrent layers to extract useful features to model temporal relations. Unfortunately, these recurrent models are difficult to tune and optimize. In our experience, they often require task-specific modifications, which makes them challenging to use for non-experts. We propose U-Time, a fully feed-forward deep learning approach to physiological time series segmentation developed for the analysis of sleep data. U-Time is a temporal fully convolutional network based on the U-Net architecture that was originally proposed for image segmentation. U-Time maps sequential inputs of arbitrary length to sequences of class labels on a freely chosen temporal scale. This is done by implicitly classifying every individual time-point of the input signal and aggregating these classifications over fixed intervals to form the final predictions. We evaluated U-Time for sleep stage classification on a large collection of sleep electroencephalography (EEG) datasets. In all cases, we found that U-Time reaches or outperforms current state-of-the-art deep learning models while being much more robust in the training process and without requiring architecture or hyperparameter adaptation across tasks.