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Scalable Unit Harmonization in Medical Informatics via Bayesian-Optimized Retrieval and Transformer-Based Re-ranking

de la Torre, Jordi

arXiv.org Artificial Intelligence

Objective: To develop and evaluate a scalable methodology for harmonizing inconsistent units in large-scale clinical datasets, addressing a key barrier to data interoperability. Materials and Methods: We designed a novel unit harmonization system combining BM25, sentence embeddings, Bayesian optimization, and a bidirectional transformer based binary classifier for retrieving and matching laboratory test entries. The system was evaluated using the Optum Clinformatics Datamart dataset (7.5 billion entries). We implemented a multi-stage pipeline: filtering, identification, harmonization proposal generation, automated re-ranking, and manual validation. Performance was assessed using Mean Reciprocal Rank (MRR) and other standard information retrieval metrics. Results: Our hybrid retrieval approach combining BM25 and sentence embeddings (MRR: 0.8833) significantly outperformed both lexical-only (MRR: 0.7985) and embedding-only (MRR: 0.5277) approaches. The transformer-based reranker further improved performance (absolute MRR improvement: 0.10), bringing the final system MRR to 0.9833. The system achieved 83.39\% precision at rank 1 and 94.66\% recall at rank 5. Discussion: The hybrid architecture effectively leverages the complementary strengths of lexical and semantic approaches. The reranker addresses cases where initial retrieval components make errors due to complex semantic relationships in medical terminology. Conclusion: Our framework provides an efficient, scalable solution for unit harmonization in clinical datasets, reducing manual effort while improving accuracy. Once harmonized, data can be reused seamlessly in different analyses, ensuring consistency across healthcare systems and enabling more reliable multi-institutional studies and meta-analyses.


Triadic Multi-party Voice Activity Projection for Turn-taking in Spoken Dialogue Systems

Elmers, Mikey, Inoue, Koji, Lala, Divesh, Kawahara, Tatsuya

arXiv.org Artificial Intelligence

Turn-taking is a fundamental component of spoken dialogue, however conventional studies mostly involve dyadic settings. This work focuses on applying voice activity projection (VAP) to predict upcoming turn-taking in triadic multi-party scenarios. The goal of VAP models is to predict the future voice activity for each speaker utilizing only acoustic data. This is the first study to extend VAP into triadic conversation. We trained multiple models on a Japanese triadic dataset where participants discussed a variety of topics. We found that the VAP trained on triadic conversation outperformed the baseline for all models but that the type of conversation affected the accuracy. This study establishes that VAP can be used for turn-taking in triadic dialogue scenarios. Future work will incorporate this triadic VAP turn-taking model into spoken dialogue systems.


Robust Orientation Estimation with TRIAD-aided Manifold EKF

Sadananda, Arjun, Banavar, Ravi, Arya, Kavi

arXiv.org Artificial Intelligence

Abstract-- The manifold extended Kalman filter (Manifold EKF) has found extensive application for attitude determination. Magnetometers employed as sensors for such attitude determination are easily prone to disturbances by their sensitivity to calibration and external magnetic fields. The TRIAD (Tri-Axial Attitude Determination) algorithm is well-known as a sub-optimal attitude estimator . In this article, we incorporate this sub-optimal feature of the TRIAD in mitigating the influence of the magnetometer reading in the pitch and roll axis determination in the Manifold EKF algorithm. We substantiate our results with experiments. Accurate orientation estimation is critical for a wide range of applications, such as in Unmanned Aerial V ehicles (UA Vs), mobile devices and robotics. Numerous studies have been dedicated to improving sensor orientation estimation.


Triad: Vision Foundation Model for 3D Magnetic Resonance Imaging

Wang, Shansong, Safari, Mojtaba, Li, Qiang, Chang, Chih-Wei, Qiu, Richard LJ, Roper, Justin, Yu, David S., Yang, Xiaofeng

arXiv.org Artificial Intelligence

Vision foundation models (VFMs) are pre-trained on extensive image datasets to learn general representations for diverse types of data. These models can subsequently be fine-tuned for specific downstream tasks, significantly boosting performance across a broad range of applications. However, existing vision foundation models that claim to be applicable to various clinical tasks are mostly pre-trained on 3D computed tomography (CT), which benefits from the availability of extensive 3D CT databases. Significant differences between CT and magnetic resonance imaging (MRI) in imaging principles, signal characteristics, and data distribution may hinder their practical performance and versatility in MRI-specific applications. Here, we propose Triad, a vision foundation model for 3D MRI. Triad adopts a widely used autoencoder architecture to learn robust representations from 131,170 3D MRI volumes and uses organ-independent imaging descriptions to constrain the semantic distribution of the visual modality. The above pre-training dataset is called Triad-131K, which is currently the largest 3D MRI pre-training dataset. We evaluate Triad across three tasks, namely, organ/tumor segmentation, organ/cancer classification, and medical image registration, in two data modalities (within-domain and out-of-domain) settings using 25 downstream datasets. By initializing models with Triad's pre-trained weights, nnUNet-Triad improves segmentation performance by 2.51% compared to nnUNet-Scratch across 17 datasets. Swin-B-Triad achieves a 3.97% improvement over Swin-B-Scratch in classification tasks across five datasets. SwinUNETR-Triad improves by 4.00% compared to SwinUNETR-Scratch in registration tasks across two datasets. Our study demonstrates that pre-training can improve performance when the data modalities and organs of upstream and downstream tasks are consistent.


Large Language Models can Achieve Social Balance

Cisneros-Velarde, Pedro

arXiv.org Artificial Intelligence

Social balance is a concept in sociology which states that if every three individuals in a population achieve certain structures of positive or negative interactions, then the whole population ends up in one faction of positive interactions or divided between two or more antagonistic factions. In this paper, we consider a group of interacting large language models (LLMs) and study how, after continuous interactions, they can achieve social balance. Across three different LLM models, we found that social balance depends on (i) whether interactions are updated based on "relationships", "appraisals", or "opinions"; (ii) whether agents update their interactions based on homophily or influence from their peers; and (iii) the number of simultaneous interactions the LLMs consider. When social balance is achieved, its particular structure of positive or negative interactions depends on these three conditions and are different across LLM models and sizes. The stability of interactions and the justification for their update also vary across models. Thus, social balance is driven by the pre-training and alignment particular to each LLM model.


An Overview and Comparison of Axiomatization Structures Regarding Inconsistency Indices' Properties in Pairwise Comparisons Methods

Pant, Sangeeta, Kumar, Anuj, Mazurek, Jiří

arXiv.org Artificial Intelligence

Mathematical analysis of the analytic hierarchy process (AHP) led to the development of a mathematical function, usually called the inconsistency index, which has the center role in measuring the inconsistency of the judgements in AHP. Inconsistency index is a mathematical function which maps every pairwise comparison matrix (PCM) into a real number. An inconsistency index can be considered more trustworthy when it satisfies a set of suitable properties. Therefore, the research community has been trying to postulate a set of desirable rules (axioms, properties) for inconsistency indices. Subsequently, many axiomatic frameworks for these functions have been suggested independently, however, the literature on the topic is fragmented and missing a broader framework. Therefore, the objective of this article is twofold. Firstly, we provide a comprehensive review of the advancements in the axiomatization of inconsistency indices' properties during the last decade. Secondly, we provide a comparison and discussion of the aforementioned axiomatic structures along with directions of the future research.


Computational music analysis from first principles

Tymoczko, Dmitri, Newman, Mark

arXiv.org Artificial Intelligence

We use coupled hidden Markov models to automatically annotate the 371 Bach chorales in the Riemenschneider edition, a corpus containing approximately 100,000 notes and 20,000 chords. We give three separate analyses that achieve progressively greater accuracy at the cost of making increasingly strong assumptions about musical syntax. Although our method makes almost no use of human input, we are able to identify both chords and keys with an accuracy of 85% or greater when compared to an expert human analysis, resulting in annotations accurate enough to be used for a range of music-theoretical purposes, while also being free of subjective human judgments. Our work bears on longstanding debates about the objective reality of the structures postulated by standard Western harmonic theory, as well as on specific questions about the nature of Western harmonic syntax.


Multimodal LLMs Struggle with Basic Visual Network Analysis: a VNA Benchmark

Williams, Evan M., Carley, Kathleen M.

arXiv.org Artificial Intelligence

We evaluate the zero-shot ability of GPT-4 and LLaVa to perform simple Visual Network Analysis (VNA) tasks on small-scale graphs. We evaluate the Vision Language Models (VLMs) on 5 tasks related to three foundational network science concepts: identifying nodes of maximal degree on a rendered graph, identifying whether signed triads are balanced or unbalanced, and counting components. The tasks are structured to be easy for a human who understands the underlying graph theoretic concepts, and can all be solved by counting the appropriate elements in graphs. We find that while GPT-4 consistently outperforms LLaVa, both models struggle with every visual network analysis task we propose. We publicly release the first benchmark for the evaluation of VLMs on foundational VNA tasks.


Triad: A Framework Leveraging a Multi-Role LLM-based Agent to Solve Knowledge Base Question Answering

Zong, Chang, Yan, Yuchen, Lu, Weiming, Shao, Jian, Huang, Eliot, Chang, Heng, Zhuang, Yueting

arXiv.org Artificial Intelligence

Recent progress with LLM-based agents has shown promising results across various tasks. However, their use in answering questions from knowledge bases remains largely unexplored. Implementing a KBQA system using traditional methods is challenging due to the shortage of task-specific training data and the complexity of creating task-focused model structures. In this paper, we present Triad, a unified framework that utilizes an LLM-based agent with three roles for KBQA tasks. The agent is assigned three roles to tackle different KBQA subtasks: agent as a generalist for mastering various subtasks, as a decision maker for the selection of candidates, and as an advisor for answering questions with knowledge. Our KBQA framework is executed in four phases, involving the collaboration of the agent's multiple roles. We evaluated the performance of our framework using three benchmark datasets, and the results show that our framework outperforms state-of-the-art systems on the LC-QuAD and YAGO-QA benchmarks, yielding F1 scores of 11.8% and 20.7%, respectively.


New Semantic Task for the French Spoken Language Understanding MEDIA Benchmark

Alavoine, Nadège, Laperriere, Gaëlle, Servan, Christophe, Ghannay, Sahar, Rosset, Sophie

arXiv.org Artificial Intelligence

Intent classification and slot-filling are essential tasks of Spoken Language Understanding (SLU). In most SLUsystems, those tasks are realized by independent modules. For about fifteen years, models achieving both of themjointly and exploiting their mutual enhancement have been proposed. A multilingual module using a joint modelwas envisioned to create a touristic dialogue system for a European project, HumanE-AI-Net. A combination ofmultiple datasets, including the MEDIA dataset, was suggested for training this joint model. The MEDIA SLU datasetis a French dataset distributed since 2005 by ELRA, mainly used by the French research community and free foracademic research since 2020. Unfortunately, it is annotated only in slots but not intents. An enhanced version ofMEDIA annotated with intents has been built to extend its use to more tasks and use cases. This paper presents thesemi-automatic methodology used to obtain this enhanced version. In addition, we present the first results of SLUexperiments on this enhanced dataset using joint models for intent classification and slot-filling.