When turned on, "GitHub Copilot checks code completion suggestions with their surrounding

Pre-trained large language models (LLMs) are becoming useful for various tasks. To improve their performance on certain tasks, it is necessary to fine-tune them on specific data corpora (e.g., medical reports, business data). These specialized data corpora may contain sensitive data (e.g., personal or confidential data) that will be memorized by the model and likely to be regurgitated during its subsequent use. This memorization of sensitive information by the model poses a significant privacy or confidentiality issue. To remove this memorization and sanitize the model without requiring costly additional fine-tuning on a secured data corpus, we propose SANI. SANI is an unlearning approach to sanitize language models. It relies on both an erasure and repair phases that 1) reset certain neurons in the last layers of the model to disrupt the memorization of fine-grained information, and then 2) fine-tune the model while avoiding memorizing sensitive information. We comprehensively evaluate SANI to sanitize both a model fine-tuned and specialized with medical data by removing directly and indirectly identifiers from the memorization of the model, and a standard pre-trained model by removing specific terms defined as confidential information from the model. Results show that with only few additional epochs of unlearning, the model is sanitized and the number of regurgitations is drastically reduced. This approach can be particularly useful for hospitals or other industries that have already spent significant resources training models on large datasets and wish to sanitize them before sharing.

Objective: Fluoropyrimidines are widely prescribed for colorectal and breast cancers, but are associated with toxicities such as hand-foot syndrome and cardiotoxicity. Since toxicity documentation is often embedded in clinical notes, we aimed to develop and evaluate natural language processing (NLP) methods to extract treatment and toxicity information. Materials and Methods: We constructed a gold-standard dataset of 236 clinical notes from 204,165 adult oncology patients. Domain experts annotated categories related to treatment regimens and toxicities. We developed rule-based, machine learning-based (Random Forest, Support Vector Machine [SVM], Logistic Regression [LR]), deep learning-based (BERT, ClinicalBERT), and large language models (LLM)-based NLP approaches (zero-shot and error-analysis prompting). Models used an 80:20 train-test split. Results: Sufficient data existed to train and evaluate 5 annotated categories. Error-analysis prompting achieved optimal precision, recall, and F1 scores (F1=1.000) for treatment and toxicities extraction, whereas zero-shot prompting reached F1=1.000 for treatment and F1=0.876 for toxicities extraction.LR and SVM ranked second for toxicities (F1=0.937). Deep learning underperformed, with BERT (F1=0.873 treatment; F1= 0.839 toxicities) and ClinicalBERT (F1=0.873 treatment; F1 = 0.886 toxicities). Rule-based methods served as our baseline with F1 scores of 0.857 in treatment and 0.858 in toxicities. Discussion: LMM-based approaches outperformed all others, followed by machine learning methods. Machine and deep learning approaches were limited by small training data and showed limited generalizability, particularly for rare categories. Conclusion: LLM-based NLP most effectively extracted fluoropyrimidine treatment and toxicity information from clinical notes, and has strong potential to support oncology research and pharmacovigilance.

When turned on, "GitHub Copilot checks code completion suggestions with their surrounding

Language models (LMs) can memorize and reproduce segments from their pretraining data verbatim even in non-adversarial settings, raising concerns about copyright, plagiarism, privacy, and creativity. We introduce Paraphrase Preference Optimization (ParaPO), a post-training method that fine-tunes LMs to reduce unintentional regurgitation while preserving their overall utility. ParaPO trains LMs to prefer paraphrased versions of memorized segments over the original verbatim content from the pretraining data. To maintain the ability to recall famous quotations when appropriate, we develop a variant of ParaPO that uses system prompts to control regurgitation behavior. In our evaluation on Llama3.1-8B, ParaPO consistently reduces regurgitation across all tested datasets (e.g., reducing the regurgitation metric from 17.3 to 12.9 in creative writing), whereas unlearning methods used in prior work to mitigate regurgitation are less effective outside their targeted unlearned domain (from 17.3 to 16.9). When applied to the instruction-tuned Tulu3-8B model, ParaPO with system prompting successfully preserves famous quotation recall while reducing unintentional regurgitation (from 8.7 to 6.3 in creative writing) when prompted not to regurgitate. In contrast, without ParaPO tuning, prompting the model not to regurgitate produces only a marginal reduction (8.7 to 8.4).

Mitral regurgitation is one of the most prevalent cardiac disorders. Four-dimensional (4D) ultrasound has emerged as the primary imaging modality for assessing dynamic valvular morphology. However, 4D mitral valve (MV) analysis remains challenging due to limited phase annotations, severe motion artifacts, and poor imaging quality. Yet, the absence of inter-phase dependency in existing methods hinders 4D MV analysis. To bridge this gap, we propose a Motion-Topology guided consistency network (MTCNet) for accurate 4D MV ultrasound segmentation in semi-supervised learning (SSL). MTCNet requires only sparse end-diastolic and end-systolic annotations. First, we design a cross-phase motion-guided consistency learning strategy, utilizing a bi-directional attention memory bank to propagate spatio-temporal features. This enables MTCNet to achieve excellent performance both per- and inter-phase. Second, we devise a novel topology-guided correlation regularization that explores physical prior knowledge to maintain anatomically plausible. Therefore, MTCNet can effectively leverage structural correspondence between labeled and unlabeled phases. Extensive evaluations on the first largest 4D MV dataset, with 1408 phases from 160 patients, show that MTCNet performs superior cross-phase consistency compared to other advanced methods (Dice: 87.30%, HD: 1.75mm). Both the code and the dataset are available at https://github.com/crs524/MTCNet.

Cardiac auscultation, an integral tool in diagnosing cardiovascular diseases (CVDs), often relies on the subjective interpretation of clinicians, presenting a limitation in consistency and accuracy. Addressing this, we introduce the BUET Multi-disease Heart Sound (BMD-HS) dataset - a comprehensive and meticulously curated collection of heart sound recordings. This dataset, encompassing 864 recordings across five distinct classes of common heart sounds, represents a broad spectrum of valvular heart diseases, with a focus on diagnostically challenging cases. The standout feature of the BMD-HS dataset is its innovative multi-label annotation system, which captures a diverse range of diseases and unique disease states. This system significantly enhances the dataset's utility for developing advanced machine learning models in automated heart sound classification and diagnosis. By bridging the gap between traditional auscultation practices and contemporary data-driven diagnostic methods, the BMD-HS dataset is poised to revolutionize CVD diagnosis and management, providing an invaluable resource for the advancement of cardiac health research. The dataset is publicly available at this link: https://github.com/mHealthBuet/BMD-HS-Dataset.

Language models (LMs) derive their capabilities from extensive training on diverse data, including potentially copyrighted material. These models can memorize and generate content similar to their training data, posing potential concerns. Therefore, model creators are motivated to develop mitigation methods that prevent generating protected content. We term this procedure as copyright takedowns for LMs, noting the conceptual similarity to (but legal distinction from) the DMCA takedown This paper introduces the first evaluation of the feasibility and side effects of copyright takedowns for LMs. We propose CoTaEval, an evaluation framework to assess the effectiveness of copyright takedown methods, the impact on the model's ability to retain uncopyrightable factual knowledge from the training data whose recitation is embargoed, and how well the model maintains its general utility and efficiency. We examine several strategies, including adding system prompts, decoding-time filtering interventions, and unlearning approaches. Our findings indicate that no tested method excels across all metrics, showing significant room for research in this unique problem setting and indicating potential unresolved challenges for live policy proposals.

The objective of this work is to optimize the performance of a constant flow parallel mechanical displacement micropump, which has parallel pump chambers and incorporates passive check valves. The critical task is to minimize the pressure pulse caused by regurgitation, which negatively impacts the constant flow rate, during the reciprocating motion when the left and right pumps interchange their role of aspiration and transfusion. Previous works attempt to solve this issue via the mechanical design of passive check valves. In this work, the novel concept of overlap time is proposed, and the issue is solved from the aspect of control theory by implementing a RBF neural network trained by both unsupervised and supervised learning. The experimental results indicate that the pressure pulse is optimized in the range of 0.15 - 0.25 MPa, which is a significant improvement compared to the maximum pump working pressure of 40 MPa.

AI technologies like ChatGPT are necessitating a fundamental overhaul of our educational systems and institutions. Getting the right answers to predetermined tests is no longer sufficient in an age where AI can access, integrate, and recite knowledge billions if not trillions of times faster than the human mind. So, what are the skills, capabilities, and experiences that our students and citizens will need to prosper in an age where personal and professional success will be based on the application, not the memorization and regurgitation, of knowledge? Let's continue that conversation here in Part II to define the requirements for humans to excel in creating organizational and societal value in a world dominated by AI and Big Data. Many organizations engage in a "wear'em down" decision-making process when dealing with wicked hard challenges with multiple opposing views.