Knowing which training examples drive outputs is fundamental to auditing, correcting, and understanding language models, yet for modern LLMs this remains expensive, approximate, and largely post-hoc. Standard language models generate tokens through a dense network pathway, causing training data's influence to be distributed across parameters rather than organized along explicit, traceable components. We introduce a prototype language model architecture, Prototypes for Interpretable Sequence Modeling (PRISM), that forms each prediction via a sparse, non-negative mixture of learned prototypes, trained with clustering objectives that anchor each prototype to coherent neighborhoods of training examples. Across architectures from 130M to 1.6B parameters trained on up to 50B tokens, prototype language models either surpass or remain within 2.5 percentage points on average downstream accuracy of matched dense baselines. We show that sparse prototype structure localizes curvature in the loss landscape, yielding a more tractable Hessian and enabling training data attribution that is ~500x faster than post hoc baselines when consuming equivalent memory. Calibrating linear prototype controllers can improve downstream accuracy by roughly 3 points while tracing those corrections back to training neighborhoods, and targeted prototype suppression can remove model behaviors without finetuning or measurable loss in generation quality.

Masked Graph Autoencoders (MGAEs) have gained significant attention recently. Their proxy tasks typically involve random corruption of input graphs followed by reconstruction. However, in the molecular domain, two main issues arise: the predetermined mask ratio and reconstruction objectives can lead to suboptimal performance or negative transfer due to overly simplified or complex tasks, and these tasks may deviate from chemical priors. To tackle these challenges, we propose Dynamic and Chemical Constraints (DyCC) for MGAEs. This includes a masking strategy called GIBMS, which preserves essential semantic information during graph masking while adaptively adjusting the mask ratio and content for each molecule. Additionally, we introduce a Soft Label Generator (SLG) that reconstructs masked tokens as learnable prototypes (soft labels) rather than hard labels. These components adhere to chemical constraints and allow dynamic variation of proxy tasks during training. We integrate the model-agnostic DyCC into various MGAEs and conduct comprehensive experiments, demonstrating significant performance improvements. Our code is available at https://github.

Graph few-shot learning has attracted increasing attention due to its ability to rapidly adapt models to new tasks with only limited labeled nodes. Despite the remarkable progress made by existing graph few-shot learning methods, several key limitations remain. First, most current approaches rely on predefined and unified graph filters (e.g., low-pass or high-pass filters) to globally enhance or suppress node frequency signals. Such fixed spectral operations fail to account for the heterogeneity of local topological structures inherent in real-world graphs. Moreover, these methods often assume that the support and query sets are drawn from the same distribution. However, under few-shot conditions, the limited labeled data in the support set may not sufficiently capture the complex distribution of the query set, leading to suboptimal generalization.

Label prototype learning has emerged as an effective paradigm in Partial MultiLabel Learning (PML), providing a distinctive framework for modeling structured representations of label semantics while naturally filtering noise through prototypebased label confidence estimation. However, existing prototype-based methods face a critical limitation: class prototypes are the biased estimates due to noisy candidate labels, particularly when positive samples are scarce. To this end, we first propose a mutually class prototype alignment strategy bypassing noise interference by introducing two different transformation matrices, which makes the class prototypes learned by the fuzzy clustering and candidate label set mutually alignment for correcting themselves. Such alignment is also passed on to the fuzzy memberships label in turn. In addition, to eliminate noise interference in the candidate label set during the classifier learning, we use the learned permutation matrix to transform the fuzzy memberships label for learning a label reliability indicator matrix accompanied by the candidate label set. This makes the label reliability indicator matrix absolutely prevent the occurrence of numerical values located in non-label and simultaneously eliminate the introduction of incorrect label as much as possible.

Point cloud completion, aiming to reconstruct missing part from incomplete point clouds, is a pivotal task in 3D computer vision. Traditional supervised approaches often necessitate complete point clouds for training supervision, which are not readily accessible in real-world applications. Recent studies have attempted to mitigate this dependency by employing self-supervise mechanisms. However, these approaches frequently yield suboptimal results due to the absence of complete structure in the point cloud data during training. To address these issues, in this paper, we propose an effective framework to complete the point cloud under the guidance of self learned complete structure. A key contribution of our work is the development of a novel self-supervised complete structure reconstruction module, which can learn the complete structure explicitly from incomplete point clouds and thus eliminate the reliance on training data from complete point clouds. Additionally, we introduce a contrastive learning approach at both the clusterand instance-level to extract shape features guided by the complete structure and to capture style features, respectively. This dual-level learning design ensures that the generated point clouds are both shape-completed and detail-preserving. Extensive experiments on both synthetic and real-world datasets demonstrate that our approach significantly outperforms state-of-the-art self-supervised methods.

Neurosymbolic AI is growing in popularity thanks to its ability to combine neural perception and symbolic reasoning in end-to-end trainable models. However, recent findings reveal these are prone to shortcut reasoning, i.e., to learning unindented concepts-or neural predicates-which exploit spurious correlations to satisfy the symbolic constraints. In this paper, we address reasoning shortcuts at their root cause and we introduce Prototypical Neurosymbolic architectures. These models are able to satisfy the symbolic constraints (be right) because they have learnt the correct basic concepts (for the right reasons) and not because of spurious correlations, even in extremely low data regimes. Leveraging the theory of prototypical learning, we demonstrate that we can effectively avoid reasoning shortcuts by training the models to satisfy the background knowledge while taking into account the similarity of the input with respect to the handful of labelled datapoints. We extensively validate our approach on the recently proposed rsbenchbenchmark suite in a variety of settings and tasks with very scarce supervision: we show significant improvements in learning the right concepts both in synthetic tasks (MNIST-EvenOdd and Kand-Logic) and real-world, high-stake ones (BDD-OIA). Our findings pave the way to prototype grounding as an effective, annotation-efficient strategy for safe and reliable neurosymbolic learning.

Vision-Language Models (VLMs) excel at zero-shot inference but often degrade under test-time domain shifts. For this reason, episodic test-time adaptation strategies have recently emerged as powerful techniques for adapting VLMs to a single unlabeled image. However, existing adaptation strategies, such as test-time prompt tuning, typically require backpropagating through large encoder weights or altering core model components. In this work, we introduce Spectrum-Aware Test-Time Steering (STS), a lightweight adaptation framework that extracts a spectral subspace from the textual embeddings to define principal semantic directions and learns to steer latent representations in a spectrum-aware manner by adapting a small number of per-sample shift parameters to minimize entropy across augmented views. STS operates entirely at inference in the latent space, without backpropagation through or modification of the frozen encoders. Building on standard evaluation protocols, our comprehensive experiments demonstrate that STS largely surpasses or compares favorably against state-of-the-art test-time adaptation methods, while introducing only a handful of additional parameters and achieving inference speeds up to 8 faster with a 12 smaller memory footprint than conventional test-time prompt tuning. The code is available at https://github.com/kdafnis/STS.

Spatio-temporal forecasting is essential for real-world applications such as traffic management and urban computing. Although recent methods have shown improved accuracy, they often fail to account for dynamic deviations between current inputs and historical patterns. These deviations contain critical signals that can significantly affect model performance. To fill this gap, we propose STSSDL, a Spatio-Temporal time series forecasting framework that incorporates a Self-Supervised Deviation Learning scheme to capture and utilize such deviations. ST-SSDL anchors each input to its historical average and discretizes the latent space using learnable prototypes that represent typical spatio-temporal patterns. Two auxiliary objectives are proposed to refine this structure: a contrastive loss that enhances inter-prototype discriminability and a deviation loss that regularizes the distance consistency between input representations and corresponding prototypes to quantify deviation. Optimized jointly with the forecasting objective, these components guide the model to organize its hidden space and improve generalization across diverse input conditions. Experiments on six benchmark datasets show that ST-SSDL consistently outperforms state-of-the-art baselines across multiple metrics. Visualizations further demonstrate its ability to adaptively respond to varying levels of deviation in complex spatio-temporal scenarios.

Prohibited item detection based on X-ray images is one of the most effective security inspection methods. However, the foreground-background feature coupling caused by the overlapping phenomenon specific to X-ray images makes general detectors designed for natural images perform poorly. To address this issue, we propose a Category Semantic Prior Contrastive Learning (CSPCL) mechanism, which aligns the class prototypes perceived by the classifier with the content queries to correct and supplement the missing semantic information responsible for classification, thereby enhancing the model sensitivity to foreground features. To achieve this alignment, we design a specific contrastive loss, CSP loss, which comprises the Intra-Class Truncated Attraction (ITA) loss and the Inter-Class Adaptive Repulsion (IAR) loss, and outperforms classic contrastive losses. Specifically, the ITA loss leverages class prototypes to attract intra-class content queries and preserves essential intra-class diversity via a gradient truncation function. The IAR loss employs class prototypes to adaptively repel inter-class content queries, with the repulsion strength scaled by prototype-prototype similarity, thereby improving inter-class discriminability, especially among similar categories. CSPCL is general and can be easily integrated into Deformable DETR-based models. Extensive experiments on the PIXray, OPIXray, PIDray, and CLCXray datasets demonstrate that CSPCL significantly enhances the performance of various state-of-the-art models without increasing inference complexity.

Time series analysis provides essential insights for real-world system dynamics and informs downstream decision-making, yet most existing methods often overlook the rich contextual signals present in auxiliary modalities. To bridge this gap, we introduce TimeXL, a multi-modal prediction framework that integrates a prototypebased time series encoder with three collaborating Large Language Models (LLMs) to deliver more accurate predictions and interpretable explanations. First, a multimodal prototype-based encoder processes both time series and textual inputs to generate preliminary forecasts alongside case-based rationales. These outputs then feed into a prediction LLM, which refines the forecasts by reasoning over the encoder's predictions and explanations. Next, a reflection LLM compares the predicted values against the ground truth, identifying textual inconsistencies or noise. Guided by this feedback, a refinement LLM iteratively enhances text quality and triggers encoder retraining. This closed-loop workflow--prediction, critique (reflect), and refinement--continuously boosts the framework's performance and interpretability. Empirical evaluations on four real-world datasets demonstrate that TimeXL achieves up to 8.9% improvement in AUC and produces human-centric, multi-modal explanations, highlighting the power of LLM-driven reasoning for time series prediction.