merge
Hierarchical topological clustering
Topological methods have the potential of exploring data clouds without making assumptions on their the structure. Here we propose a hierarchical topological clustering algorithm that can be implemented with any distance choice. The persistence of outliers and clusters of arbitrary shape is inferred from the resulting hierarchy. We demonstrate the potential of the algorithm on selected datasets in which outliers play relevant roles, consisting of images, medical and economic data. These methods can provide meaningful clusters in situations in which other techniques fail to do so.
Subquadratic High-Dimensional Hierarchical Clustering
We consider the widely-used average-linkage, single-linkage, and Ward's methods for computing hierarchical clusterings of high-dimensional Euclidean inputs. It is easy to show that there is no efficient implementation of these algorithms in high dimensional Euclidean space since it implicitly requires to solve the closest pair problem, a notoriously difficult problem. However, how fast can these algorithms be implemented if we allow approximation? More precisely: these algorithms successively merge the clusters that are at closest average (for average-linkage), minimum distance (for single-linkage), or inducing the least sum-of-square error (for Ward's). We ask whether one could obtain a significant running-time improvement if the algorithm can merge $\gamma$-approximate closest clusters (namely, clusters that are at distance (average, minimum, or sum-of-square error) at most $\gamma$ times the distance of the closest clusters). We show that one can indeed take advantage of the relaxation and compute the approximate hierarchical clustering tree using $\widetilde{O}(n)$ $\gamma$-approximate nearest neighbor queries.
Grow and Merge: A Unified Framework for Continuous Categories Discovery
Although a number of studies are devoted to novel category discovery, most of them assume a static setting where both labeled and unlabeled data are given at once for finding new categories. In this work, we focus on the application scenarios where unlabeled data are continuously fed into the category discovery system. We refer to it as the {\bf Continuous Category Discovery} ({\bf CCD}) problem, which is significantly more challenging than the static setting. A common challenge faced by novel category discovery is that different sets of features are needed for classification and category discovery: class discriminative features are preferred for classification, while rich and diverse features are more suitable for new category mining. This challenge becomes more severe for dynamic setting as the system is asked to deliver good performance for known classes over time, and at the same time continuously discover new classes from unlabeled data. To address this challenge, we develop a framework of {\bf Grow and Merge} ({\bf GM}) that works by alternating between a growing phase and a merge phase: in the growing phase, it increases the diversity of features through a continuous self-supervised learning for effective category mining, and in the merging phase, it merges the grown model with a static one to ensure satisfying performance for known classes. Our extensive studies verify that the proposed GM framework is significantly more effective than the state-of-the-art approaches for continuous category discovery.
Hierarchical Clustering With Confidence
Wu, Di, Bien, Jacob, Panigrahi, Snigdha
Agglomerative hierarchical clustering is one of the most widely used approaches for exploring how observations in a dataset relate to each other. However, its greedy nature makes it highly sensitive to small perturbations in the data, often producing different clustering results and making it difficult to separate genuine structure from spurious patterns. In this paper, we show how randomizing hierarchical clustering can be useful not just for measuring stability but also for designing valid hypothesis testing procedures based on the clustering results. We propose a simple randomization scheme together with a method for constructing a valid p-value at each node of the hierarchical clustering dendrogram that quantifies evidence against performing the greedy merge. Our test controls the Type I error rate, works with any hierarchical linkage without case-specific derivations, and simulations show it is substantially more powerful than existing selective inference approaches. To demonstrate the practical utility of our p-values, we develop an adaptive $α$-spending procedure that estimates the number of clusters, with a probabilistic guarantee on overestimation. Experiments on simulated and real data show that this estimate yields powerful clustering and can be used, for example, to assess clustering stability across multiple runs of the randomized algorithm.
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Hypernetwork Theory: The Structural Kernel
Modelling across engineering, systems science, and formal methods remains limited by binary relations, implicit semantics, and diagram-centred notations that obscure multilevel structure and hinder mechanisation. Hypernetwork Theory (HT) addresses these gaps by treating the n-ary relation as the primary modelling construct. Each relation is realised as a typed hypersimplex - alpha (conjunctive, part-whole) or beta (disjunctive, taxonomic) - bound to a relation symbol R that fixes arity and ordered roles. Semantics are embedded directly in the construct, enabling hypernetworks to represent hierarchical and heterarchical systems without reconstruction or tool-specific interpretation. This paper presents the structural kernel of HT. It motivates typed n-ary relational modelling, formalises the notation and axioms (A1-A5) for vertices, simplices, hypersimplices, boundaries, and ordering, and develops a complete algebra of structural composition. Five operators - merge, meet, difference, prune, and split - are defined by deterministic conditions and decision tables that ensure semantics-preserving behaviour and reconcile the Open World Assumption with closure under rules. Their deterministic algorithms show that HT supports reproducible and mechanisable model construction, comparison, decomposition, and restructuring. The resulting framework elevates hypernetworks from symbolic collections to structured, executable system models, providing a rigorous and extensible foundation for mechanisable multilevel modelling.
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Teaching Old Tokenizers New Words: Efficient Tokenizer Adaptation for Pre-trained Models
Purason, Taido, Chizhov, Pavel, Yamshchikov, Ivan P., Fishel, Mark
Tokenizer adaptation plays an important role in transferring pre-trained language models to new domains or languages. In this work, we address two complementary aspects of this process: vocabulary extension and pruning. The common approach to extension trains a new tokenizer on domain-specific text and appends the tokens that do not overlap with the existing vocabulary, which often results in many tokens that are unreachable or never used. We propose continued BPE training, which adapts a pre-trained tokenizer by continuing the BPE merge learning process on new data. Experiments across multiple languages and model families show that this approach improves tokenization efficiency and leads to better utilization of added vocabulary. We also introduce leaf-based vocabulary pruning, which removes redundant tokens while preserving model quality. Together, these methods provide practical tools for controlled vocabulary modification, which we release as an open-source package.
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ToMA: Token Merge with Attention for Diffusion Models
Lu, Wenbo, Zheng, Shaoyi, Xia, Yuxuan, Wang, Shengjie
Diffusion models excel in high-fidelity image generation but face scalability limits due to transformers' quadratic attention complexity. Plug-and-play token reduction methods like ToMeSD and ToFu reduce FLOPs by merging redundant tokens in generated images but rely on GPU-inefficient operations (e.g., sorting, scattered writes), introducing overheads that negate theoretical speedups when paired with optimized attention implementations (e.g., FlashAttention). To bridge this gap, we propose Token Merge with Attention (ToMA), an off-the-shelf method that redesigns token reduction for GPU-aligned efficiency, with three key contributions: 1) a reformulation of token merge as a submodular optimization problem to select diverse tokens; 2) merge/unmerge as an attention-like linear transformation via GPU-friendly matrix operations; and 3) exploiting latent locality and sequential redundancy (pattern reuse) to minimize overhead. ToMA reduces SDXL/Flux generation latency by 24%/23%, respectively (with DINO $Δ< 0.07$), outperforming prior methods. This work bridges the gap between theoretical and practical efficiency for transformers in diffusion. Code available at https://github.com/WenboLuu/ToMA.
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Extension Condition "violations" and Merge optimality constraints
Marcolli, Matilde, Larson, Richard, Huijbregts, Riny
We analyze, using the mathematical formulation of Merge within the Strong Minimalist Thesis framework, a set of linguistic phenomena, including head-to-head movement, phrasal affixes and syntactic cliticization, verb-particle alternation, and operator-variable phenomena. These are often regarded as problematic, as violations of the Extension Condition. We show that, in fact, all of these phenomena can be explained without involving any EC violation. We first show that derivations using Sideward Merge are possible for all of these cases: these respect EC, though they involve some amount of optimality violations, with respect to Resource Restrictions cost functions, and the amount of violation differs among these cases. We show that all the cases that involve large optimality violations can be derived in alternative ways involving neither EC nor the use of SM. The main remaining case (head-to-head movement) only involves SM with minimal violations of optimality (near equilibrium fluctuations). We analyze explicitly also the cases of multiple wh-fronting, clusters of clitics in Romance languages and possessor agreement construction in Korean, and how an explanation of these phenomena based on SM can be made compatible with the colored operad generators for phases and theta roles. We also show that the EC condition has a clear algebraic meaning in the mathematical formulation of Merge and is therefore an intrinsic structural algebraic constraint of the model, rather than an additional assumption. We also show that the minimal optimality violating SM plays a structural role in the Markovian properties of Merge, and we compare different optimality conditions coming from Minimal Search and from Resource Restriction in terms of their effect on the dynamics of the Hopf algebra Markov chain, in a simple explicit example.
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Knowledge Completes the Vision: A Multimodal Entity-aware Retrieval-Augmented Generation Framework for News Image Captioning
You, Xiaoxing, Huang, Qiang, Li, Lingyu, Zhang, Chi, Liu, Xiaopeng, Zhang, Min, Yu, Jun
News image captioning aims to produce journalistically informative descriptions by combining visual content with contextual cues from associated articles. Despite recent advances, existing methods struggle with three key challenges: (1) incomplete information coverage, (2) weak cross-modal alignment, and (3) suboptimal visual-entity grounding. To address these issues, we introduce MERGE, the first Multimodal Entity-aware Retrieval-augmented GEneration framework for news image captioning. MERGE constructs an entity-centric multimodal knowledge base (EMKB) that integrates textual, visual, and structured knowledge, enabling enriched background retrieval. It improves cross-modal alignment through a multistage hypothesis-caption strategy and enhances visual-entity matching via dynamic retrieval guided by image content. Extensive experiments on GoodNews and NYTimes800k show that MERGE significantly outperforms state-of-the-art baselines, with CIDEr gains of +6.84 and +1.16 in caption quality, and F1-score improvements of +4.14 and +2.64 in named entity recognition. Notably, MERGE also generalizes well to the unseen Visual News dataset, achieving +20.17 in CIDEr and +6.22 in F1-score, demonstrating strong robustness and domain adaptability.
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