Geological carbon sequestration (GCS) involves injecting CO$_2$ into subsurface geological formations for permanent storage. Numerical simulations could guide decisions in GCS projects by predicting CO$_2$ migration pathways and the pressure distribution in storage formation. However, these simulations are often computationally expensive due to highly coupled physics and large spatial-temporal simulation domains. Surrogate modeling with data-driven machine learning has become a promising alternative to accelerate physics-based simulations. Among these, the Fourier neural operator (FNO) has been applied to three-dimensional synthetic subsurface models. Here, to further improve performance, we have developed a nested Fourier-DeepONet by combining the expressiveness of the FNO with the modularity of a deep operator network (DeepONet). This new framework is twice as efficient as a nested FNO for training and has at least 80% lower GPU memory requirement due to its flexibility to treat temporal coordinates separately. These performance improvements are achieved without compromising prediction accuracy. In addition, the generalization and extrapolation ability of nested Fourier-DeepONet beyond the training range has been thoroughly evaluated. Nested Fourier-DeepONet outperformed the nested FNO for extrapolation in time with more than 50% reduced error. It also exhibited good extrapolation accuracy beyond the training range in terms of reservoir properties, number of wells, and injection rate.

Data-driven FWI has been increasingly studied with various neural network architectures to improve accuracy and computational efficiency. Nevertheless, the applicability of pre-trained neural networks is severely restricted by potential discrepancies between the source function used in the field survey and the one utilized during training. Here, we develop a Fourier-enhanced deep operator network (Fourier-DeepONet) for FWI with the generalization of seismic sources, including the frequencies and locations of sources. Specifically, we employ the Fourier neural operator as the decoder of DeepONet, and we utilize source parameters as one input of Fourier-DeepONet, facilitating the resolution of FWI with variable sources. To test Fourier-DeepONet, we develop three new and realistic FWI benchmark datasets (FWI-F, FWI-L, and FWI-FL) with varying source frequencies, locations, or both. Our experiments demonstrate that compared with existing data-driven FWI methods, Fourier-DeepONet obtains more accurate predictions of subsurface structures in a wide range of source parameters. Moreover, the proposed Fourier-DeepONet exhibits superior robustness when handling data with Gaussian noise or missing traces and sources with Gaussian noise, paving the way for more reliable and accurate subsurface imaging across diverse real conditions.