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The BEAT-CF Causal Model: A model for guiding the design of trials and observational analyses of cystic fibrosis exacerbations

Mascaro, Steven, Woodberry, Owen, McLeod, Charlie, Messer, Mitch, Selvadurai, Hiran, Wu, Yue, Schultz, Andre, Snelling, Thomas L

arXiv.org Artificial Intelligence

Loss of lung function in cystic fibrosis (CF) occurs progressively, punctuated by acute pulmonary exacerbations (PEx) in which abrupt declines in lung function are not fully recovered. A key component of CF management over the past half century has been the treatment of PEx to slow lung function decline. This has been credited with improvements in survival for people with CF (PwCF), but there is no consensus on the optimal approach to PEx management. BEAT-CF (Bayesian evidence-adaptive treatment of CF) was established to build an evidence-informed knowledge base for CF management. The BEAT-CF causal model is a directed acyclic graph (DAG) and Bayesian network (BN) for PEx that aims to inform the design and analysis of clinical trials comparing the effectiveness of alternative approaches to PEx management. The causal model describes relationships between background risk factors, treatments, and pathogen colonisation of the airways that affect the outcome of an individual PEx episode. The key factors, outcomes, and causal relationships were elicited from CF clinical experts and together represent current expert understanding of the pathophysiology of a PEx episode, guiding the design of data collection and studies and enabling causal inference. Here, we present the DAG that documents this understanding, along with the processes used in its development, providing transparency around our trial design and study processes, as well as a reusable framework for others.


AI for pRedicting Exacerbations in KIDs with aSthma (AIRE-KIDS)

Ooi, Hui-Lee, Mitsakakis, Nicholas, Dastarac, Margerie Huet, Zemek, Roger, Plint, Amy C., Gilchrist, Jeff, Emam, Khaled El, Radhakrishnan, Dhenuka

arXiv.org Artificial Intelligence

Recurrent exacerbations remain a common yet preventable outcome for many children with asthma. Machine learning (ML) algorithms using electronic medical records (EMR) could allow accurate identification of children at risk for exacerbations and facilitate referral for preventative comprehensive care to avoid this morbidity. We developed ML algorithms to predict repeat severe exacerbations (i.e. asthma-related emergency department (ED) visits or future hospital admissions) for children with a prior asthma ED visit at a tertiary care children's hospital. Retrospective pre-COVID19 (Feb 2017 - Feb 2019, N=2716) Epic EMR data from the Children's Hospital of Eastern Ontario (CHEO) linked with environmental pollutant exposure and neighbourhood marginalization information was used to train various ML models. We used boosted trees (LGBM, XGB) and 3 open-source large language model (LLM) approaches (DistilGPT2, Llama 3.2 1B and Llama-8b-UltraMedical). Models were tuned and calibrated then validated in a second retrospective post-COVID19 dataset (Jul 2022 - Apr 2023, N=1237) from CHEO. Models were compared using the area under the curve (AUC) and F1 scores, with SHAP values used to determine the most predictive features. The LGBM ML model performed best with the most predictive features in the final AIRE-KIDS_ED model including prior asthma ED visit, the Canadian triage acuity scale, medical complexity, food allergy, prior ED visits for non-asthma respiratory diagnoses, and age for an AUC of 0.712, and F1 score of 0.51. This is a nontrivial improvement over the current decision rule which has F1=0.334. While the most predictive features in the AIRE-KIDS_HOSP model included medical complexity, prior asthma ED visit, average wait time in the ED, the pediatric respiratory assessment measure score at triage and food allergy.


Detecting COPD Through Speech Analysis: A Dataset of Danish Speech and Machine Learning Approach

Sankey-Olsen, Cuno, Olesen, Rasmus Hvass, Eberhard, Tobias Oliver, Triantafyllopoulos, Andreas, Schuller, Björn, Aslan, Ilhan

arXiv.org Artificial Intelligence

Chronic Obstructive Pulmonary Disease (COPD) is a serious and debilitating disease affecting millions around the world. Its early detection using non-invasive means could enable preventive interventions that improve quality of life and patient outcomes, with speech recently shown to be a valuable biomarker. Yet, its validity across different linguistic groups remains to be seen. To that end, audio data were collected from 96 Danish participants conducting three speech tasks (reading, coughing, sustained vowels). Half of the participants were diagnosed with different levels of COPD and the other half formed a healthy control group. Subsequently, we investigated different baseline models using openSMILE features and learnt x-vector embeddings. We obtained a best accuracy of 67% using openSMILE features and logistic regression. Our findings support the potential of speech-based analysis as a non-invasive, remote, and scalable screening tool as part of future COPD healthcare solutions.


Severity Classification of Chronic Obstructive Pulmonary Disease in Intensive Care Units: A Semi-Supervised Approach Using MIMIC-III Dataset

Shojaei, Akram, Delrobaei, Mehdi

arXiv.org Artificial Intelligence

Chronic obstructive pulmonary disease (COPD) is a major global health concern, with accurate severity assessment crucial for effective management, especially in intensive care units (ICUs). This study presents a novel approach to COPD sever - ity classification using machine learning algorithms applied to the MIMIC - III dataset. Our work presents a new application of the MIMIC - III dataset and con - tributes to the growing field of artificial intelligence in critical care medicine. We developed a model to classify COPD severity based on available ICU parameters, including blood gas measurements and vital signs. Our methodology incorpo - rated semi - supervised learning techniques to leverage unlabeled data, enhancing model robustness. A random forest classifier demonstrated superior performance, achieving 92.51% accuracy and 0.98 ROC AUC distinguishing between mild - to - moderate and severe COPD cases. This approach offers a practical, accurate, and accessible tool for rapid COPD severity assessment in ICU settings, poten - tially improving clinical decision - making and patient outcomes. Future research should focus on external validation and integration into clinical decision support systems to enhance COPD management in the ICUs.


SoK: What Makes Private Learning Unfair?

Yao, Kai, Juarez, Marc

arXiv.org Artificial Intelligence

Differential privacy has emerged as the most studied framework for privacy-preserving machine learning. However, recent studies show that enforcing differential privacy guarantees can not only significantly degrade the utility of the model, but also amplify existing disparities in its predictive performance across demographic groups. Although there is extensive research on the identification of factors that contribute to this phenomenon, we still lack a complete understanding of the mechanisms through which differential privacy exacerbates disparities. The literature on this problem is muddled by varying definitions of fairness, differential privacy mechanisms, and inconsistent experimental settings, often leading to seemingly contradictory results. This survey provides the first comprehensive overview of the factors that contribute to the disparate effect of training models with differential privacy guarantees. We discuss their impact and analyze their causal role in such a disparate effect. Our analysis is guided by a taxonomy that categorizes these factors by their position within the machine learning pipeline, allowing us to draw conclusions about their interaction and the feasibility of potential mitigation strategies. We find that factors related to the training dataset and the underlying distribution play a decisive role in the occurrence of disparate impact, highlighting the need for research on these factors to address the issue.


Prediction of COPD Using Machine Learning, Clinical Summary Notes, and Vital Signs

Orangi-Fard, Negar

arXiv.org Artificial Intelligence

Chronic obstructive pulmonary disease (COPD) is a chronic inflammatory lung disease that causes obstructed airflow from the lungs. In the United States, more than 15.7 million Americans have been diagnosed with COPD, with 96% of individuals living with at least one other chronic health condition. It is the 4th leading cause of death in the country. Over 2.2 million patients are admitted to hospitals annually due to COPD exacerbations. Monitoring and predicting patient exacerbations on-time could save their life. This paper presents two different predictive models to predict COPD exacerbation using AI and natural language processing (NLP) approaches. These models use respiration summary notes, symptoms, and vital signs. To train and test these models, data records containing physiologic signals and vital signs time series were used. These records were captured from patient monitors and comprehensive clinical data obtained from hospital medical information systems for tens of thousands of Intensive Care Unit (ICU) patients. We achieved an area under the Receiver operating characteristic (ROC) curve of 0.82 in detection and prediction of COPD exacerbation.


Listening to asthma and COPD: An AI-powered wearable could monitor respiratory health

#artificialintelligence

A neck patch that monitors respiratory sounds may help manage asthma and chronic obstructive pulmonary disease (COPD) by detecting symptom flareups in real time, without compromising patient privacy. Asthma and COPD are two of the most common chronic respiratory diseases. In Europe, the combined prevalence is about 10 percent of the general population. In Canada, an estimated 3.8 million people experience asthma and two million people experience COPD. The chronic nature of asthma and COPD requires continuous disease monitoring and management.


AI-Assisted Cough Tracking Could Help Detect the Next Pandemic

#artificialintelligence

When Joe Brew worked for the Florida Department of Health as an epidemiologist for two years starting in 2013, he helped with syndromic surveillance, meaning he had the arduous job of reviewing the symptoms of patients coming into the emergency departments from all across the state. The goal of such work: to detect an abnormal spike of symptoms in an area that may indicate there's a public health concern. Public health authorities worldwide continue to use this type of surveillance. The outbreak of a novel pathogen in Wuhan, China in late 2019, for instance, was in part detected by a large uptick of patients coming to the hospital with symptoms of a respiratory infection, with unknown etiology. But Brew says this system fails to prevent the transmission of a virus like SARS-CoV-2 because by the time patients arrive at the hospital, they have likely already been infectious for a matter of days.


Deep Learning Models to Predict Pediatric Asthma Emergency Department Visits

Wang, Xiao, Wang, Zhijie, Pengetnze, Yolande M., Lachman, Barry S., Chowdhry, Vikas

arXiv.org Machine Learning

Pediatric asthma is the most prevalent chronic childhood illness, afflicting about 6.2 million children in the United States. However, asthma could be better managed by identifying and avoiding triggers, educating about medications and proper disease management strategies. This research utilizes deep learning methodologies to predict asthma-related emergency department (ED) visit within 3 months using Medicaid claims data. We compare prediction results against traditional statistical classification model - penalized Lasso logistic regression, which we trained and have deployed since 2015. The results have indicated that deep learning model Artificial Neural Networks (ANN) slightly outperforms (with AUC = 0.845) the Lasso logistic regression (with AUC = 0.842). The reason may come from the nonlinear nature of ANN.


Using the IoT and machine learning to track progression of lung disease

#artificialintelligence

IBM scientists Thomas Brunschwiler and Rahel Straessle are developing machine learning algorithms to interpret the IoT data. COPD, is a progressive lung disease which causes breathlessness and is often caused by cigarette smoke and air pollution. By 2030, it is expected to be the third leading cause of death worldwide, with 90% occurring in low and middle-income countries, according to the World Health Organization. The Centers for Disease Control and Prevention reports that by 2020 the expected cost of medical care for adults in the US with COPD will be more than $90 billion, mainly due to complications and multiple hospitalizations, many of which are preventable with better healthcare management and more personalized and frequent patient support. Management and prevention of COPD is the focus of a new research project presented today at the 19th annual IEEE Healthcom Conference, in Dalian, China.