Spectral clustering has gained popularity for clustering non-convex data due to its simplicity and effectiveness. It is essential to construct a similarity graph using a high-quality affinity measure that models the local neighborhood relations among the data samples. However, incomplete data can lead to inaccurate affinity measures, resulting in degraded clustering performance. To address these issues, we propose an imputation-free framework with two novel approaches to improve spectral clustering on incomplete data. Firstly, we introduce a new kernel correction method that enhances the quality of the kernel matrix estimated on incomplete data with a theoretical guarantee, benefiting classical spectral clustering on pre-defined kernels. Secondly, we develop a series of affinity learning methods that equip the selfexpressive framework with ℓp-norm to construct an intrinsic affinity matrix with an adaptive extension. Our methods outperform existing data imputation and distance calibration techniques on benchmark datasets, offering a promising solution to spectral clustering on incomplete data in various real-world applications.

Learning low-dimensional representations from multi-view relational data is challenging when underlying geometries differ across views. We propose Bary-GWMDS, a Gromov-Wasserstein-based method that operates directly on distance matrices to learn a consensus embedding preserving shared relational structure. By leveraging intrinsic distances, the approach naturally handles nonlinear distortions across views. We also introduce Mean-GWMDS-C, a clustering-oriented formulation that averages distance matrices and learns reduced-support representations via a consensus Gromov-Wasserstein transport. Experiments on synthetic and real-world datasets show that the proposed framework yields stable and geometrically meaningful embeddings.

This document supplements our main paper entitled Intrinsic Dimension, Persistent Homology and Generalization in Neural Networks as follows: (i) Sec. S1 firsts gives some of the formal definitions and interpretations omitted from the main paper due to space limitations. Next, it involves a discussion and contrasts our dimension estimator against the commonly used ones. Finally, it provides additional details into the regularizer we devised in the main paper; (ii) we then provide the complement the experimental evaluations given in the main paper and present additional studies on our synthetic diffusion data.

Multi-view data analysis seeks to integrate multiple representations of the same samples in order to recover a coherent low-dimensional structure. Classical approaches often rely on feature concatenation or explicit alignment assumptions, which become restrictive under heterogeneous geometries or nonlinear distortions. In this work, we propose two geometry-aware multi-view embedding strategies grounded in Gromov-Wasserstein (GW) optimal transport. The first, termed Mean-GWMDS, aggregates view-specific relational information by averaging distance matrices and applying GW-based multidimensional scaling to obtain a representative embedding. The second strategy, referred to as Multi-GWMDS, adopts a selection-based paradigm in which multiple geometry-consistent candidate embeddings are generated via GW-based alignment and a representative embedding is selected. Experiments on synthetic manifolds and real-world datasets show that the proposed methods effectively preserve intrinsic relational structure across views. These results highlight GW-based approaches as a flexible and principled framework for multi-view representation learning.

Understanding the distance between human languages is central to linguistics, anthropology, and tracing human evolutionary history. Yet, while linguistics has long provided rich qualitative accounts of cross-linguistic variation, a unified and scalable quantitative approach to measuring language distance remains lacking. In this paper, we introduce a method that leverages pretrained multilingual language models as systematic instruments for linguistic measurement. Specifically, we show that the spontaneously emerged attention mechanisms of these models provide a robust, tokenization-agnostic measure of cross-linguistic distance, termed Attention Transport Distance (ATD). By treating attention matrices as probability distributions and measuring their geometric divergence via optimal transport, we quantify the representational distance between languages during translation. Applying ATD to a large and diverse set of languages, we demonstrate that the resulting distances recover established linguistic groupings with high fidelity and reveal patterns aligned with geographic and contact-induced relationships. Furthermore, incorporating ATD as a regularizer improves transfer performance in low-resource machine translation. Our results establish a principled foundation for testing linguistic hypotheses using artificial neural networks. This framework transforms multilingual models into powerful tools for quantitative linguistic discovery, facilitating more equitable multilingual AI.

Such distance matrices are commonly computed in software packages and have applications to learning image manifolds, handwriting recognition, and multi-dimensional unfolding, among other things. In an attempt to reduce their description size, we study low rank approximation of such matrices. Our main result is to show that for any underlying distance metric $d$, it is possible to achieve an additive error low rank approximation in sublinear time. We note that it is provably impossible to achieve such a guarantee in sublinear time for arbitrary matrices $\AA$, and our proof exploits special properties of distance matrices. We develop a recursive algorithm based on additive projection-cost preserving sampling.

These techniques calibrate an initial non-metric distance matrix estimated on incomplete data to a distance metric.