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 biomedical engineering


Simulated zebrafish and a vision-equipped robotic fish reveal how the body shapes brain circuits

Robohub

When a fish holds its position against a current in a river, its brain must figure out how fast to swim and how to steer to offset the water flow. Most fish use vision to register the world sliding past, detect optic flow speed and direction, and their brains turn these signals into compensatory swimming. The retina captures signals of optic-flow direction, central pretectal neurons interpret direction, and spinal nerves drive muscle contractions. The catch is that one cannot easily change the living brain to test how these circuits work. Although advances in imaging now allow detailed recording, and even manipulation, of neurons alongside behavior, rewiring connections to ask what a particular link actually does remains almost impossible in the living, complex animal.



WildPPG: AReal-WorldPPGDatasetofLong ContinuousRecordings

Neural Information Processing Systems

Several external factors negativelyimpact accurate estimation, such as motion artifacts [5] that arise from a person's movements and performed activities [6,7], sensor misplacement [8] or slippage during wear, and environmental conditions that change over time such as low temperatures [9] or high levels of ambient light [10].


Robot-mediated physical Human-Human Interaction in Neurorehabilitation: a position paper

arXiv.org Artificial Intelligence

Neurorehabilitation conventionally relies on the interaction between a patient and a physical therapist. Robotic systems can improve and enrich the physical feedback provided to patients after neurological injury, but they under-utilize the adaptability and clinical expertise of trained therapists. In this position paper, we advocate for a novel approach that integrates the therapist's clinical expertise and nuanced decision-making with the strength, accuracy, and repeatability of robotics: Robot-mediated physical Human-Human Interaction. This framework, which enables two individuals to physically interact through robotic devices, has been studied across diverse research groups and has recently emerged as a promising link between conventional manual therapy and rehabilitation robotics, harmonizing the strengths of both approaches. This paper presents the rationale of a multidisciplinary team-including engineers, doctors, and physical therapists-for conducting research that utilizes: a unified taxonomy to describe robot-mediated rehabilitation, a framework of interaction based on social psychology, and a technological approach that makes robotic systems seamless facilitators of natural human-human interaction.


Informed Bootstrap Augmentation Improves EEG Decoding

arXiv.org Artificial Intelligence

Electroencephalography (EEG) offers detailed access to neural dynamics but remains constrained by noise and trial-by-trial variability, limiting decoding performance in data-restricted or complex paradigms. Data augmentation is often employed to enhance feature representations, yet conventional uniform averaging overlooks differences in trial informativeness and can degrade representational quality. We introduce a weighted bootstrapping approach that prioritizes more reliable trials to generate higher-quality augmented samples. In a Sentence Evaluation paradigm, weights were computed from relative ERP differences and applied during probabilistic sampling and averaging. Across conditions, weighted bootstrapping improved decoding accuracy relative to unweighted (from 68.35% to 71.25% at best), demonstrating that emphasizing reliable trials strengthens representational quality. The results demonstrate that reliability-based augmentation yields more robust and discriminative EEG representations. The code is publicly available at https://github.com/lyricists/NeuroBootstrap.


A flexible lens controlled by light-activated artificial muscles promises to let soft machines see

Robohub

Inspired by the human eye, our biomedical engineering lab at Georgia Tech has designed an adaptive lens made of soft, light-responsive, tissuelike materials. Adjustable camera systems usually require a set of bulky, moving, solid lenses and a pupil in front of a camera chip to adjust focus and intensity. In contrast, human eyes perform these same functions using soft, flexible tissues in a highly compact form. Our lens, called the photo-responsive hydrogel soft lens, or PHySL, replaces rigid components with soft polymers acting as artificial muscles. The polymers are composed of a hydrogel a water-based polymer material.




Data-Driven Bifurcation Handling in Physics-Based Reduced-Order Vascular Hemodynamic Models

arXiv.org Artificial Intelligence

Three-dimensional (3D) finite-element simulations of cardiovascular flows provide high-fidelity predictions to support cardiovascular medicine, but their high computational cost limits clinical practicality. Reduced-order models (ROMs) offer computationally efficient alternatives but suffer reduced accuracy, particularly at vessel bifurcations where complex flow physics are inadequately captured by standard Poiseuille flow assumptions. We present an enhanced numerical framework that integrates machine learning-predicted bifurcation coefficients into zero-dimensional (0D) hemodynamic ROMs to improve accuracy while maintaining computational efficiency. We develop a resistor-resistor-inductor (RRI) model that uses neural networks to predict pressure-flow relationships from bifurcation geometry, incorporating linear and quadratic resistances along with inductive effects. The method employs non-dimensionalization to reduce training data requirements and apriori flow split prediction for improved bifurcation characterization. We incorporate the RRI model into a 0D model using an optimization-based solution strategy. We validate the approach in isolated bifurcations and vascular trees, across Reynolds numbers from 0 to 5,500, defining ROM accuracy by comparison to 3D finite element simulation. Results demonstrate substantial accuracy improvements: averaged across all trees and Reynolds numbers, the RRI method reduces inlet pressure errors from 54 mmHg (45%) for standard 0D models to 25 mmHg (17%), while a simplified resistor-inductor (RI) variant achieves 31 mmHg (26%) error. The enhanced 0D models show particular effectiveness at high Reynolds numbers and in extensive vascular networks. This hybrid numerical approach enables accurate, real-time hemodynamic modeling for clinical decision support, uncertainty quantification, and digital twins in cardiovascular biomedical engineering.


Advancing Problem-Based Learning in Biomedical Engineering in the Era of Generative AI

arXiv.org Artificial Intelligence

Problem-Based Learning (PBL) has significantly impacted biomedical engineering (BME) education since its introduction in the early 2000s, effectively enhancing critical thinking and real-world knowledge application among students. With biomedical engineering rapidly converging with artificial intelligence (AI), integrating effective AI education into established curricula has become challenging yet increasingly necessary. Recent advancements, including AI's recognition by the 2024 Nobel Prize, have highlighted the importance of training students comprehensively in biomedical AI. However, effective biomedical AI education faces substantial obstacles, such as diverse student backgrounds, limited personalized mentoring, constrained computational resources, and difficulties in safely scaling hands-on practical experiments due to privacy and ethical concerns associated with biomedical data. To overcome these issues, we conducted a three-year (2021-2023) case study implementing an advanced PBL framework tailored specifically for biomedical AI education, involving 92 undergraduate and 156 graduate students from the joint Biomedical Engineering program of Georgia Institute of Technology and Emory University. Our approach emphasizes collaborative, interdisciplinary problem-solving through authentic biomedical AI challenges. The implementation led to measurable improvements in learning outcomes, evidenced by high research productivity (16 student-authored publications), consistently positive peer evaluations, and successful development of innovative computational methods addressing real biomedical challenges. Additionally, we examined the role of generative AI both as a teaching subject and an educational support tool within the PBL framework. Our study presents a practical and scalable roadmap for biomedical engineering departments aiming to integrate robust AI education into their curricula.