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Collaborating Authors

 Preibisch, Christine


Motion-Robust T2* Quantification from Gradient Echo MRI with Physics-Informed Deep Learning

arXiv.org Artificial Intelligence

Purpose: T2* quantification from gradient echo magnetic resonance imaging is particularly affected by subject motion due to the high sensitivity to magnetic field inhomogeneities, which are influenced by motion and might cause signal loss. Thus, motion correction is crucial to obtain high-quality T2* maps. Methods: We extend our previously introduced learning-based physics-informed motion correction method, PHIMO, by utilizing acquisition knowledge to enhance the reconstruction performance for challenging motion patterns and increase PHIMO's robustness to varying strengths of magnetic field inhomogeneities across the brain. We perform comprehensive evaluations regarding motion detection accuracy and image quality for data with simulated and real motion. Results: Our extended version of PHIMO outperforms the learning-based baseline methods both qualitatively and quantitatively with respect to line detection and image quality. Moreover, PHIMO performs on-par with a conventional state-of-the-art motion correction method for T2* quantification from gradient echo MRI, which relies on redundant data acquisition. Conclusion: PHIMO's competitive motion correction performance, combined with a reduction in acquisition time by over 40% compared to the state-of-the-art method, make it a promising solution for motion-robust T2* quantification in research settings and clinical routine.


Deep Learning for Retrospective Motion Correction in MRI: A Comprehensive Review

arXiv.org Artificial Intelligence

Motion represents one of the major challenges in magnetic resonance imaging (MRI). Since the MR signal is acquired in frequency space, any motion of the imaged object leads to complex artefacts in the reconstructed image in addition to other MR imaging artefacts. Deep learning has been frequently proposed for motion correction at several stages of the reconstruction process. The wide range of MR acquisition sequences, anatomies and pathologies of interest, and motion patterns (rigid vs. deformable and random vs. regular) makes a comprehensive solution unlikely. To facilitate the transfer of ideas between different applications, this review provides a detailed overview of proposed methods for learning-based motion correction in MRI together with their common challenges and potentials. This review identifies differences and synergies in underlying data usage, architectures, training and evaluation strategies. We critically discuss general trends and outline future directions, with the aim to enhance interaction between different application areas and research fields.