Today ship hull inspection including the examination of the external coating, detection of defects, and other types of external degradation such as corrosion and marine growth is conducted underwater by means of Remotely Operated Vehicles (ROVs). The inspection process consists of a manual video analysis which is a time-consuming and labor-intensive process. To address this, we propose an automatic video analysis system using deep learning and computer vision to improve upon existing methods that only consider spatial information on individual frames in underwater ship hull video inspection. By exploring the benefits of adding temporal information and analyzing frame-based classifiers, we propose a multi-label video classification model that exploits the self-attention mechanism of transformers to capture spatiotemporal attention in consecutive video frames. Our proposed method has demonstrated promising results and can serve as a benchmark for future research and development in underwater video inspection applications.

Wireless Capsule Endoscopy (WCE) is being increasingly used as an alternative imaging modality for complete and non-invasive screening of the gastrointestinal tract. Although this is advantageous in reducing unnecessary hospital admissions, it also demands that a WCE diagnostic protocol be in place so larger populations can be effectively screened. This calls for training and education protocols attuned specifically to this modality. Like training in other modalities such as traditional endoscopy, CT, MRI, etc., a WCE training protocol would require an atlas comprising of a large corpora of images that show vivid descriptions of pathologies and abnormalities, ideally observed over a period of time. Since such comprehensive atlases are presently lacking in WCE, in this work, we propose a deep learning method for utilizing already available studies across different institutions for the creation of a realistic WCE atlas using StyleGAN. We identify clinically relevant attributes in WCE such that synthetic images can be generated with selected attributes on cue. Beyond this, we also simulate several disease progression scenarios. The generated images are evaluated for realism and plausibility through three subjective online experiments with the participation of eight gastroenterology experts from three geographical locations and a variety of years of experience. The results from the experiments indicate that the images are highly realistic and the disease scenarios plausible. The images comprising the atlas are available publicly for use in training applications as well as supplementing real datasets for deep learning.

Due to the unequivocal need for understanding the decision processes of deep learning networks, both modal-dependent and model-agnostic techniques have become very popular. Although both of these ideas provide transparency for automated decision making, most methodologies focus on either using the modal-gradients (model-dependent) or ignoring the model internal states and reasoning with a model's behavior/outcome (model-agnostic) to instances. In this work, we propose a unified explanation approach that given an instance combines both model-dependent and agnostic explanations to produce an explanation set. The generated explanations are not only consistent in the neighborhood of a sample but can highlight causal relationships between image content and the outcome. We use Wireless Capsule Endoscopy (WCE) domain to illustrate the effectiveness of our explanations. The saliency maps generated by our approach are comparable or better on the softmax information score.

The lack of generalizability of deep learning approaches for the automated diagnosis of pathologies in Wireless Capsule Endoscopy (WCE) has prevented any significant advantages from trickling down to real clinical practices. As a result, disease management using WCE continues to depend on exhaustive manual investigations by medical experts. This explains its limited use despite several advantages. Prior works have considered using higher quality and quantity of labels as a way of tackling the lack of generalization, however this is hardly scalable considering pathology diversity not to mention that labeling large datasets encumbers the medical staff additionally. We propose using freely available domain knowledge as priors to learn more robust and generalizable representations. We experimentally show that domain priors can benefit representations by acting in proxy of labels, thereby significantly reducing the labeling requirement while still enabling fully unsupervised yet pathology-aware learning. We use the contrastive objective along with prior-guided views during pretraining, where the view choices inspire sensitivity to pathological information. Extensive experiments on three datasets show that our method performs better than (or closes gap with) the state-of-the-art in the domain, establishing a new benchmark in pathology classification and cross-dataset generalization, as well as scaling to unseen pathology categories.