Procrustean Bed for AI-Driven Retrosynthesis: A Unified Framework for Reproducible Evaluation
Morgunov, Anton, Batista, Victor S.
–arXiv.org Artificial Intelligence
Progress in computer-aided synthesis planning (CASP) is obscured by the lack of standardized evaluation infrastructure and the reliance on metrics that prioritize topological completion over chemical validity. We introduce RetroCast, a unified evaluation suite that standardizes heterogeneous model outputs into a common schema to enable statistically rigorous, apples-to-apples comparison. The framework includes a reproducible benchmarking pipeline with stratified sampling and bootstrapped confidence intervals, accompanied by SynthArena, an interactive platform for qualitative route inspection. We utilize this infrastructure to evaluate leading search-based and sequence-based algorithms on a new suite of standardized benchmarks. Our analysis reveals a divergence between "solvability" (stock-termination rate) and route quality; high solvability scores often mask chemical invalidity or fail to correlate with the reproduction of experimental ground truths. Furthermore, we identify a "complexity cliff" in which search-based methods, despite high solvability rates, exhibit a sharp performance decay in reconstructing long-range synthetic plans compared to sequence-based approaches. We release the full framework, benchmark definitions, and a standardized database of model predictions to support transparent and reproducible development in the field.
arXiv.org Artificial Intelligence
Dec-9-2025
- Country:
- Asia > Middle East
- Jordan (0.04)
- Europe > Monaco (0.04)
- North America > United States
- California > Los Angeles County > Long Beach (0.04)
- South America > Chile
- Asia > Middle East
- Genre:
- Research Report > New Finding (0.47)
- Technology: