Uncertainty
Bayesian Estimation of Causal Effects Using Proxies of a Latent Interference Network
Network interference occurs when treatments assigned to some units affect the outcomes of others. Traditional approaches often assume that the observed network correctly specifies the interference structure. However, in practice, researchers frequently only have access to proxy measurements of the interference network due to limitations in data collection or potential mismatches between measured networks and actual interference pathways. In this paper, we introduce a framework for estimating causal effects when only proxy networks are available. Our approach leverages a structural causal model that accommodates diverse proxy types, including noisy measurements, multiple data sources, and multilayer networks, and defines causal effects as interventions on population-level treatments. Since the true interference network is latent, estimation poses significant challenges. To overcome them, we develop a Bayesian inference framework. We propose a Block Gibbs sampler with Locally Informed Proposals to update the latent network, thereby efficiently exploring the high-dimensional posterior space composed of both discrete and continuous parameters. We illustrate the performance of our method through numerical experiments, demonstrating its accuracy in recovering causal effects even when only proxies of the interference network are available.
Diffusion-based supervised learning of generative models for efficient sampling of multimodal distributions
Tran, Hoang, Zhang, Zezhong, Bao, Feng, Lu, Dan, Zhang, Guannan
We propose a hybrid generative model for efficient sampling of high-dimensional, multimodal probability distributions for Bayesian inference. Traditional Monte Carlo methods, such as the Metropolis-Hastings and Langevin Monte Carlo sampling methods, are effective for sampling from single-mode distributions in high-dimensional spaces. However, these methods struggle to produce samples with the correct proportions for each mode in multimodal distributions, especially for distributions with well separated modes. To address the challenges posed by multimodality, we adopt a divide-and-conquer strategy. We start by minimizing the energy function with initial guesses uniformly distributed within the prior domain to identify all the modes of the energy function. Then, we train a classifier to segment the domain corresponding to each mode. After the domain decomposition, we train a diffusion-model-assisted generative model for each identified mode within its support. Once each mode is characterized, we employ bridge sampling to estimate the normalizing constant, allowing us to directly adjust the ratios between the modes. Our numerical examples demonstrate that the proposed framework can effectively handle multimodal distributions with varying mode shapes in up to 100 dimensions. An application to Bayesian inverse problem for partial differential equations is also provided.
ConDiSim: Conditional Diffusion Models for Simulation Based Inference
Nautiyal, Mayank, Hellander, Andreas, Singh, Prashant
Statistical inference of model parameters from empirical observations is a fundamental challenge in scientific research, enabling researchers to derive meaningful insights from complex simulation models. These parameters govern the behavior of simulators that replicate real-world phenomena, providing a bridge between theoretical constructs and empirical observations [Lavin et al., 2021]. Calibrating these parameters to ensure that simulator outputs align with observed data constitutes an inverse problem, formally defined within the framework of simulation-based inference (SBI) [Cranmer et al., 2020]. Solving this inverse problem involves addressing uncertainties arising from model stochasticity and potential multi-valuedness, where different sets of parameter values can produce similar observations or similar parameters may lead to varied outputs. Additionally, parameter inference becomes increasingly complex when simulators operate as'black boxes' with intractable likelihood functions, rendering traditional likelihood-based Bayesian methods impractical [Sisson et al., 2018].
Bias or Optimality? Disentangling Bayesian Inference and Learning Biases in Human Decision-Making
Recent studies claim that human behavior in a two-armed Bernoulli bandit (TABB) task is described by positivity and confirmation biases, implying that humans do not integrate new information objectively. However, we find that even if the agent updates its belief via objective Bayesian inference, fitting the standard Q-learning model with asymmetric learning rates still recovers both biases. Bayesian inference cast as an effective Q-learning algorithm has symmetric, though decreasing, learning rates. We explain this by analyzing the stochastic dynamics of these learning systems using master equations. We find that both confirmation bias and unbiased but decreasing learning rates yield the same behavioral signatures. Finally, we propose experimental protocols to disentangle true cognitive biases from artifacts of decreasing learning rates.
Contrastive Normalizing Flows for Uncertainty-Aware Parameter Estimation
Elsharkawy, Ibrahim, Kahn, Yonatan
Estimating physical parameters from data is a crucial application of machine learning (ML) in the physical sciences. However, systematic uncertainties, such as detector miscalibration, induce data distribution distortions that can erode statistical precision. In both high-energy physics (HEP) and broader ML contexts, achieving uncertainty-aware parameter estimation under these domain shifts remains an open problem. In this work, we address this challenge of uncertainty-aware parameter estimation for a broad set of tasks critical for HEP. We introduce a novel approach based on Contrastive Normalizing Flows (CNFs), which achieves top performance on the HiggsML Uncertainty Challenge dataset. Building on the insight that a binary classifier can approximate the model parameter likelihood ratio, we address the practical limitations of expressivity and the high cost of simulating high-dimensional parameter grids by embedding data and parameters in a learned CNF mapping. This mapping yields a tunable contrastive distribution that enables robust classification under shifted data distributions. Through a combination of theoretical analysis and empirical evaluations, we demonstrate that CNFs, when coupled with a classifier and established frequentist techniques, provide principled parameter estimation and uncertainty quantification through classification that is robust to data distribution distortions.
Modular Federated Learning: A Meta-Framework Perspective
Vicente, Frederico, Soares, Cláudia, Jakovetić, Dušan
Federated Learning (FL) enables distributed machine learning training while preserving privacy, representing a paradigm shift for data-sensitive and decentralized environments. Despite its rapid advancements, FL remains a complex and multifaceted field, requiring a structured understanding of its methodologies, challenges, and applications. In this survey, we introduce a meta-framework perspective, conceptualising FL as a composition of modular components that systematically address core aspects such as communication, optimisation, security, and privacy. We provide a historical contextualisation of FL, tracing its evolution from distributed optimisation to modern distributed learning paradigms. Additionally, we propose a novel taxonomy distinguishing Aggregation from Alignment, introducing the concept of alignment as a fundamental operator alongside aggregation. To bridge theory with practice, we explore available FL frameworks in Python, facilitating real-world implementation. Finally, we systematise key challenges across FL sub-fields, providing insights into open research questions throughout the meta-framework modules. By structuring FL within a meta-framework of modular components and emphasising the dual role of Aggregation and Alignment, this survey provides a holistic and adaptable foundation for understanding and advancing FL research and deployment.
A Sparse Bayesian Learning Algorithm for Estimation of Interaction Kernels in Motsch-Tadmor Model
In this paper, we investigate the data-driven identification of asymmetric interaction kernels in the Motsch-Tadmor model based on observed trajectory data. The model under consideration is governed by a class of semilinear evolution equations, where the interaction kernel defines a normalized, state-dependent Laplacian operator that governs collective dynamics. To address the resulting nonlinear inverse problem, we propose a variational framework that reformulates kernel identification using the implicit form of the governing equations, reducing it to a subspace identification problem. We establish an iden-tifiability result that characterizes conditions under which the interaction kernel can be uniquely recovered up to scale. To solve the inverse problem robustly, we develop a sparse Bayesian learning algorithm that incorporates informative priors for regularization, quantifies uncertainty, and enables principled model selection. Extensive numerical experiments on representative interacting particle systems demonstrate the accuracy, robustness, and interpretability of the proposed framework across a range of noise levels and data regimes.
A Data-Driven Probabilistic Framework for Cascading Urban Risk Analysis Using Bayesian Networks
Kumar, Chunduru Rohith, Shanmuk, PHD Surya, Srinivas, Prabhala Naga, Lankalapalli, Sri Venkatesh, Dwibedy, Debasis
The increasing complexity of cascading risks in urban systems necessitates robust, data-driven frameworks to model interdependencies across multiple domains. This study presents a foundational Bayesian network-based approach for analyzing cross-domain risk propagation across key urban domains, including air, water, electricity, agriculture, health, infrastructure, weather, and climate. Directed Acyclic Graphs (DAGs) are constructed using Bayesian Belief Networks (BBNs), with structure learning guided by Hill-Climbing search optimized through Bayesian Information Criterion (BIC) and K2 scoring. The framework is trained on a hybrid dataset that combines real-world urban indicators with synthetically generated data from Generative Adversarial Networks (GANs), and is further balanced using the Synthetic Minority Over-sampling Technique (SMOTE). Conditional Probability Tables (CPTs) derived from the learned structures enable interpretable probabilistic reasoning and quantify the likelihood of cascading failures. The results identify key intra- and inter-domain risk factors and demonstrate the framework's utility for proactive urban resilience planning. This work establishes a scalable, interpretable foundation for cascading risk assessment and serves as a basis for future empirical research in this emerging interdisciplinary field.
IIKL: Isometric Immersion Kernel Learning with Riemannian Manifold for Geometric Preservation
Chen, Zihao, Wang, Wenyong, Yang, Jiachen, Xiang, Yu
Geometric representation learning in preserving the intrinsic geometric and topological properties for discrete non-Euclidean data is crucial in scientific applications. Previous research generally mapped non-Euclidean discrete data into Euclidean space during representation learning, which may lead to the loss of some critical geometric information. In this paper, we propose a novel Isometric Immersion Kernel Learning (IIKL) method to build Riemannian manifold and isometrically induce Riemannian metric from discrete non-Euclidean data. We prove that Isometric immersion is equivalent to the kernel function in the tangent bundle on the manifold, which explicitly guarantees the invariance of the inner product between vectors in the arbitrary tangent space throughout the learning process, thus maintaining the geometric structure of the original data. Moreover, a novel parameterized learning model based on IIKL is introduced, and an alternating training method for this model is derived using Maximum Likelihood Estimation (MLE), ensuring efficient convergence. Experimental results proved that using the learned Riemannian manifold and its metric, our model preserved the intrinsic geometric representation of data in both 3D and high-dimensional datasets successfully, and significantly improved the accuracy of downstream tasks, such as data reconstruction and classification. It is showed that our method could reduce the inner product invariant loss by more than 90% compared to state-of-the-art (SOTA) methods, also achieved an average 40% improvement in downstream reconstruction accuracy and a 90% reduction in error for geometric metrics involving isometric and conformal.
FCPCA: Fuzzy clustering of high-dimensional time series based on common principal component analysis
Ma, Ziling, López-Oriona, Ángel, Ombao, Hernando, Sun, Ying
Clustering multivariate time series data is a crucial task in many domains, as it enables the identification of meaningful patterns and groups in time-evolving data. Traditional approaches, such as crisp clustering, rely on the assumption that clusters are sufficiently separated with little overlap. However, real-world data often defy this assumption, exhibiting overlapping distributions or overlapping clouds of points and blurred boundaries between clusters. Fuzzy clustering offers a compelling alternative by allowing partial membership in multiple clusters, making it well-suited for these ambiguous scenarios. Despite its advantages, current fuzzy clustering methods primarily focus on univariate time series, and for multivariate cases, even datasets of moderate dimensionality become computationally prohibitive. This challenge is further exacerbated when dealing with time series of varying lengths, leaving a clear gap in addressing the complexities of modern datasets. This work introduces a novel fuzzy clustering approach based on common principal component analysis to address the aforementioned shortcomings. Our method has the advantage of efficiently handling high-dimensional multivariate time series by reducing dimensionality while preserving critical temporal features. Extensive numerical results show that our proposed clustering method outperforms several existing approaches in the literature. An interesting application involving brain signals from different drivers recorded from a simulated driving experiment illustrates the potential of the approach.