The variational Bayesian (VB) approach is one of the best tractable approximations to the Bayesian estimation, and it was demonstrated to perform well in many applications. However, its good performance was not fully understood theoretically. For example, VB sometimes produces a sparse solution, which is regarded as a practical advantage of VB, but such sparsity is hardly observed in the rigorous Bayesian estimation. In this paper, we focus on probabilistic PCA and give more theoretical insight into the empirical success of VB. More specifically, for the situation where the noise variance is unknown, we derive a sufficient condition for perfect recovery of the true PCA dimensionality in the large-scale limit when the size of an observed matrix goes to infinity. In our analysis, we obtain bounds for a noise variance estimator and simple closed-form solutions for other parameters, which themselves are actually very useful for better implementation of VB-PCA.

The empirical success of the belief propagation approximate inference algorithm has inspired numerous theoretical and algorithmic advances. Yet, for continuous non-Gaussian domains performing belief propagation remains a challenging task: recent innovations such as nonparametric or kernel belief propagation, while useful, come with a substantial computational cost and offer little theoretical guarantees, even for tree structured models. In this work we present Nonparanormal BP for performing efficient inference on distributions parameterized by a Gaussian copulas network and any univariate marginals. For tree structured networks, our approach is guaranteed to be exact for this powerful class of non-Gaussian models. Importantly, the method is as efficient as standard Gaussian BP, and its convergence properties do not depend on the complexity of the univariate marginals, even when a nonparametric representation is used.

The usability of Brain Computer Interfaces (BCI) based on the P300 speller is severely hindered by the need for long training times and many repetitions of the same stimulus. In this contribution we introduce a set of unsupervised hierarchical probabilistic models that tackle both problems simultaneously by incorporating prior knowledge from two sources: information from other training subjects (through transfer learning) and information about the words being spelled (through language models). We show, that due to this prior knowledge, the performance of the unsupervised models parallels and in some cases even surpasses that of supervised models, while eliminating the tedious training session.

The partition function plays a key role in probabilistic modeling including conditional random fields, graphical models, and maximum likelihood estimation. To optimize partition functions, this article introduces a quadratic variational upper bound. This inequality facilitates majorization methods: optimization of complicated functions through the iterative solution of simpler sub-problems. Such bounds remain efficient to compute even when the partition function involves a graphical model (with small tree-width) or in latent likelihood settings. For large-scale problems, low-rank versions of the bound are provided and outperform LBFGS as well as first-order methods. Several learning applications are shown and reduce to fast and convergent update rules. Experimental results show advantages over state-of-the-art optimization methods.

Learning temporal dependencies between variables over continuous time is an important and challenging task. Continuous-time Bayesian networks effectively model such processes but are limited by the number of conditional intensity matrices, which grows exponentially in the number of parents per variable. We develop a partition-based representation using regression trees and forests whose parameter spaces grow linearly in the number of node splits. Using a multiplicative assumption we show how to update the forest likelihood in closed form, producing efficient model updates. Our results show multiplicative forests can be learned from few temporal trajectories with large gains in performance and scalability.

We present a truncation-free online variational inference algorithm for Bayesian nonparametric models. Unlike traditional (online) variational inference algorithms that require truncations for the model or the variational distribution, our method adapts model complexity on the fly. Our experiments for Dirichlet process mixture models and hierarchical Dirichlet process topic models on two large-scale data sets show better performance than previous online variational inference algorithms.

We present a nonparametric Bayesian approach to inverse reinforcement learning (IRL) for multiple reward functions. Most previous IRL algorithms assume that the behaviour data is obtained from an agent who is optimizing a single reward function, but this assumption is hard to be met in practice. Our approach is based on integrating the Dirichlet process mixture model into Bayesian IRL. We provide an efficient Metropolis-Hastings sampling algorithm utilizing the gradient of the posterior to estimate the underlying reward functions, and demonstrate that our approach outperforms the previous ones via experiments on a number of problem domains.

Statistical features of neuronal spike trains are known to be non-Poisson. Here, we investigate the extent to which the non-Poissonian feature affects the efficiency of transmitting information on fluctuating firing rates. For this purpose, we introduce the Kullbuck-Leibler (KL) divergence as a measure of the efficiency of information encoding, and assume that spike trains are generated by time-rescaled renewal processes. We show that the KL divergence determines the lower bound of the degree of rate fluctuations below which the temporal variation of the firing rates is undetectable from sparse data. We also show that the KL divergence, as well as the lower bound, depends not only on the variability of spikes in terms of the coefficient of variation, but also significantly on the higher-order moments of interspike interval (ISI) distributions. We examine three specific models that are commonly used for describing the stochastic nature of spikes (the gamma, inverse Gaussian (IG) and lognormal ISI distributions), and find that the time-rescaled renewal process with the IG distribution achieves the largest KL divergence, followed by the lognormal and gamma distributions.

We introduce a new learning algorithm, named smooth-projected neighborhood pursuit, for estimating high dimensional undirected graphs. In particularly, we focus on the nonparanormal graphical model and provide theoretical guarantees for graph estimation consistency. In addition to new computational and theoretical analysis, we also provide an alternative view to analyze the tradeoff between computational efficiencyand statistical error under a smoothing optimization framework. Numerical results on both synthetic and real datasets are provided to support our theory.

A special case that has received significant attention is the Plackett-Luce model, for which fast inference methods for maximum likelihood estimators are available. This paper develops conditions on general random utility models that enable fast inference within a Bayesian framework through MC-EM, providing concave loglikelihood functionsand bounded sets of global maxima solutions. Results on both real-world and simulated data provide support for the scalability of the approach andcapability for model selection among general random utility models including Plackett-Luce.