Uncertainty
Variational Reformulation of Bayesian Inverse Problems
Tsilifis, Panagiotis, Bilionis, Ilias, Katsounaros, Ioannis, Zabaras, Nicholas
The classical approach to inverse problems is based on the optimization of a misfit function. Despite its computational appeal, such an approach suffers from many shortcomings, e.g., non-uniqueness of solutions, modeling prior knowledge, etc. The Bayesian formalism to inverse problems avoids most of the difficulties encountered by the optimization approach, albeit at an increased computational cost. In this work, we use information theoretic arguments to cast the Bayesian inference problem in terms of an optimization problem. The resulting scheme combines the theoretical soundness of fully Bayesian inference with the computational efficiency of a simple optimization.
Variational Bayes for Merging Noisy Databases
Broderick, Tamara, Steorts, Rebecca C.
Bayesian entity resolution merges together multiple, noisy databases and returns the minimal collection of unique individuals represented, together with their true, latent record values. Bayesian methods allow flexible generative models that share power across databases as well as principled quantification of uncertainty for queries of the final, resolved database. However, existing Bayesian methods for entity resolution use Markov monte Carlo method (MCMC) approximations and are too slow to run on modern databases containing millions or billions of records. Instead, we propose applying variational approximations to allow scalable Bayesian inference in these models. We derive a coordinate-ascent approximation for mean-field variational Bayes, qualitatively compare our algorithm to existing methods, note unique challenges for inference that arise from the expected distribution of cluster sizes in entity resolution, and discuss directions for future work in this domain.
Thompson sampling with the online bootstrap
Eckles, Dean, Kaptein, Maurits
Thompson sampling provides a solution to bandit problems in which new observations are allocated to arms with the posterior probability that an arm is optimal. While sometimes easy to implement and asymptotically optimal, Thompson sampling can be computationally demanding in large scale bandit problems, and its performance is dependent on the model fit to the observed data. We introduce bootstrap Thompson sampling (BTS), a heuristic method for solving bandit problems which modifies Thompson sampling by replacing the posterior distribution used in Thompson sampling by a bootstrap distribution. We first explain BTS and show that the performance of BTS is competitive to Thompson sampling in the well-studied Bernoulli bandit case. Subsequently, we detail why BTS using the online bootstrap is more scalable than regular Thompson sampling, and we show through simulation that BTS is more robust to a misspecified error distribution. BTS is an appealing modification of Thompson sampling, especially when samples from the posterior are otherwise not available or are costly.
Scene Image is Non-Mutually Exclusive - A Fuzzy Qualitative Scene Understanding
Lim, Chern Hong, Risnumawan, Anhar, Chan, Chee Seng
Ambiguity or uncertainty is a pervasive element of many real world decision making processes. Variation in decisions is a norm in this situation when the same problem is posed to different subjects. Psychological and metaphysical research had proven that decision making by human is subjective. It is influenced by many factors such as experience, age, background, etc. Scene understanding is one of the computer vision problems that fall into this category. Conventional methods relax this problem by assuming scene images are mutually exclusive; and therefore, focus on developing different approaches to perform the binary classification tasks. In this paper, we show that scene images are non-mutually exclusive, and propose the Fuzzy Qualitative Rank Classifier (FQRC) to tackle the aforementioned problems. The proposed FQRC provides a ranking interpretation instead of binary decision. Evaluations in term of qualitative and quantitative using large numbers and challenging public scene datasets have shown the effectiveness of our proposed method in modeling the non-mutually exclusive scene images.
PAC-Bayesian AUC classification and scoring
Ridgway, James, Alquier, Pierre, Chopin, Nicolas, Liang, Feng
We develop a scoring and classification procedure based on the PAC-Bayesian approach and the AUC (Area Under Curve) criterion. We focus initially on the class of linear score functions. We derive PAC-Bayesian non-asymptotic bounds for two types of prior for the score parameters: a Gaussian prior, and a spike-and-slab prior; the latter makes it possible to perform feature selection. One important advantage of our approach is that it is amenable to powerful Bayesian computational tools. We derive in particular a Sequential Monte Carlo algorithm, as an efficient method which may be used as a gold standard, and an Expectation-Propagation algorithm, as a much faster but approximate method. We also extend our method to a class of non-linear score functions, essentially leading to a nonparametric procedure, by considering a Gaussian process prior.
Bayesian CP Factorization of Incomplete Tensors with Automatic Rank Determination
Zhao, Qibin, Zhang, Liqing, Cichocki, Andrzej
CANDECOMP/PARAFAC (CP) tensor factorization of incomplete data is a powerful technique for tensor completion through explicitly capturing the multilinear latent factors. The existing CP algorithms require the tensor rank to be manually specified, however, the determination of tensor rank remains a challenging problem especially for CP rank. In addition, existing approaches do not take into account uncertainty information of latent factors, as well as missing entries. To address these issues, we formulate CP factorization using a hierarchical probabilistic model and employ a fully Bayesian treatment by incorporating a sparsity-inducing prior over multiple latent factors and the appropriate hyperpriors over all hyperparameters, resulting in automatic rank determination. To learn the model, we develop an efficient deterministic Bayesian inference algorithm, which scales linearly with data size. Our method is characterized as a tuning parameter-free approach, which can effectively infer underlying multilinear factors with a low-rank constraint, while also providing predictive distributions over missing entries. Extensive simulations on synthetic data illustrate the intrinsic capability of our method to recover the ground-truth of CP rank and prevent the overfitting problem, even when a large amount of entries are missing. Moreover, the results from real-world applications, including image inpainting and facial image synthesis, demonstrate that our method outperforms state-of-the-art approaches for both tensor factorization and tensor completion in terms of predictive performance.
Distributed Estimation, Information Loss and Exponential Families
Distributed learning of probabilistic models from multiple data repositories with minimum communication is increasingly important. We study a simple communication-efficient learning framework that first calculates the local maximum likelihood estimates (MLE) based on the data subsets, and then combines the local MLEs to achieve the best possible approximation to the global MLE given the whole dataset. We study this framework's statistical properties, showing that the efficiency loss compared to the global setting relates to how much the underlying distribution families deviate from full exponential families, drawing connection to the theory of information loss by Fisher, Rao and Efron. We show that the "full-exponential-family-ness" represents the lower bound of the error rate of arbitrary combinations of local MLEs, and is achieved by a KL-divergence-based combination method but not by a more common linear combination method. We also study the empirical properties of both methods, showing that the KL method significantly outperforms linear combination in practical settings with issues such as model misspecification, non-convexity, and heterogeneous data partitions.
Projecting Ising Model Parameters for Fast Mixing
Inference in general Ising models is difficult, due to high treewidth making tree-based algorithms intractable. Moreover, when interactions are strong, Gibbs sampling may take exponential time to converge to the stationary distribution. We present an algorithm to project Ising model parameters onto a parameter set that is guaranteed to be fast mixing, under several divergences. We find that Gibbs sampling using the projected parameters is more accurate than with the original parameters when interaction strengths are strong and when limited time is available for sampling.
Sequential Monte Carlo for Graphical Models
Naesseth, Christian A., Lindsten, Fredrik, Schön, Thomas B.
We propose a new framework for how to use sequential Monte Carlo (SMC) algorithms for inference in probabilistic graphical models (PGM). Via a sequential decomposition of the PGM we find a sequence of auxiliary distributions defined on a monotonically increasing sequence of probability spaces. By targeting these auxiliary distributions using SMC we are able to approximate the full joint distribution defined by the PGM. One of the key merits of the SMC sampler is that it provides an unbiased estimate of the partition function of the model. We also show how it can be used within a particle Markov chain Monte Carlo framework in order to construct high-dimensional block-sampling algorithms for general PGMs.
Gamma Processes, Stick-Breaking, and Variational Inference
Roychowdhury, Anirban, Kulis, Brian
While most Bayesian nonparametric models in machine learning have focused on the Dirichlet process, the beta process, or their variants, the gamma process has recently emerged as a useful nonparametric prior in its own right. Current inference schemes for models involving the gamma process are restricted to MCMC-based methods, which limits their scalability. In this paper, we present a variational inference framework for models involving gamma process priors. Our approach is based on a novel stick-breaking constructive definition of the gamma process. We prove correctness of this stick-breaking process by using the characterization of the gamma process as a completely random measure (CRM), and we explicitly derive the rate measure of our construction using Poisson process machinery. We also derive error bounds on the truncation of the infinite process required for variational inference, similar to the truncation analyses for other nonparametric models based on the Dirichlet and beta processes. Our representation is then used to derive a variational inference algorithm for a particular Bayesian nonparametric latent structure formulation known as the infinite Gamma-Poisson model, where the latent variables are drawn from a gamma process prior with Poisson likelihoods. Finally, we present results for our algorithms on nonnegative matrix factorization tasks on document corpora, and show that we compare favorably to both sampling-based techniques and variational approaches based on beta-Bernoulli priors.