Uncertainty
MadMiner: Machine learning-based inference for particle physics
Brehmer, Johann, Kling, Felix, Espejo, Irina, Cranmer, Kyle
The legacy measurements of the LHC will require analyzing high-dimensional event data for subtle kinematic signatures, which is challenging for established analysis methods. Recently, a powerful family of multivariate inference techniques that leverage both matrix element information and machine learning has been developed. This approach neither requires the reduction of high-dimensional data to summary statistics nor any simplifications to the underlying physics or detector response. In this paper we introduce MadMiner, a Python module that streamlines the steps involved in this procedure. Wrapping around MadGraph5_aMC and Pythia 8, it supports almost any physics process and model. To aid phenomenological studies, the tool also wraps around Delphes 3, though it is extendable to a full Geant4-based detector simulation. We demonstrate the use of MadMiner in an example analysis of dimension-six operators in ttH production, finding that the new techniques substantially increase the sensitivity to new physics.
On the relationship between variational inference and adaptive importance sampling
Finke, Axel, Thiery, Alexandre H.
The importance weighted autoencoder (IWAE) (Burda et al., 2016) and reweighted wake-sleep (RWS) algorithm (Bornschein and Bengio, 2015) are popular approaches which employ multiple samples to achieve bias reductions compared to standard variational methods. However, their relationship has hitherto been unclear. We introduce a simple, unified framework for multi-sample variational inference termed adaptive importance sampling for learning (AISLE) and show that it admits IWAE and RWS as special cases. Through a principled application of a variance-reduction technique from Tucker et al. (2019), we also show that the sticking-the-landing (STL) gradient from Roeder et al. (2017), which previously lacked theoretical justification, can be recovered as a special case of RWS (and hence of AISLE). In particular, this indicates that the breakdown of RWS -- but not of STL -- observed in Tucker et al. (2019) may not be attributable to the lack of a joint objective for the generative-model and inference-network parameters as previously conjectured. Finally, we argue that our adaptive-importance-sampling interpretation of variational inference leads to more natural and principled extensions to sequential Monte Carlo methods than the IWAE-type multi-sample objective interpretation.
Classified Regression for Bayesian Optimization: Robot Learning with Unknown Penalties
Marco, Alonso, Baumann, Dominik, Hennig, Philipp, Trimpe, Sebastian
Learning robot controllers by minimizing a black-box objective cost using Bayesian optimization (BO) can be time-consuming and challenging. It is very often the case that some roll-outs result in failure behaviors, causing premature experiment detention. In such cases, the designer is forced to decide on heuristic cost penalties because the acquired data is often scarce, or not comparable with that of the stable policies. To overcome this, we propose a Bayesian model that captures exactly what we know about the cost of unstable controllers prior to data collection: Nothing, except that it should be a somewhat large number. The resulting Bayesian model, approximated with a Gaussian process, predicts high cost values in regions where failures are likely to occur. In this way, the model guides the BO exploration toward regions of stability. We demonstrate the benefits of the proposed model in several illustrative and statistical synthetic benchmarks, and also in experiments on a real robotic platform. In addition, we propose and experimentally validate a new BO method to account for unknown constraints. Such method is an extension of Max-Value Entropy Search, a recent information-theoretic method, to solve unconstrained global optimization problems.
Generic Prediction Architecture Considering both Rational and Irrational Driving Behaviors
Hu, Yeping, Sun, Liting, Tomizuka, Masayoshi
Accurately predicting future behaviors of surrounding vehicles is an essential capability for autonomous vehicles in order to plan safe and feasible trajectories. The behaviors of others, however, are full of uncertainties. Both rational and irrational behaviors exist, and the autonomous vehicles need to be aware of this in their prediction module. The prediction module is also expected to generate reasonable results in the presence of unseen and corner scenarios. Two types of prediction models are typically used to solve the prediction problem: learning-based model and planning-based model. Learning-based model utilizes real driving data to model the human behaviors. Depending on the structure of the data, learning-based models can predict both rational and irrational behaviors. But the balance between them cannot be customized, which creates challenges in generalizing the prediction results. Planning-based model, on the other hand, usually assumes human as a rational agent, i.e., it anticipates only rational behavior of human drivers. In this paper, a generic prediction architecture is proposed to address various rationalities in human behavior. We leverage the advantages from both learning-based and planning-based prediction models. The proposed approach is able to predict continuous trajectories that well-reflect possible future situations of other drivers. Moreover, the prediction performance remains stable under various unseen driving scenarios. A case study under a real-world roundabout scenario is provided to demonstrate the performance and capability of the proposed prediction architecture.
The continuous Bernoulli: fixing a pervasive error in variational autoencoders
Loaiza-Ganem, Gabriel, Cunningham, John P.
Variational autoencoders (VAE) have quickly become a central tool in machine learning, applicable to a broad range of data types and latent variable models. By far the most common first step, taken by seminal papers and by core software libraries alike, is to model MNIST data using a deep network parameterizing a Bernoulli likelihood. This practice contains what appears to be and what is often set aside as a minor inconvenience: the pixel data is [0, 1] valued, not {0, 1} as supported by the Bernoulli likelihood. Here we show that, far from being a triviality or nuisance that is convenient to ignore, this error has profound importance to VAE, both qualitative and quantitative. We introduce and fully characterize a new [0, 1]-supported, single parameter distribution: the continuous Bernoulli, which patches this pervasive bug in VAE. This distribution is not nitpicking; it produces meaningful performance improvements across a range of metrics and datasets, including sharper image samples, and suggests a broader class of performant VAE.
Calculating conditional probability in Bernoulli mixture model
I'm following the book Pattern recognition and machine learning by Bishop on Bernoulli mixture model, and trying to code it. But I don't understand how to calculate the conditional probability (page 446 of the first edition) So in the E-step I'm supposed to calculate this. But it is said that we should use the log of the probability, so as to avoid numerical underflow. So how do i apply it here? I can't see any way to do it.
Robust subsampling-based sparse Bayesian inference to tackle four challenges (large noise, outliers, data integration, and extrapolation) in the discovery of physical laws from data
The derivation of physical laws is a dominant topic in scientific research. We propose a new method capable of discovering the physical laws from data to tackle four challenges in the previous methods. The four challenges are: (1) large noise in the data, (2) outliers in the data, (3) integrating the data collected from different experiments, and (4) extrapolating the solutions to the areas that have no available data. To resolve these four challenges, we try to discover the governing differential equations and develop a model-discovering method based on sparse Bayesian inference and subsampling. The subsampling technique is used for improving the accuracy of the Bayesian learning algorithm here, while it is usually employed for estimating statistics or speeding up algorithms elsewhere. The optimal subsampling size is moderate, neither too small nor too big. Another merit of our method is that it can work with limited data by the virtue of Bayesian inference. We demonstrate how to use our method to tackle the four aforementioned challenges step by step through numerical examples: (1) predator-prey model with noise, (2) shallow water equations with outliers, (3) heat diffusion with random initial and boundary conditions, and (4) fish-harvesting problem with bifurcations. Numerical results show that the robustness and accuracy of our new method is significantly better than the other model-discovering methods and traditional regression methods.
Coupling material and mechanical design processes via computer model calibration
Ehrett, Carl, Brown, D. Andrew, Chodora, Evan, Kitchens, Christopher, Atamturktur, Sez
Real-world optimization problems typically involve multiple objectives. This is particularly true in the design of engineering systems, where multiple performance outcomes are balanced against budgetary constraints. Among the complexities of optimizing over multiple objectives is the effect of uncertainties in the problem. Design is guided by models known to be imperfect, systems are built using materials with uncertainty regarding their properties, variations occur in the construction of designed systems, and so on. These imperfections, uncertainties and errors cause uncertainty also in the solution to a design problem. In traditional engineering design, one designs a system after choosing a material with appropriate properties for the project from a database of known materials. As a result, the design of the system is constrained by the initial material selection. By coupling material discovery and engineering system design, we can combine these two traditionally separate processes under the umbrella of a unified multiple objective optimization problem. In this paper, we cast the engineering design problem in the framework of computer model calibration.
Bayesian Inference with Generative Adversarial Network Priors
Bayesian inference is used extensively to infer and to quantify the uncertainty in a field of interest from a measurement of a related field when the two are linked by a physical model. Despite its many applications, Bayesian inference faces challenges when inferring fields that have discrete representations of large dimension, and/or have prior distributions that are difficult to represent mathematically. In this manuscript we consider the use of Generative Adversarial Networks (GANs) in addressing these challenges. A GAN is a type of deep neural network equipped with the ability to learn the distribution implied by multiple samples of a given field. Once trained on these samples, the generator component of a GAN maps the iid components of a low-dimensional latent vector to an approximation of the distribution of the field of interest. In this work we demonstrate how this approximate distribution may be used as a prior in a Bayesian update, and how it addresses the challenges associated with characterizing complex prior distributions and the large dimension of the inferred field. We demonstrate the efficacy of this approach by applying it to the problem of inferring and quantifying uncertainty in the initial temperature field in a heat conduction problem from a noisy measurement of the temperature at later time.
Classification with the matrix-variate-$t$ distribution
Thompson, Geoffrey Z., Maitra, Ranjan, Meeker, William Q., Bastawros, Ashraf
Matrix-variate distributions can intuitively model the dependence structure of matrix-valued observations that arise in applications with multivariate time series, spatio-temporal or repeated measures. This paper develops an Expectation-Maximization algorithm for discriminant analysis and classification with matrix-variate $t$-distributions. The methodology shows promise on simulated datasets or when applied to the forensic matching of fractured surfaces or the classification of functional Magnetic Resonance, satellite or hand gestures images.