Uncertainty
Knowledge representation and diagnostic inference using Bayesian networks in the medical discourse
Flügge, Sebastian, Zimmer, Sandra, Petersohn, Uwe
For the diagnostic inference under uncertainty Bayesian networks are investigated. The method is based on an adequate uniform representation of the necessary knowledge. This includes both generic and experience-based specific knowledge, which is stored in a knowledge base. For knowledge processing, a combination of the problem-solving methods of concept-based and case-based reasoning is used. Concept-based reasoning is used for the diagnosis, therapy and medication recommendation and evaluation of generic knowledge. Exceptions in the form of specific patient cases are processed by case-based reasoning. In addition, the use of Bayesian networks allows to deal with uncertainty, fuzziness and incompleteness. Thus, the valid general concepts can be issued according to their probability. To this end, various inference mechanisms are introduced and subsequently evaluated within the context of a developed prototype. Tests are employed to assess the classification of diagnoses by the network.
Compositional uncertainty in deep Gaussian processes
Ustyuzhaninov, Ivan, Kazlauskaite, Ieva, Kaiser, Markus, Bodin, Erik, Campbell, Neill D. F., Ek, Carl Henrik
Gaussian processes (GPs) are nonparametric priors over functions, and fitting a GP to the data implies computing the posterior distribution of the functions consistent with the observed data. Similarly, deep Gaussian processes (DGPs) [Damianou:2013] should allow us to compute the posterior distribution of compositions of multiple functions giving rise to the observations. However, exact Bayesian inference is usually intractable for DGPs, motivating the use of various approximations. We show that the simplifying assumptions for a common type of Variational inference approximation imply that all but one layer of a DGP collapse to a deterministic transformation. We argue that such an inference scheme is suboptimal, not taking advantage of the potential of the model to discover the compositional structure in the data, and propose possible modifications addressing this issue.
Prediction of rare feature combinations in population synthesis: Application of deep generative modelling
Garrido, Sergio, Borysov, Stanislav S., Pereira, Francisco C., Rich, Jeppe
In population synthesis applications, when considering populations with many attributes, a fundamental problem is the estimation of rare combinations of feature attributes. Unsurprisingly, it is notably more difficult to reliably representthe sparser regions of such multivariate distributions and in particular combinations of attributes which are absent from the original sample. In the literature this is commonly known as sampling zeros for which no systematic solution has been proposed so far. In this paper, two machine learning algorithms, from the family of deep generative models,are proposed for the problem of population synthesis and with particular attention to the problem of sampling zeros. Specifically, we introduce the Wasserstein Generative Adversarial Network (WGAN) and the Variational Autoencoder(VAE), and adapt these algorithms for a large-scale population synthesis application. The models are implemented on a Danish travel survey with a feature-space of more than 60 variables. The models are validated in a cross-validation scheme and a set of new metrics for the evaluation of the sampling-zero problem is proposed. Results show how these models are able to recover sampling zeros while keeping the estimation of truly impossible combinations, the structural zeros, at a comparatively low level. Particularly, for a low dimensional experiment, the VAE, the marginal sampler and the fully random sampler generate 5%, 21% and 26%, respectively, more structural zeros per sampling zero generated by the WGAN, while for a high dimensional case, these figures escalate to 44%, 2217% and 170440%, respectively. This research directly supports the development of agent-based systems and in particular cases where detailed socio-economic or geographical representations are required.
Inference for multiple object tracking: A Bayesian nonparametric approach
In recent years, multi object tracking (MOT) problem has drawn attention to it and has been studied in various research areas. However, some of the challenging problems including time dependent cardinality, unordered measurement set, and object labeling remain unclear. In this paper, we propose robust nonparametric methods to model the state prior for MOT problem. These models are shown to be more flexible and robust compared to existing methods. In particular, the overall approach estimates time dependent object cardinality, provides object labeling, and identifies object associated measurements. Moreover, our proposed framework dynamically contends with the birth/death and survival of the objects through dependent nonparametric processes. We present Inference algorithms that demonstrate the utility of the dependent nonparametric models for tracking. We employ Monte Carlo sampling methods to demonstrate the proposed algorithms efficiently learn the trajectory of objects from noisy measurements. The computational results display the performance of the proposed algorithms and comparison not only between one another, but also between proposed algorithms and labeled multi Bernoulli tracker.
Band-Limited Gaussian Processes: The Sinc Kernel
We propose a novel class of Gaussian processes (GPs) whose spectra have compact support, meaning that their sample trajectories are almost-surely band limited. As a complement to the growing literature on spectral design of covariance kernels, the core of our proposal is to model power spectral densities through a rectangular function, which results in a kernel based on the sinc function with straightforward extensions to non-centred (around zero frequency) and frequency-varying cases. In addition to its use in regression, the relationship between the sinc kernel and the classic theory is illuminated, in particular, the Shannon-Nyquist theorem is interpreted as posterior reconstruction under the proposed kernel. Additionally, we show that the sinc kernel is instrumental in two fundamental signal processing applications: first, in stereo amplitude modulation, where the non-centred sinc kernel arises naturally. Second, for band-pass filtering, where the proposed kernel allows for a Bayesian treatment that is robust to observation noise and missing data. The developed theory is complemented with illustrative graphic examples and validated experimentally using real-world data.
Learning to Benchmark: Determining Best Achievable Misclassification Error from Training Data
Noshad, Morteza, Xu, Li, Hero, Alfred
We address the problem of learning to benchmark the best achievable classifier performance. In this problem the objective is to establish statistically consistent estimates of the Bayes misclassification error rate without having to learn a Bayes-optimal classifier. Our learning to benchmark framework improves on previous work on learning bounds on Bayes misclassification rate since it learns the {\it exact} Bayes error rate instead of a bound on error rate. We propose a benchmark learner based on an ensemble of $\epsilon$-ball estimators and Chebyshev approximation. Under a smoothness assumption on the class densities we show that our estimator achieves an optimal (parametric) mean squared error (MSE) rate of $O(N^{-1})$, where $N$ is the number of samples. Experiments on both simulated and real datasets establish that our proposed benchmark learning algorithm produces estimates of the Bayes error that are more accurate than previous approaches for learning bounds on Bayes error probability.
Distance Assessment and Hypothesis Testing of High-Dimensional Samples using Variational Autoencoders
Inácio, Marco Henrique de Almeida, Izbicki, Rafael, Gyires-Tóth, Bálint
Given two distinct datasets, an important question is if they have arisen from the the same data generating function or alternatively how their data generating functions diverge from one another. In this paper, we introduce an approach for measuring the distance between two datasets with high dimensionality using variational autoencoders. This approach is augmented by a permutation hypothesis test in order to check the hypothesis that the data generating distributions are the same within a significance level. We evaluate both the distance measurement and hypothesis testing approaches on generated and on public datasets. According to the results the proposed approach can be used for data exploration (e.g. by quantifying the discrepancy/separability between categories of images), which can be particularly useful in the early phases of the pipeline of most machine learning projects.
Extending and Automating Basic Probability Theory with Propositional Computability Logic
Classical probability theory[2] is formulated using sets. Unfortuna tely, the language of sets lacks expressiveness and is, in a sense, a low-level'assembly language' of the probability theory. In this paper, we develop a'high -level approach' to classical probability theory with propositional compu tability logic[1] (CoL). Unlike other formalisms such as sets, logic and linear log ic, computability logic is built on the notion of events/games, which is cent ral to probability theory. Therefore, CoL is a perfect place to begin th e study of automating probability theory. To be specific, CoL is well-suited to describing complex (sequential/parallel) experiments and events, and more expressive than set operation s. In contrast, classical probability theory - based on,, etc - is designed to represent mainly the simple/additive events - the events that occur under a single experiment. Naturally, we need to talk about composite/multiplicative events - events that occur under two different experiments. Developing probability along this line requires a new, powerful language.
What Is Probability?
Uncertainty involves making decisions with incomplete information, and this is the way we generally operate in the world. Handling uncertainty is typically described using everyday words like chance, luck, and risk. Probability is a field of mathematics that gives us the language and tools to quantify the uncertainty of events and reason in a principled manner. In this post, you will discover a gentle introduction to probability. Photo by Emma Jane Hogbin Westby, some rights reserved.
Multi-fidelity Gaussian Process Bandit Optimisation
Kandasamy, Kirthevasan, Dasarathy, Gautam, Oliva, Junier, Schneider, Jeff, Póczos, Barnabás
In many scientific and engineering applications, we are tasked with the maximisation of an expensive to evaluate black box function f. Traditional settings for this problem assume just the availability of this single function. However, in many cases, cheap approximations to f may be obtainable. For example, the expensive real world behaviour of a robot can be approximated by a cheap computer simulation. We can use these approximations to eliminate low function value regions cheaply and use the expensive evaluations of f in a small but promising region and speedily identify the optimum. We formalise this task as a multi-fidelity bandit problem where the target function and its approximations are sampled from a Gaussian process. We develop MF-GP-UCB, a novel method based on upper confidence bound techniques. In our theoretical analysis we demonstrate that it exhibits precisely the above behaviour and achieves better bounds on the regret than strategies which ignore multi-fidelity information. Empirically, MF-GP-UCB outperforms such naive strategies and other multi-fidelity methods on several synthetic and real experiments.