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 Uncertainty


Online Probabilistic Model Identification using Adaptive Recursive MCMC

arXiv.org Artificial Intelligence

Although the Bayesian paradigm offers a formal framework for estimating the entire probability distribution over uncertain parameters, its online implementation can be challenging due to high computational costs. We suggest the Adaptive Recursive Markov Chain Monte Carlo (ARMCMC) method, which eliminates the shortcomings of conventional online techniques while computing the entire probability density function of model parameters. The limitations to Gaussian noise, the application to only linear in the parameters (LIP) systems, and the persistent excitation (PE) needs are some of these drawbacks. In ARMCMC, a temporal forgetting factor (TFF)-based variable jump distribution is proposed. The forgetting factor can be presented adaptively using the TFF in many dynamical systems as an alternative to a constant hyperparameter. By offering a trade-off between exploitation and exploration, the specific jump distribution has been optimised towards hybrid/multi-modal systems that permit inferences among modes. These trade-off are adjusted based on parameter evolution rate. We demonstrate that ARMCMC requires fewer samples than conventional MCMC methods to achieve the same precision and reliability. We demonstrate our approach using parameter estimation in a soft bending actuator and the Hunt-Crossley dynamic model, two challenging hybrid/multi-modal benchmarks. Additionally, we compare our method with recursive least squares and the particle filter, and show that our technique has significantly more accurate point estimates as well as a decrease in tracking error of the value of interest.


When Rigidity Hurts: Soft Consistency Regularization for Probabilistic Hierarchical Time Series Forecasting

arXiv.org Artificial Intelligence

Probabilistic hierarchical time-series forecasting is an important variant of time-series forecasting, where the goal is to model and forecast multivariate time-series that have underlying hierarchical relations. Most methods focus on point predictions and do not provide well-calibrated probabilistic forecasts distributions. Recent state-of-art probabilistic forecasting methods also impose hierarchical relations on point predictions and samples of distribution which does not account for coherency of forecast distributions. Previous works also silently assume that datasets are always consistent with given hierarchical relations and do not adapt to real-world datasets that show deviation from this assumption. We close both these gap and propose PROFHiT, which is a fully probabilistic hierarchical forecasting model that jointly models forecast distribution of entire hierarchy. PROFHiT uses a flexible probabilistic Bayesian approach and introduces a novel Distributional Coherency regularization to learn from hierarchical relations for entire forecast distribution that enables robust and calibrated forecasts as well as adapt to datasets of varying hierarchical consistency. On evaluating PROFHiT over wide range of datasets, we observed 41-88% better performance in accuracy and significantly better calibration. Due to modeling the coherency over full distribution, we observed that PROFHiT can robustly provide reliable forecasts even if up to 10% of input time-series data is missing where other methods' performance severely degrade by over 70%.


Sequential Gibbs Posteriors with Applications to Principal Component Analysis

arXiv.org Machine Learning

Gibbs posteriors are proportional to a prior distribution multiplied by an exponentiated loss function, with a key tuning parameter weighting information in the loss relative to the prior and providing a control of posterior uncertainty. Gibbs posteriors provide a principled framework for likelihood-free Bayesian inference, but in many situations, including a single tuning parameter inevitably leads to poor uncertainty quantification. In particular, regardless of the value of the parameter, credible regions have far from the nominal frequentist coverage even in large samples. We propose a sequential extension to Gibbs posteriors to address this problem. We prove the proposed sequential posterior exhibits concentration and a Bernstein-von Mises theorem, which holds under easy to verify conditions in Euclidean space and on manifolds. As a byproduct, we obtain the first Bernstein-von Mises theorem for traditional likelihood-based Bayesian posteriors on manifolds. All methods are illustrated with an application to principal component analysis.


Model-agnostic variable importance for predictive uncertainty: an entropy-based approach

arXiv.org Machine Learning

In order to trust the predictions of a machine learning algorithm, it is necessary to understand the factors that contribute to those predictions. In the case of probabilistic and uncertainty-aware models, it is necessary to understand not only the reasons for the predictions themselves, but also the model's level of confidence in those predictions. In this paper, we show how existing methods in explainability can be extended to uncertainty-aware models and how such extensions can be used to understand the sources of uncertainty in a model's predictive distribution. In particular, by adapting permutation feature importance, partial dependence plots, and individual conditional expectation plots, we demonstrate that novel insights into model behaviour may be obtained and that these methods can be used to measure the impact of features on both the entropy of the predictive distribution and the log-likelihood of the ground truth labels under that distribution. With experiments using both synthetic and real-world data, we demonstrate the utility of these approaches in understanding both the sources of uncertainty and their impact on model performance.


STANLEY: Stochastic Gradient Anisotropic Langevin Dynamics for Learning Energy-Based Models

arXiv.org Machine Learning

We propose in this paper, STANLEY, a STochastic gradient ANisotropic LangEvin dYnamics, for sampling high dimensional data. With the growing efficacy and potential of Energy-Based modeling, also known as non-normalized probabilistic modeling, for modeling a generative process of different natures of high dimensional data observations, we present an end-to-end learning algorithm for Energy-Based models (EBM) with the purpose of improving the quality of the resulting sampled data points. While the unknown normalizing constant of EBMs makes the training procedure intractable, resorting to Markov Chain Monte Carlo (MCMC) is in general a viable option. Realizing what MCMC entails for the EBM training, we propose in this paper, a novel high dimensional sampling method, based on an anisotropic stepsize and a gradient-informed covariance matrix, embedded into a discretized Langevin diffusion. We motivate the necessity for an anisotropic update of the negative samples in the Markov Chain by the nonlinearity of the backbone of the EBM, here a Convolutional Neural Network. Our resulting method, namely STANLEY, is an optimization algorithm for training Energy-Based models via our newly introduced MCMC method. We provide a theoretical understanding of our sampling scheme by proving that the sampler leads to a geometrically uniformly ergodic Markov Chain. Several image generation experiments are provided in our paper to show the effectiveness of our method.


Causal Similarity-Based Hierarchical Bayesian Models

arXiv.org Machine Learning

The key challenge underlying machine learning is generalisation to new data. This work studies generalisation for datasets consisting of related tasks that may differ in causal mechanisms. For example, observational medical data for complex diseases suffers from heterogeneity in causal mechanisms of disease across patients, creating challenges for machine learning algorithms that need to generalise to new patients outside of the training dataset. Common approaches for learning supervised models with heterogeneous datasets include learning a global model for the entire dataset, learning local models for each tasks' data, or utilising hierarchical, meta-learning and multi-task learning approaches to learn how to generalise from data pooled across multiple tasks. In this paper we propose causal similarity-based hierarchical Bayesian models to improve generalisation to new tasks by learning how to pool data from training tasks with similar causal mechanisms. We apply this general modelling principle to Bayesian neural networks and compare a variety of methods for estimating causal task similarity (for both known and unknown causal models). We demonstrate the benefits of our approach and applicability to real world problems through a range of experiments on simulated and real data.


Neural Likelihood Approximation for Integer Valued Time Series Data

arXiv.org Machine Learning

Stochastic processes defined on integer valued state spaces are popular within the physical A combination of factors such as non-linear dynamics, and biological sciences. These models are partial observation and a complicated latent structure necessary for capturing the dynamics of small makes the inference of parameter posteriors a systems where the individual nature of the challenging problem. The likelihood is generally intractable populations cannot be ignored and stochastic and although methods that can sample from effects are important. The inference of the the exact posteriors exist--many based on simulation parameters of such models, from time series of the model itself--these can become computationally data, is difficult due to intractability of the prohibitive in many situations (Doucet et al., 2015; likelihood; current methods, based on simulations Sherlock et al., 2015). Observations of a system with of the underlying model, can be so computationally low noise are particularly challenging for simulation expensive as to be prohibitive.


EDGI: Equivariant Diffusion for Planning with Embodied Agents

arXiv.org Machine Learning

Embodied agents operate in a structured world, often solving tasks with spatial, temporal, and permutation symmetries. Most algorithms for planning and model-based reinforcement learning (MBRL) do not take this rich geometric structure into account, leading to sample inefficiency and poor generalization. We introduce the Equivariant Diffuser for Generating Interactions (EDGI), an algorithm for MBRL and planning that is equivariant with respect to the product of the spatial symmetry group SE(3), the discrete-time translation group Z, and the object permutation group Sn. EDGI follows the Diffuser framework (Janner et al., 2022) in treating both learning a world model and planning in it as a conditional generative modeling problem, training a diffusion model on an offline trajectory dataset. We introduce a new SE(3)xZxSn-equivariant diffusion model that supports multiple representations. We integrate this model in a planning loop, where conditioning and classifier guidance let us softly break the symmetry for specific tasks as needed. On object manipulation and navigation tasks, EDGI is substantially more sample efficient and generalizes better across the symmetry group than non-equivariant models.


Piecewise Deterministic Markov Processes for Bayesian Neural Networks

arXiv.org Machine Learning

Inference on modern Bayesian Neural Networks (BNNs) often relies on a variational inference treatment, imposing violated assumptions of independence and the form of the posterior. Traditional MCMC approaches avoid these assumptions at the cost of increased computation due to its incompatibility to subsampling of the likelihood. New Piecewise Deterministic Markov Process (PDMP) samplers permit subsampling, though introduce a model specific inhomogenous Poisson Process (IPPs) which is difficult to sample from. This work introduces a new generic and adaptive thinning scheme for sampling from these IPPs, and demonstrates how this approach can accelerate the application of PDMPs for inference in BNNs. Experimentation illustrates how inference with these methods is computationally feasible, can improve predictive accuracy, MCMC mixing performance, and provide informative uncertainty measurements when compared against other approximate inference schemes.


Constrained Reweighting of Distributions: an Optimal Transport Approach

arXiv.org Machine Learning

We commonly encounter the problem of identifying an optimally weight adjusted version of the empirical distribution of observed data, adhering to predefined constraints on the weights. Such constraints often manifest as restrictions on the moments, tail behaviour, shapes, number of modes, etc., of the resulting weight adjusted empirical distribution. In this article, we substantially enhance the flexibility of such methodology by introducing a nonparametrically imbued distributional constraints on the weights, and developing a general framework leveraging the maximum entropy principle and tools from optimal transport. The key idea is to ensure that the maximum entropy weight adjusted empirical distribution of the observed data is close to a pre-specified probability distribution in terms of the optimal transport metric while allowing for subtle departures. The versatility of the framework is demonstrated in the context of three disparate applications where data re-weighting is warranted to satisfy side constraints on the optimization problem at the heart of the statistical task: namely, portfolio allocation, semi-parametric inference for complex surveys, and ensuring algorithmic fairness in machine learning algorithms.