PLoM (Probabilistic Learning on Manifolds) is a method introduced in 2016 for handling small training datasets by projecting an It\^o equation from a stochastic dissipative Hamiltonian dynamical system, acting as the MCMC generator, for which the KDE-estimated probability measure with the training dataset is the invariant measure. PLoM performs a projection on a reduced-order vector basis related to the training dataset, using the diffusion maps (DMAPS) basis constructed with a time-independent isotropic kernel. In this paper, we propose a new ISDE projection vector basis built from a transient anisotropic kernel, providing an alternative to the DMAPS basis to improve statistical surrogates for stochastic manifolds with heterogeneous data. The construction ensures that for times near the initial time, the DMAPS basis coincides with the transient basis. For larger times, the differences between the two bases are characterized by the angle of their spanned vector subspaces. The optimal instant yielding the optimal transient basis is determined using an estimation of mutual information from Information Theory, which is normalized by the entropy estimation to account for the effects of the number of realizations used in the estimations. Consequently, this new vector basis better represents statistical dependencies in the learned probability measure for any dimension. Three applications with varying levels of statistical complexity and data heterogeneity validate the proposed theory, showing that the transient anisotropic kernel improves the learned probability measure.

While fiducial inference was widely considered a big blunder by R.A. Fisher, the goal he initially set --`inferring the uncertainty of model parameters on the basis of observations' -- has been continually pursued by many statisticians. To this end, we develop a new statistical inference method called extended Fiducial inference (EFI). The new method achieves the goal of fiducial inference by leveraging advanced statistical computing techniques while remaining scalable for big data. EFI involves jointly imputing random errors realized in observations using stochastic gradient Markov chain Monte Carlo and estimating the inverse function using a sparse deep neural network (DNN). The consistency of the sparse DNN estimator ensures that the uncertainty embedded in observations is properly propagated to model parameters through the estimated inverse function, thereby validating downstream statistical inference. Compared to frequentist and Bayesian methods, EFI offers significant advantages in parameter estimation and hypothesis testing. Specifically, EFI provides higher fidelity in parameter estimation, especially when outliers are present in the observations; and eliminates the need for theoretical reference distributions in hypothesis testing, thereby automating the statistical inference process. EFI also provides an innovative framework for semi-supervised learning.

Sequential Monte Carlo (SMC) methods are powerful tools for Bayesian inference but suffer from requiring many particles for accurate estimates, leading to high computational costs. We introduce persistent sampling (PS), an extension of SMC that mitigates this issue by allowing particles from previous iterations to persist. This generates a growing, weighted ensemble of particles distributed across iterations. In each iteration, PS utilizes multiple importance sampling and resampling from the mixture of all previous distributions to produce the next generation of particles. This addresses particle impoverishment and mode collapse, resulting in more accurate posterior approximations. Furthermore, this approach provides lower-variance marginal likelihood estimates for model comparison. Additionally, the persistent particles improve transition kernel adaptation for efficient exploration. Experiments on complex distributions show that PS consistently outperforms standard methods, achieving lower squared bias in posterior moment estimation and significantly reduced marginal likelihood errors, all at a lower computational cost. PS offers a robust, efficient, and scalable framework for Bayesian inference.

eBay partners with external vendors, which allows customers to freely select a vendor to complete their eBay experiences. However, vendor outages can hinder customer experiences. Consequently, eBay can disable a problematic vendor to prevent customer loss. Disabling the vendor too late risks losing customers willing to switch to other vendors, while disabling it too early risks losing those unwilling to switch. In this paper, we propose a data-driven solution to answer whether eBay should disable a problematic vendor and when to disable it. Our solution involves forecasting customer behavior. First, we use a multiplicative seasonality model to represent behavior if all vendors are fully functioning. Next, we use a Monte Carlo simulation to represent behavior if the problematic vendor remains enabled. Finally, we use a linear model to represent behavior if the vendor is disabled. By comparing these forecasts, we determine the optimal time for eBay to disable the problematic vendor.

Bayesian Inference with Markov Chain Monte Carlo requires efficient computation of the likelihood function. In some scientific applications, the likelihood must be computed by numerically solving a partial differential equation, which can be prohibitively expensive. We demonstrate that some such problems can be made tractable by amortizing the computation with a surrogate likelihood function implemented by a neural network. We show that this has two additional benefits: reducing noise in the likelihood evaluations and providing fast gradient calculations. In experiments, the approach is applied to a model of heliospheric transport of galactic cosmic rays, where it enables efficient sampling from the posterior of latent parameters in the Parker equation.

We consider the problem of Bayesian regression with trustworthy uncertainty quantification. We define that the uncertainty quantification is trustworthy if the ground truth can be captured by intervals dependent on the predictive distributions with a pre-specified probability. Furthermore, we propose, Trust-Bayes, a novel optimization framework for Bayesian meta learning which is cognizant of trustworthy uncertainty quantification without explicit assumptions on the prior model/distribution of the functions. We characterize the lower bounds of the probabilities of the ground truth being captured by the specified intervals and analyze the sample complexity with respect to the feasible probability for trustworthy uncertainty quantification. Monte Carlo simulation of a case study using Gaussian process regression is conducted for verification and comparison with the Meta-prior algorithm.

This paper describes a discrete state-space model -- and accompanying methods -- for generative modelling. This model generalises partially observed Markov decision processes to include paths as latent variables, rendering it suitable for active inference and learning in a dynamic setting. Specifically, we consider deep or hierarchical forms using the renormalisation group. The ensuing renormalising generative models (RGM) can be regarded as discrete homologues of deep convolutional neural networks or continuous state-space models in generalised coordinates of motion. By construction, these scale-invariant models can be used to learn compositionality over space and time, furnishing models of paths or orbits; i.e., events of increasing temporal depth and itinerancy. This technical note illustrates the automatic discovery, learning and deployment of RGMs using a series of applications. We start with image classification and then consider the compression and generation of movies and music. Finally, we apply the same variational principles to the learning of Atari-like games.

Models for categorical sequences typically assume exchangeable or first-order dependent sequence elements. These are common assumptions, for example, in models of computer malware traces and protein sequences. Although such simplifying assumptions lead to computational tractability, these models fail to capture long-range, complex dependence structures that may be harnessed for greater predictive power. To this end, a Bayesian modelling framework is proposed to parsimoniously capture rich dependence structures in categorical sequences, with memory efficiency suitable for real-time processing of data streams. Parsimonious Bayesian context trees are introduced as a form of variable-order Markov model with conjugate prior distributions. The novel framework requires fewer parameters than fixed-order Markov models by dropping redundant dependencies and clustering sequential contexts. Approximate inference on the context tree structure is performed via a computationally efficient model-based agglomerative clustering procedure. The proposed framework is tested on synthetic and real-world data examples, and it outperforms existing sequence models when fitted to real protein sequences and honeypot computer terminal sessions.

In this work, we present a sampling algorithm for single hidden layer neural networks. This algorithm is built upon a recursive series of Bayesian posteriors using a method we call Greedy Bayes. Sampling of the Bayesian posterior for neuron weight vectors $w$ of dimension $d$ is challenging because of its multimodality. Our algorithm to tackle this problem is based on a coupling of the posterior density for $w$ with an auxiliary random variable $\xi$. The resulting reverse conditional $w|\xi$ of neuron weights given auxiliary random variable is shown to be log concave. In the construction of the posterior distributions we provide some freedom in the choice of the prior. In particular, for Gaussian priors on $w$ with suitably small variance, the resulting marginal density of the auxiliary variable $\xi$ is proven to be strictly log concave for all dimensions $d$. For a uniform prior on the unit $\ell_1$ ball, evidence is given that the density of $\xi$ is again strictly log concave for sufficiently large $d$. The score of the marginal density of the auxiliary random variable $\xi$ is determined by an expectation over $w|\xi$ and thus can be computed by various rapidly mixing Markov Chain Monte Carlo methods. Moreover, the computation of the score of $\xi$ permits methods of sampling $\xi$ by a stochastic diffusion (Langevin dynamics) with drift function built from this score. With such dynamics, information-theoretic methods pioneered by Bakry and Emery show that accurate sampling of $\xi$ is obtained rapidly when its density is indeed strictly log-concave. After which, one more draw from $w|\xi$, produces neuron weights $w$ whose marginal distribution is from the desired posterior.

The Expectation Maximization (EM) algorithm has been a cent ral part of the statistician's toolbox since being formalised by [ 22 ] as an effective general computational solution to the marginal maximum likelihood problem. At that time the algor ithm had been proposed previously in numerous special contexts, including that of empirical Bayes [ 27 ]. Empirical Bayes methods have received considerable attention in the m odern machine learning literature, where they are widely used to specify hyper-paramete rs in high-dimensional models. In recent years there has been a great deal of interest within the Bayesian statistics and machine learning communities in the construction of gradie nt flows, especially Wasserstein gradient flows, which underlie Langevin Monte Carlo algorit hms. Some recent work has focussed on the intersection of empirical Bayes type method s and gradient flow-based algorithms. Our aim is to demonstrate here that some of the tools, particularly those emerging from optimal transport and Wasserstein geometry, which hav e been developed in the context of these modern computational methods provide a natura l approach to the analysis of the EM algorithm itself--and many of its approximations. S uch analysis is quite direct, requires limited further technical work and yields state-o f-the-art conclusions under conditions which are, if anything, weaker than those ordinaril y employed in the quantitative analysis of EM algorithms. 1 In this paper we utilize the connection between EM and a coord inate-wise minimization algorithm applied to the free energy functional identified b y [ 43 ] to provide non-asymptotic error bounds for EM algorithms under an extended form of the l og-Sobolev inequality. To do this, we extend an argument commonly used to understand Eu clidean coordinate descent algorithms by comparison with gradient descent via the desc ent lemma [ 9, 8, 10 ], together with recently developed results for using and understandin g gradients on the product of Euclidean and Wasserstein spaces [ 13 ].