Developing novel predictive models with complex biomedical information is challenging due to various idiosyncrasies related to heterogeneity, standardization or sparseness of the data. We previously introduced a person-centric ontology to organize information about individual patients, and a representation learning framework to extract person-centric knowledge graphs (PKGs) and to train Graph Neural Networks (GNNs). In this paper, we propose a systematic approach to examine the results of GNN models trained with both structured and unstructured information from the MIMIC-III dataset. Through ablation studies on different clinical, demographic, and social data, we show the robustness of this approach in identifying predictive features in PKGs for the task of readmission prediction.

In this paper, we investigate the use of probabilistic graphical models, specifically stochastic blockmodels, for the purpose of hierarchical entity clustering on knowledge graphs. These models, seldom used in the Semantic Web community, decompose a graph into a set of probability distributions. The parameters of these distributions are then inferred allowing for their subsequent sampling to generate a random graph. In a non-parametric setting, this allows for the induction of hierarchical clusterings without prior constraints on the hierarchy's structure. Specifically, this is achieved by the integration of the Nested Chinese Restaurant Process and the Stick Breaking Process into the generative model. In this regard, we propose a model leveraging such integration and derive a collapsed Gibbs sampling scheme for its inference. To aid in understanding, we describe the steps in this derivation and provide an implementation for the sampler. We evaluate our model on synthetic and real-world datasets and quantitatively compare against benchmark models. We further evaluate our results qualitatively and find that our model is capable of inducing coherent cluster hierarchies in small scale settings. The work presented in this paper provides the first step for the further application of stochastic blockmodels for knowledge graphs on a larger scale. We conclude the paper with potential avenues for future work on more scalable inference schemes.

The problem of career trajectory prediction (CTP) aims to predict one's future employer or job position. While several CTP methods have been developed for this problem, we posit that none of these methods (1) jointly considers the mutual ternary dependency between three key units (i.e., user, position, and company) of a career and (2) captures the characteristic shifts of key units in career over time, leading to an inaccurate understanding of the job movement patterns in the labor market. To address the above challenges, we propose a novel solution, named as CAPER, that solves the challenges via sophisticated temporal knowledge graph (TKG) modeling. It enables the utilization of a graph-structured knowledge base with rich expressiveness, effectively preserving the changes in job movement patterns. Furthermore, we devise an extrapolated career reasoning task on TKG for a realistic evaluation. The experiments on a real-world career trajectory dataset demonstrate that CAPER consistently and significantly outperforms four baselines, two recent TKG reasoning methods, and five state-of-the-art CTP methods in predicting one's future companies and positions-i.e., on average, yielding 6.80% and 34.58% more accurate predictions, respectively.

Numerous methods and pipelines have recently emerged for the automatic extraction of knowledge graphs from documents such as scientific publications and patents. However, adapting these methods to incorporate alternative text sources like micro-blogging posts and news has proven challenging as they struggle to model open-domain entities and relations, typically found in these sources. In this paper, we propose an enhanced information extraction pipeline tailored to the extraction of a knowledge graph comprising open-domain entities from micro-blogging posts on social media platforms. Our pipeline leverages dependency parsing and classifies entity relations in an unsupervised manner through hierarchical clustering over word embeddings. We provide a use case on extracting semantic triples from a corpus of 100 thousand tweets about digital transformation and publicly release the generated knowledge graph. On the same dataset, we conduct two experimental evaluations, showing that the system produces triples with precision over 95% and outperforms similar pipelines of around 5% in terms of precision, while generating a comparatively higher number of triples.

Multi-modal knowledge graphs (MMKGs), which ground various non-symbolic data (e.g., images and videos) into symbols, have attracted attention as resources enabling knowledge processing and machine learning across modalities. However, the construction of MMKGs for videos consisting of multiple events, such as daily activities, is still in the early stages. In this paper, we construct an MMKG based on synchronized multi-view simulated videos of daily activities. Besides representing the content of daily life videos as event-centric knowledge, our MMKG also includes frame-by-frame fine-grained changes, such as bounding boxes within video frames. In addition, we provide support tools for querying our MMKG. As an application example, we demonstrate that our MMKG facilitates benchmarking vision-language models by providing the necessary vision-language datasets for a tailored task.

Multi-hop query answering over a Knowledge Graph (KG) involves traversing one or more hops from the start node to answer a query. Path-based and logic-based methods are state-of-the-art for multi-hop question answering. The former is used in link prediction tasks. The latter is for answering complex logical queries. The logical multi-hop querying technique embeds the KG and queries in the same embedding space. The existing work incorporates First Order Logic (FOL) operators, such as conjunction ($\wedge$), disjunction ($\vee$), and negation ($\neg$), in queries. Though current models have most of the building blocks to execute the FOL queries, they cannot use the dense information of multi-modal entities in the case of Multi-Modal Knowledge Graphs (MMKGs). We propose RConE, an embedding method to capture the multi-modal information needed to answer a query. The model first shortlists candidate (multi-modal) entities containing the answer. It then finds the solution (sub-entities) within those entities. Several existing works tackle path-based question-answering in MMKGs. However, to our knowledge, we are the first to introduce logical constructs in querying MMKGs and to answer queries that involve sub-entities of multi-modal entities as the answer. Extensive evaluation of four publicly available MMKGs indicates that RConE outperforms the current state-of-the-art.

In process mining, a log exploration step allows making sense of the event traces; e.g., identifying event patterns and illogical traces, and gaining insight into their variability. To support expressive log exploration, the event log can be converted into a Knowledge Graph (KG), which can then be queried using general-purpose languages. We explore the creation of semantic KG using the Resource Description Framework (RDF) as a data model, combined with the general-purpose Notation3 (N3) rule language for querying. We show how typical trace querying constraints, inspired by the state of the art, can be implemented in N3. We convert case- and object-centric event logs into a trace-based semantic KG; OCEL2 logs are hereby "flattened" into traces based on object paths through the KG. This solution offers (a) expressivity, as queries can instantiate constraints in multiple ways and arbitrarily constrain attributes and relations (e.g., actors, resources); (b) flexibility, as OCEL2 event logs can be serialized as traces in arbitrary ways based on the KG; and (c) extensibility, as others can extend our library by leveraging the same implementation patterns.

Recent advancements in artificial intelligence have significantly improved the automatic generation of radiology reports. However, existing evaluation methods fail to reveal the models' understanding of radiological images and their capacity to achieve human-level granularity in descriptions. To bridge this gap, we introduce a system, named ReXKG, which extracts structured information from processed reports to construct a comprehensive radiology knowledge graph. We then propose three metrics to evaluate the similarity of nodes (ReXKG-NSC), distribution of edges (ReXKG-AMS), and coverage of subgraphs (ReXKG-SCS) across various knowledge graphs. We conduct an in-depth comparative analysis of AI-generated and human-written radiology reports, assessing the performance of both specialist and generalist models. Our study provides a deeper understanding of the capabilities and limitations of current AI models in radiology report generation, offering valuable insights for improving model performance and clinical applicability.

Knowledge graph embeddings (KGE) apply machine learning methods on knowledge graphs (KGs) to provide non-classical reasoning capabilities based on similarities and analogies. The learned KG embeddings are typically used to answer queries by ranking all potential answers, but rankings often lack a meaningful probabilistic interpretation - lower-ranked answers do not necessarily have a lower probability of being true. This limitation makes it difficult to distinguish plausible from implausible answers, posing challenges for the application of KGE methods in high-stakes domains like medicine. We address this issue by applying the theory of conformal prediction that allows generating answer sets, which contain the correct answer with probabilistic guarantees. We explain how conformal prediction can be used to generate such answer sets for link prediction tasks. Our empirical evaluation on four benchmark datasets using six representative KGE methods validates that the generated answer sets satisfy the probabilistic guarantees given by the theory of conformal prediction. We also demonstrate that the generated answer sets often have a sensible size and that the size adapts well with respect to the difficulty of the query.

Knowledge Graphs (KGs) serving as semantic networks, prove highly effective in managing complex interconnected data in different domains, by offering a unified, contextualized, and structured representation with flexibility that allows for easy adaptation to evolving knowledge. Processing complex Human Resources (HR) data, KGs can help in different HR functions like recruitment, job matching, identifying learning gaps, and enhancing employee retention. Despite their potential, limited efforts have been made to implement practical HR knowledge graphs. This study addresses this gap by presenting a framework for effectively developing HR knowledge graphs from documents using Large Language Models. The resulting KG can be used for a variety of downstream tasks, including job matching, identifying employee skill gaps, and many more. In this work, we showcase instances where HR KGs prove instrumental in precise job matching, yielding advantages for both employers and employees. Empirical evidence from experiments with information propagation in KGs and Graph Neural Nets, along with case studies underscores the effectiveness of KGs in tasks such as job and employee recommendations and job area classification. Code and data are available at : https://github.com/azminewasi/HRGraph