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 Semantic Networks


Scientific Knowledge Graph

#artificialintelligence

In the last decade, we experienced an urgent need for a flexible, context-sensitive, fine-grained, and machine-actionable representation of scholarly knowledge and corresponding infrastructures for knowledge curation, publishing and processing. Such technical infrastructures are becoming increasingly popular in representing scholarly knowledge as structured, interlinked, and semantically rich Scientific Knowledge Graphs (SKG). Knowledge graphs are large networks of entities and relationships, usually expressed in W3C standards such as OWL and RDF. SKGs focus on the scholarly domain and describe the actors (e.g., authors, organizations), the documents (e.g., publications, patents), and the research knowledge (e.g., research topics, tasks, technologies) in this space as well as their reciprocal relationships. These resources provide substantial benefits to researchers, companies, and policymakers by powering several data-driven services for navigating, analysing, and making sense of research dynamics.


Error detection in Knowledge Graphs: Path Ranking, Embeddings or both?

arXiv.org Artificial Intelligence

This paper attempts to compare and combine different approaches for de-tecting errors in Knowledge Graphs. Knowledge Graphs constitute a mainstreamapproach for the representation of relational information on big heterogeneous data,however, they may contain a big amount of imputed noise when constructed auto-matically. To address this problem, different error detection methodologies have beenproposed, mainly focusing on path ranking and representation learning. This workpresents various mainstream approaches and proposes a novel hybrid and modularmethodology for the task. We compare these methods on two benchmarks and one real-world biomedical publications dataset, showcasing the potential of our approach anddrawing insights regarding the state-of-art in error detection in Knowledge Graphs


Entity Context and Relational Paths for Knowledge Graph Completion

arXiv.org Machine Learning

Knowledge graph completion aims to predict missing relations between entities in a knowledge graph. While many different methods have been proposed, there is a lack of a unifying framework that would lead to state-of-the-art results. Here we develop PathCon, a knowledge graph completion method that harnesses four novel insights to outperform existing methods. PathCon predicts relations between a pair of entities by: (1) Considering the Relational Context of each entity by capturing the relation types adjacent to the entity and modeled through a novel edge-based message passing scheme; (2) Considering the Relational Paths capturing all paths between the two entities; And, (3) adaptively integrating the Relational Context and Relational Path through a learnable attention mechanism. Importantly, (4) in contrast to conventional node-based representations, PathCon represents context and path only using the relation types, which makes it applicable in an inductive setting. Experimental results on knowledge graph benchmarks as well as our newly proposed dataset show that PathCon outperforms state-of-the-art knowledge graph completion methods by a large margin. Finally, PathCon is able to provide interpretable explanations by identifying relations that provide the context and paths that are important for a given predicted relation.


Human memory search as a random walk in a semantic network

Neural Information Processing Systems

The human mind has a remarkable ability to store a vast amount of information in memory, and an even more remarkable ability to retrieve these experiences when needed. Understanding the representations and algorithms that underlie human memory search could potentially be useful in other information retrieval settings, including internet search. Psychological studies have revealed clear regularities in how people search their memory, with clusters of semantically related items tending to be retrieved together. These findings have recently been taken as evidence that human memory search is similar to animals foraging for food in patchy environments, with people making a rational decision to switch away from a cluster of related information as it becomes depleted. We demonstrate that the results that were taken as evidence for this account also emerge from a random walk on a semantic network, much like the random web surfer model used in internet search engines.


Hash Embeddings for Efficient Word Representations

Neural Information Processing Systems

A hash embedding may be seen as an interpolation between a standard word embedding and a word embedding created using a random hash function (the hashing trick). In hash embeddings each token is represented by $k$ $d$-dimensional embeddings vectors and one $k$ dimensional weight vector. The final $d$ dimensional representation of the token is the product of the two. Rather than fitting the embedding vectors for each token these are selected by the hashing trick from a shared pool of $B$ embedding vectors. Our experiments show that hash embeddings can easily deal with huge vocabularies consisting of millions tokens.


SimplE Embedding for Link Prediction in Knowledge Graphs

Neural Information Processing Systems

Knowledge graphs contain knowledge about the world and provide a structured representation of this knowledge. Current knowledge graphs contain only a small subset of what is true in the world. Link prediction approaches aim at predicting new links for a knowledge graph given the existing links among the entities. Tensor factorization approaches have proved promising for such link prediction problems. Proposed in 1927, Canonical Polyadic (CP) decomposition is among the first tensor factorization approaches.


Embedding Logical Queries on Knowledge Graphs

Neural Information Processing Systems

Learning low-dimensional embeddings of knowledge graphs is a powerful approach used to predict unobserved or missing edges between entities. However, an open challenge in this area is developing techniques that can go beyond simple edge prediction and handle more complex logical queries, which might involve multiple unobserved edges, entities, and variables. For instance, given an incomplete biological knowledge graph, we might want to predict "em what drugs are likely to target proteins involved with both diseases X and Y?" -- a query that requires reasoning about all possible proteins that might interact with diseases X and Y. Here we introduce a framework to efficiently make predictions about conjunctive logical queries -- a flexible but tractable subset of first-order logic -- on incomplete knowledge graphs. In our approach, we embed graph nodes in a low-dimensional space and represent logical operators as learned geometric operations (e.g., translation, rotation) in this embedding space.


An Autoencoder Approach to Learning Bilingual Word Representations

Neural Information Processing Systems

Cross-language learning allows us to use training data from one language to build models for a different language. Many approaches to bilingual learning require that we have word-level alignment of sentences from parallel corpora. In this work we explore the use of autoencoder-based methods for cross-language learning of vectorial word representations that are aligned between two languages, while not relying on word-level alignments. We show that by simply learning to reconstruct the bag-of-words representations of aligned sentences, within and between languages, we can in fact learn high-quality representations and do without word alignments. We empirically investigate the success of our approach on the problem of cross-language text classification, where a classifier trained on a given language (e.g., English) must learn to generalize to a different language (e.g., German).


FRAGE: Frequency-Agnostic Word Representation

Neural Information Processing Systems

Continuous word representation (aka word embedding) is a basic building block in many neural network-based models used in natural language processing tasks. Although it is widely accepted that words with similar semantics should be close to each other in the embedding space, we find that word embeddings learned in several tasks are biased towards word frequency: the embeddings of high-frequency and low-frequency words lie in different subregions of the embedding space, and the embedding of a rare word and a popular word can be far from each other even if they are semantically similar. This makes learned word embeddings ineffective, especially for rare words, and consequently limits the performance of these neural network models. In order to mitigate the issue, in this paper, we propose a neat, simple yet effective adversarial training method to blur the boundary between the embeddings of high-frequency words and low-frequency words. We conducted comprehensive studies on ten datasets across four natural language processing tasks, including word similarity, language modeling, machine translation and text classification.


Optimization of Retrieval Algorithms on Large Scale Knowledge Graphs

arXiv.org Artificial Intelligence

Knowledge graphs have been shown to play an important role in recent knowledge mining and discovery, for example in the field of life sciences or bioinformatics. Although a lot of research has been done on the field of query optimization, query transformation and of course in storing and retrieving large scale knowledge graphs the field of algorithmic optimization is still a major challenge and a vital factor in using graph databases. Few researchers have addressed the problem of optimizing algorithms on large scale labeled property graphs. Here, we present two optimization approaches and compare them with a naive approach of directly querying the graph database. The aim of our work is to determine limiting factors of graph databases like Neo4j and we describe a novel solution to tackle these challenges. For this, we suggest a classification schema to differ between the complexity of a problem on a graph database. We evaluate our optimization approaches on a test system containing a knowledge graph derived biomedical publication data enriched with text mining data. This dense graph has more than 71M nodes and 850M relationships. The results are very encouraging and - depending on the problem - we were able to show a speedup of a factor between 44 and 3839.