Ontologies
Learning Permutation-Invariant Embeddings for Description Logic Concepts
Demir, Caglar, Ngomo, Axel-Cyrille Ngonga
Concept learning deals with learning description logic concepts from a background knowledge and input examples. The goal is to learn a concept that covers all positive examples, while not covering any negative examples. This non-trivial task is often formulated as a search problem within an infinite quasi-ordered concept space. Although state-of-the-art models have been successfully applied to tackle this problem, their large-scale applications have been severely hindered due to their excessive exploration incurring impractical runtimes. Here, we propose a remedy for this limitation. We reformulate the learning problem as a multi-label classification problem and propose a neural embedding model (NERO) that learns permutation-invariant embeddings for sets of examples tailored towards predicting $F_1$ scores of pre-selected description logic concepts. By ranking such concepts in descending order of predicted scores, a possible goal concept can be detected within few retrieval operations, i.e., no excessive exploration. Importantly, top-ranked concepts can be used to start the search procedure of state-of-the-art symbolic models in multiple advantageous regions of a concept space, rather than starting it in the most general concept $\top$. Our experiments on 5 benchmark datasets with 770 learning problems firmly suggest that NERO significantly (p-value <1%) outperforms the state-of-the-art models in terms of $F_1$ score, the number of explored concepts, and the total runtime. We provide an open-source implementation of our approach.
Converting the Suggested Upper Merged Ontology to Typed First-order Form
We describe the translation of the Suggested Upper Merged Ontology (SUMO) to Typed First-order Form (TFF) with level 0 polymorphism. Building on our prior work to create a TPTP FOF translation of SUMO for use in the E and Vampire theorem provers, we detail the transformations required to handle an explicitly typed logic, and express SUMO's type hierarchy for numbers in a manner consistent with its intended semantics and the three numerical classes allowed in TFF. We provide description of the open source code and an example proof in Vampire on the resulting theory.
That's All Folks: a KG of Values as Commonsense Social Norms and Behaviors
De Giorgis, Stefano, Gangemi, Aldo
Values, as intended in ethics, determine the shape and validity of moral and social norms, grounding our everyday individual and community behavior on commonsense knowledge. Formalising latent moral content in human interaction is an appealing perspective that would enable a deeper understanding of both social dynamics and individual cognitive and behavioral dimension. To tackle this problem, several theoretical frameworks offer different values models, and organize them into different taxonomies. The problem of the most used theories is that they adopt a cultural-independent perspective while many entities that are considered "values" are grounded in commonsense knowledge and expressed in everyday life interaction. We propose here two ontological modules, FOLK, an ontology for values intended in their broad sense, and That's All Folks, a module for lexical and factual folk value triggers, whose purpose is to complement the main theories, providing a method for identifying the values that are not contemplated by the major value theories, but which nonetheless play a key role in daily human interactions, and shape social structures, cultural biases, and personal beliefs. The resource is tested via performing automatic detection of values from text with a frame-based approach.
PN-OWL: A Two Stage Algorithm to Learn Fuzzy Concept Inclusions from OWL Ontologies
Cardillo, Franco Alberto, Debole, Franca, Straccia, Umberto
OWL ontologies are a quite popular way to describe structured knowledge in terms of classes, relations among classes and class instances. In this paper, given a target class T of an OWL ontology, with a focus on ontologies with real- and boolean-valued data properties, we address the problem of learning graded fuzzy concept inclusion axioms with the aim of describing enough conditions for being an individual classified as instance of the class T. To do so, we present PN-OWL that is a two-stage learning algorithm made of a P-stage and an N-stage. Roughly, in the P-stage the algorithm tries to cover as many positive examples as possible (increase recall), without compromising too much precision, while in the N-stage, the algorithm tries to rule out as many false positives, covered by the P-stage, as possible. PN-OWL then aggregates the fuzzy inclusion axioms learnt at the P-stage and the N-stage by combining them via aggregation functions to allow for a final decision whether an individual is instance of T or not. We also illustrate its effectiveness by means of an experimentation. An interesting feature is that fuzzy datatypes are built automatically, the learnt fuzzy concept inclusions can be represented directly into Fuzzy OWL 2 and, thus, any Fuzzy OWL 2 reasoner can then be used to automatically determine/classify (and to which degree) whether an individual belongs to the target class T or not.
Towards Ranking Schemas by Focus
Fumagalli, Mattia, Shi, Daqian, Giunchiglia, Fausto
The main goal of this paper is to evaluate knowledge base schemas, modeled as a set of entity types, each such type being associated with a set of properties, according to their focus. We intuitively model the notion of focus as ''the state or quality of being relevant in storing and retrieving information''. This definition of focus is adapted from the notion of ''categorization purpose'', as first defined in cognitive psychology, thus giving us a high level of understandability on the side of users. In turn, this notion is formalized based on a set of knowledge metrics that, for any given focus, rank knowledge base schemas according to their quality. We apply the proposed methodology to more than 200 state-of-the-art knowledge base schemas. The experimental results show the utility of our approach
Tractable Diversity: Scalable Multiperspective Ontology Management via Standpoint EL
รlvarez, Lucรญa Gรณmez, Rudolph, Sebastian, Strass, Hannes
The tractability of the lightweight description logic EL has allowed for the construction of large and widely used ontologies that support semantic interoperability. However, comprehensive domains with a broad user base are often at odds with strong axiomatisations otherwise useful for inferencing, since these are usually context-dependent and subject to diverging perspectives. In this paper we introduce Standpoint EL, a multi-modal extension of EL that allows for the integrated representation of domain knowledge relative to diverse, possibly conflicting standpoints (or contexts), which can be hierarchically organised and put in relation to each other. We establish that Standpoint EL still exhibits EL's favourable PTime standard reasoning, whereas introducing additional features like empty standpoints, rigid roles, and nominals makes standard reasoning tasks intractable.
A Biomedical Knowledge Graph for Biomarker Discovery in Cancer
Karim, Md. Rezaul, Comet, Lina Molinas, Beyan, Oya, Rebholz-Schuhmann, Dietrich, Decker, Stefan
Structured and unstructured data and facts about drugs, genes, protein, viruses, and their mechanism are spread across a huge number of scientific articles. These articles are a large-scale knowledge source and can have a huge impact on disseminating knowledge about the mechanisms of certain biological processes. A domain-specific knowledge graph~(KG) is an explicit conceptualization of a specific subject-matter domain represented w.r.t semantically interrelated entities and relations. A KG can be constructed by integrating such facts and data and be used for data integration, exploration, and federated queries. However, exploration and querying large-scale KGs is tedious for certain groups of users due to a lack of knowledge about underlying data assets or semantic technologies. Such a KG will not only allow deducing new knowledge and question answering(QA) but also allows domain experts to explore. Since cross-disciplinary explanations are important for accurate diagnosis, it is important to query the KG to provide interactive explanations about learned biomarkers. Inspired by these, we construct a domain-specific KG, particularly for cancer-specific biomarker discovery. The KG is constructed by integrating cancer-related knowledge and facts from multiple sources. First, we construct a domain-specific ontology, which we call OncoNet Ontology (ONO). The ONO ontology is developed to enable semantic reasoning for verification of the predictions for relations between diseases and genes. The KG is then developed and enriched by harmonizing the ONO, additional metadata schemas, ontologies, controlled vocabularies, and additional concepts from external sources using a BERT-based information extraction method. BioBERT and SciBERT are finetuned with the selected articles crawled from PubMed. We listed down some queries and some examples of QA and deducing knowledge based on the KG.
UML: A Universal Monolingual Output Layer for Multilingual ASR
Zhang, Chao, Li, Bo, Sainath, Tara N., Strohman, Trevor, Chang, Shuo-yiin
Word-piece models (WPMs) are commonly used subword units in state-of-the-art end-to-end automatic speech recognition (ASR) systems. For multilingual ASR, due to the differences in written scripts across languages, multilingual WPMs bring the challenges of having overly large output layers and scaling to more languages. In this work, we propose a universal monolingual output layer (UML) to address such problems. Instead of one output node for only one WPM, UML re-associates each output node with multiple WPMs, one for each language, and results in a smaller monolingual output layer shared across languages. Consequently, the UML enables to switch in the interpretation of each output node depending on the language of the input speech. Experimental results on an 11-language voice search task demonstrated the feasibility of using UML for high-quality and high-efficiency multilingual streaming ASR.
The notion of role in conceptual modelling
Reynaud, Chantal, Aussenac-Gilles, Nathalie, Tchounikine, Pierre, Trichet, Franckie
First of all, we present how the relationship between problem solving methods and domain models is tackled in different approaches. We concentrate on how they cope with this issue in the knowledge engineering process. Secondly, we introduce several properties which can be used to analyse, characterise and define the notion of role. We evaluate and compare the works exposed previously following these dimensions. This analysis suggests some developments to better exploit the relationship between reasoning and domain knowledge.
Cognitive Architecture for Decision-Making Based on Brain Principles Programming (in Russian)
Kolonin, Anton, Kurpatov, Andrey, Molchanov, Artem, Averyanov, Gennadiy
We describe a cognitive architecture intended to solve a wide range of problems based on the five identified principles of brain activity, with their implementation in three subsystems: logical-probabilistic inference, probabilistic formal concepts, and functional systems theory. Building an architecture involves the implementation of a task-driven approach that allows defining the target functions of applied applications as tasks formulated in terms of the operating environment corresponding to the task, expressed in the applied ontology. We provide a basic ontology for a number of practical applications as well as for the subject domain ontologies based upon it, describe the proposed architecture, and give possible examples of the execution of these applications in this architecture.