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 Ontologies


Automating Transfer of Robot Task Plans using Functorial Data Migrations

arXiv.org Artificial Intelligence

This paper introduces a novel approach to ontology-based robot plan transfer using functorial data migrations from category theory. Functors provide structured maps between domain types and predicates which can be used to transfer plans from a source domain to a target domain without the need for replanning. Unlike methods that create models for transferring specific plans, our approach can be applied to any plan within a given domain. We demonstrate this approach by transferring a task plan from the canonical Blocksworld domain to one compatible with the AI2-THOR Kitchen environment. In addition, we discuss practical applications that may enhance the adaptability of robotic task planning in general.


Towards Robust Training Datasets for Machine Learning with Ontologies: A Case Study for Emergency Road Vehicle Detection

arXiv.org Artificial Intelligence

Countless domains rely on Machine Learning (ML) models, including safety-critical domains, such as autonomous driving, which this paper focuses on. While the black box nature of ML is simply a nuisance in some domains, in safety-critical domains, this makes ML models difficult to trust. To fully utilize ML models in safety-critical domains, it would be beneficial to have a method to improve trust in model robustness and accuracy without human experts checking each decision. This research proposes a method to increase trust in ML models used in safety-critical domains by ensuring the robustness and completeness of the model's training dataset. Because ML models embody what they are trained with, ensuring the completeness of training datasets can help to increase the trust in the training of ML models. To this end, this paper proposes the use of a domain ontology and an image quality characteristic ontology to validate the domain completeness and image quality robustness of a training dataset. This research also presents an experiment as a proof of concept for this method, where ontologies are built for the emergency road vehicle domain.


A review of feature selection strategies utilizing graph data structures and knowledge graphs

arXiv.org Machine Learning

Feature selection in Knowledge Graphs (KGs) are increasingly utilized in diverse domains, including biomedical research, Natural Language Processing (NLP), and personalized recommendation systems. This paper delves into the methodologies for feature selection within KGs, emphasizing their roles in enhancing machine learning (ML) model efficacy, hypothesis generation, and interpretability. Through this comprehensive review, we aim to catalyze further innovation in feature selection for KGs, paving the way for more insightful, efficient, and interpretable analytical models across various domains. Our exploration reveals the critical importance of scalability, accuracy, and interpretability in feature selection techniques, advocating for the integration of domain knowledge to refine the selection process. We highlight the burgeoning potential of multi-objective optimization and interdisciplinary collaboration in advancing KG feature selection, underscoring the transformative impact of such methodologies on precision medicine, among other fields. The paper concludes by charting future directions, including the development of scalable, dynamic feature selection algorithms and the integration of explainable AI principles to foster transparency and trust in KG-driven models.


Infusing clinical knowledge into tokenisers for language models

arXiv.org Artificial Intelligence

This study introduces a novel knowledge enhanced tokenisation mechanism, K-Tokeniser, for clinical text processing. Technically, at initialisation stage, K-Tokeniser populates global representations of tokens based on semantic types of domain concepts (such as drugs or diseases) from either a domain ontology like Unified Medical Language System or the training data of the task related corpus. At training or inference stage, sentence level localised context will be utilised for choosing the optimal global token representation to realise the semantic-based tokenisation. To avoid pretraining using the new tokeniser, an embedding initialisation approach is proposed to generate representations for new tokens. Using three transformer-based language models, a comprehensive set of experiments are conducted on four real-world datasets for evaluating K-Tokeniser in a wide range of clinical text analytics tasks including clinical concept and relation extraction, automated clinical coding, clinical phenotype identification, and clinical research article classification. Overall, our models demonstrate consistent improvements over their counterparts in all tasks. In particular, substantial improvements are observed in the automated clinical coding task with 13\% increase on Micro $F_1$ score. Furthermore, K-Tokeniser also shows significant capacities in facilitating quicker converge of language models. Specifically, using K-Tokeniser, the language models would only require 50\% of the training data to achieve the best performance of the baseline tokeniser using all training data in the concept extraction task and less than 20\% of the data for the automated coding task. It is worth mentioning that all these improvements require no pre-training process, making the approach generalisable.


BTS: Building Timeseries Dataset: Empowering Large-Scale Building Analytics

arXiv.org Artificial Intelligence

Buildings play a crucial role in human well-being, influencing occupant comfort, health, and safety. Additionally, they contribute significantly to global energy consumption, accounting for one-third of total energy usage, and carbon emissions. Optimizing building performance presents a vital opportunity to combat climate change and promote human flourishing. However, research in building analytics has been hampered by the lack of accessible, available, and comprehensive real-world datasets on multiple building operations. In this paper, we introduce the Building TimeSeries (BTS) dataset. Our dataset covers three buildings over a three-year period, comprising more than ten thousand timeseries data points with hundreds of unique ontologies. Moreover, the metadata is standardized using the Brick schema. To demonstrate the utility of this dataset, we performed benchmarks on two tasks: timeseries ontology classification and zero-shot forecasting. These tasks represent an essential initial step in addressing challenges related to interoperability in building analytics.


A Step Towards a Universal Method for Modeling and Implementing Cross-Organizational Business Processes

arXiv.org Artificial Intelligence

The widely adopted Business Process Model and Notation (BPMN) is a cornerstone of industry standards for business process modeling. However, its ambiguous execution semantics often result in inconsistent interpretations, depending on the software used for implementation. In response, the Process Specification Language (PASS) provides formally defined semantics to overcome these interpretational challenges. Despite its clear advantages, PASS has not reached the same level of industry penetration as BPMN. This feasibility study proposes using PASS as an intermediary framework to translate and execute BPMN models. It describes the development of a prototype translator that converts specific BPMN elements into a format compatible with PASS. These models are then transformed into source code and executed in a bespoke workflow environment, marking a departure from traditional BPMN implementations. Our findings suggest that integrating PASS enhances compatibility across different modeling and execution tools and offers a more robust methodology for implementing business processes across organizations. This study lays the groundwork for more accurate and unified business process model executions, potentially transforming industry standards for process modeling and execution.


Ontology Embedding: A Survey of Methods, Applications and Resources

arXiv.org Artificial Intelligence

Ontologies are widely used for representing domain knowledge and meta data, playing an increasingly important role in Information Systems, the Semantic Web, Bioinformatics and many other domains. However, logical reasoning that ontologies can directly support are quite limited in learning, approximation and prediction. One straightforward solution is to integrate statistical analysis and machine learning. To this end, automatically learning vector representation for knowledge of an ontology i.e., ontology embedding has been widely investigated in recent years. Numerous papers have been published on ontology embedding, but a lack of systematic reviews hinders researchers from gaining a comprehensive understanding of this field. To bridge this gap, we write this survey paper, which first introduces different kinds of semantics of ontologies, and formally defines ontology embedding from the perspectives of both mathematics and machine learning, as well as its property of faithfulness. Based on this, it systematically categorises and analyses a relatively complete set of over 80 papers, according to the ontologies and semantics that they aim at, and their technical solutions including geometric modeling, sequence modeling and graph propagation. This survey also introduces the applications of ontology embedding in ontology engineering, machine learning augmentation and life sciences, presents a new library mOWL, and discusses the challenges and future directions.


A Document-based Knowledge Discovery with Microservices Architecture

arXiv.org Artificial Intelligence

The first step towards digitalization within organizations lies in digitization - the conversion of analog data into digitally stored data. This basic step is the prerequisite for all following activities like the digitalization of processes or the servitization of products or offerings. However, digitization itself often leads to 'data-rich' but 'knowledge-poor' material. Knowledge discovery and knowledge extraction as approaches try to increase the usefulness of digitized data. In this paper, we point out the key challenges in the context of knowledge discovery and present an approach to addressing these using a microservices architecture. Our solution led to a conceptual design focusing on keyword extraction, similarity calculation of documents, database queries in natural language, and programming language independent provision of the extracted information. In addition, the conceptual design provides referential design guidelines for integrating processes and applications for semi-automatic learning, editing, and visualization of ontologies. The concept also uses a microservices architecture to address non-functional requirements, such as scalability and resilience. The evaluation of the specified requirements is performed using a demonstrator that implements the concept. Furthermore, this modern approach is used in the German patent office in an extended version.


Can Social Ontological Knowledge Representations be Measured Using Machine Learning?

arXiv.org Artificial Intelligence

Personal Social Ontology (PSO), it is proposed, is how an individual perceives the ontological properties of terms. For example, an absolute fatalist would arguably use terms that remove any form of agency from a person. Such fatalism has the impact of ontologically defining acts such as winning, victory and success in a manner that is contrary to how a non-fatalist would ontologically define them. While both the said fatalist and non-fatalist would agree on the dictionary definition of these terms, they would differ on specifically how they can be brought about. This difference between the two individuals can be induced from their usage of these terms, i.e., the co-occurrence of these terms with other terms. As such a quantification of this such co-occurrence offers an avenue to characterise the social ontological views of the speaker. In this paper we ask, what specific term co-occurrence should be measured in order to obtain a valid and reliable psychometric measure of a persons social ontology? We consider the social psychology and social neuroscience literature to arrive at a list of social concepts that can be considered principal features of personal social ontology, and then propose an NLP pipeline to capture the articulation of these terms in language.


Toward a Method to Generate Capability Ontologies from Natural Language Descriptions

arXiv.org Artificial Intelligence

To achieve a flexible and adaptable system, capability ontologies are increasingly leveraged to describe functions in a machine-interpretable way. However, modeling such complex ontological descriptions is still a manual and error-prone task that requires a significant amount of effort and ontology expertise. This contribution presents an innovative method to automate capability ontology modeling using Large Language Models (LLMs), which have proven to be well suited for such tasks. Our approach requires only a natural language description of a capability, which is then automatically inserted into a predefined prompt using a few-shot prompting technique. After prompting an LLM, the resulting capability ontology is automatically verified through various steps in a loop with the LLM to check the overall correctness of the capability ontology. First, a syntax check is performed, then a check for contradictions, and finally a check for hallucinations and missing ontology elements. Our method greatly reduces manual effort, as only the initial natural language description and a final human review and possible correction are necessary, thereby streamlining the capability ontology generation process.