Over the past few years, we have seen the emergence of large knowledge graphs combining information from multiple sources. Sometimes, this information is provided in the form of assertions about other assertions, defining contexts where assertions are valid. A recent extension to RDF which admits statements over statements, called RDF-star, is in revision to become a W3C standard. However, there is no proposal for a semantics of these RDF-star statements nor a built-in facility to operate over them. In this paper, we propose a query language for epistemic RDF-star metadata based on a four-valued logic, called eSPARQL. Our proposed query language extends SPARQL-star, the query language for RDF-star, with a new type of FROM clause to facilitate operating with multiple and sometimes conflicting beliefs. We show that the proposed query language can express four use case queries, including the following features: (i) querying the belief of an individual, (ii) the aggregating of beliefs, (iii) querying who is conflicting with somebody, and (iv) beliefs about beliefs (i.e., nesting of beliefs).

State-of-the-art task-oriented dialogue systems typically rely on task-specific ontologies for fulfilling user queries. The majority of task-oriented dialogue data, such as customer service recordings, comes without ontology and annotation. Such ontologies are normally built manually, limiting the application of specialised systems. Dialogue ontology construction is an approach for automating that process and typically consists of two steps: term extraction and relation extraction. In this work, we focus on relation extraction in a transfer learning set-up. To improve the generalisation, we propose an extension to the decoding mechanism of large language models. We adapt Chain-of-Thought (CoT) decoding, recently developed for reasoning problems, to generative relation extraction. Here, we generate multiple branches in the decoding space and select the relations based on a confidence threshold. By constraining the decoding to ontology terms and relations, we aim to decrease the risk of hallucination. We conduct extensive experimentation on two widely used datasets and find improvements in performance on target ontology for source fine-tuned and one-shot prompted large language models.

This paper addresses the need for improved precision in existing Retrieval-Augmented Generation (RAG) methods that primarily focus on enhancing recall. We propose a multi-layer knowledge pyramid approach within the RAG framework to achieve a better balance between precision and recall. The knowledge pyramid consists of three layers: Ontologies, Knowledge Graphs (KGs), and chunk-based raw text. We employ cross-layer augmentation techniques for comprehensive knowledge coverage and dynamic updates of the Ontology schema and instances. To ensure compactness, we utilize cross-layer filtering methods for knowledge condensation in KGs. Our approach, named PolyRAG, follows a waterfall model for retrieval, starting from the top of the pyramid and progressing down until a confident answer is obtained. We introduce two benchmarks for domain-specific knowledge retrieval, one in the academic domain and the other in the financial domain. The effectiveness of the methods has been validated through comprehensive experiments by outperforming 19 SOTA methods. An encouraging observation is that the proposed method has augmented the GPT-4, providing 395\% F1 gain by improving its performance from 0.1636 to 0.8109.

While large language models learn sound statistical representations of the language and information therein, ontologies are symbolic knowledge representations that can complement the former ideally. Research at this critical intersection relies on datasets that intertwine ontologies and text corpora to enable training and comprehensive benchmarking of neurosymbolic models. We present the MaterioMiner dataset and the linked materials mechanics ontology where ontological concepts from the mechanics of materials domain are associated with textual entities within the literature corpus. Another distinctive feature of the dataset is its eminently fine-granular annotation. Specifically, 179 distinct classes are manually annotated by three raters within four publications, amounting to a total of 2191 entities that were annotated and curated. Conceptual work is presented for the symbolic representation of causal composition-process-microstructure-property relationships. We explore the annotation consistency between the three raters and perform fine-tuning of pre-trained models to showcase the feasibility of named-entity recognition model training. Reusing the dataset can foster training and benchmarking of materials language models, automated ontology construction, and knowledge graph generation from textual data.

What would happen if temperatures were subdued and result in a cool summer? One can easily imagine that air conditioner, ice cream or beer sales would be suppressed as a result of this. Less obvious is that agricultural shipments might be delayed, or that sound proofing material sales might decrease. The ability to extract such causal knowledge is important, but it is also important to distinguish between cause-effect pairs that are known and those that are likely to be unknown, or rare. Therefore, in this paper, we propose a method for extracting rare causal knowledge from Japanese financial statement summaries produced by companies. Our method consists of three steps. First, it extracts sentences that include causal knowledge from the summaries using a machine learning method based on an extended language ontology. Second, it obtains causal knowledge from the extracted sentences using syntactic patterns. Finally, it extracts the rarest causal knowledge from the knowledge it has obtained.

To improve cyber threat analysis practices in cybersecurity, I present a plan to build a formal ontological representation of state actors in cyberspace and of cyber operations. I argue that modelling these phenomena via ontologies allows for coherent integration of data coming from diverse sources, automated reasoning over such data, as well as intelligence extraction and reuse from and of them. Existing ontological tools in cybersecurity can be ameliorated by connecting them to neighboring domains such as law, regulations, governmental institutions, and documents. In this paper, I propose metrics to evaluate currently existing ontological tools to create formal representations in the cybersecurity domain, and I provide a plan to develop and extend them when they are lacking.

The Provenance Ontology (PROV-O) is a World Wide Web Consortium (W3C) recommended ontology used to structure data about provenance across a wide variety of domains. Basic Formal Ontology (BFO) is a top-level ontology ISO/IEC standard used to structure a wide variety of ontologies, such as the OBO Foundry ontologies and the Common Core Ontologies (CCO). To enhance interoperability between these two ontologies, their extensions, and data organized by them, an alignment is presented according to a specific mapping criteria and methodology which prioritizes structural and semantic considerations. The ontology alignment is evaluated by checking its logical consistency with canonical examples of PROV-O instances and querying terms that do not satisfy the mapping criteria as formalized in SPARQL. A variety of semantic web technologies are used in support of FAIR (Findable, Accessible, Interoperable, Reusable) principles.

In online learning, the ability to provide quick and accurate feedback to learners is crucial. In skill-based learning, learners need to understand the underlying concepts and mechanisms of a skill to be able to apply it effectively. While videos are a common tool in online learning, they cannot comprehend or assess the skills being taught. Additionally, while Generative AI methods are effective in searching and retrieving answers from a text corpus, it remains unclear whether these methods exhibit any true understanding. This limits their ability to provide explanations of skills or help with problem-solving. This paper proposes a novel approach that merges Cognitive AI and Generative AI to address these challenges. We employ a structured knowledge representation, the TMK (Task-Method-Knowledge) model, to encode skills taught in an online Knowledge-based AI course. Leveraging techniques such as Large Language Models, Chain-of-Thought, and Iterative Refinement, we outline a framework for generating reasoned explanations in response to learners' questions about skills.

It has been reliably shown that the similarity of word embeddings obtained from popular neural models such as BERT approximates effectively a form of semantic similarity of the meaning of those words. It is therefore natural to wonder if those embeddings contain enough information to be able to connect those meanings through ontological relationships such as the one of subsumption. If so, large knowledge models could be built that are capable of semantically relating terms based on the information encapsulated in word embeddings produced by pre-trained models, with implications not only for ontologies (ontology matching, ontology evolution, etc.) but also on the ability to integrate ontological knowledge in neural models. In this paper, we test how embeddings produced by several pre-trained models can be used to predict relations existing between classes and properties of popular upper-level and general ontologies. We show that even a simple feed-forward architecture on top of those embeddings can achieve promising accuracies, with varying generalisation abilities depending on the input data. To achieve that, we produce a dataset that can be used to further enhance those models, opening new possibilities for applications integrating knowledge from web ontologies.

Ontologies are formal representations of knowledge in specific domains that provide a structured framework for organizing and understanding complex information. Creating ontologies, however, is a complex and time-consuming endeavor. ChEBI is a well-known ontology in the field of chemistry, which provides a comprehensive resource for defining chemical entities and their properties. However, it covers only a small fraction of the rapidly growing knowledge in chemistry and does not provide references to the scientific literature. To address this, we propose a methodology that involves augmenting existing annotated text corpora with knowledge from Chebi and fine-tuning a large language model (LLM) to recognize chemical entities and their roles in scientific text. Our experiments demonstrate the effectiveness of our approach. By combining ontological knowledge and the language understanding capabilities of LLMs, we achieve high precision and recall rates in identifying both the chemical entities and roles in scientific literature. Furthermore, we extract them from a set of 8,000 ChemRxiv articles, and apply a second LLM to create a knowledge graph (KG) of chemical entities and roles (CEAR), which provides complementary information to ChEBI, and can help to extend it.