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Electronic health records (EHRs) are stored in various database systems with different database models on heterogeneous storage architectures, such as relational databases, document stores, or graph databases. These different database models have a big impact on query complexity and performance. While this has been a known fact in database research, its implications for the growing number of Text-to-Query systems have surprisingly not been investigated so far. In this paper, we present SM3-Text-to-Query, the first multi-model medical Text-to-Query benchmark based on synthetic patient data from Synthea, following the SNOMED-CT taxonomy -- a widely used knowledge graph ontology covering medical terminology. SM3-Text-to-Query provides data representations for relational databases (PostgreSQL), document stores (MongoDB), and graph databases (Neo4j and GraphDB (RDF)), allowing the evaluation across four popular query languages, namely SQL, MQL, Cypher, and SPARQL. We systematically and manually develop 408 template questions, which we augment to construct a benchmark of 10K diverse natural language question/query pairs for these four query languages (40K pairs overall). On our dataset, we evaluate several common in-context-learning (ICL) approaches for a set of representative closed and open-source LLMs. Our evaluation sheds light on the trade-offs between database models and query languages for different ICL strategies and LLMs. Last, SM3-Text-to-Query is easily extendable to additional query languages or real, standard-based patient databases.

As automated decision-making solutions are increasingly applied to all aspects of everyday life, capabilities to generate meaningful explanations for a variety of stakeholders (i.e., decision-makers, recipients of decisions, auditors, regulators...) become crucial. In this paper, we present a taxonomy of explanations that was developed as part of a holistic 'Explainability-by-Design' approach for the purposes of the project PLEAD. The taxonomy was built with a view to produce explanations for a wide range of requirements stemming from a variety of regulatory frameworks or policies set at the organizational level either to translate high-level compliance requirements or to meet business needs. The taxonomy comprises nine dimensions. It is used as a stand-alone classifier of explanations conceived as detective controls, in order to aid supportive automated compliance strategies. A machinereadable format of the taxonomy is provided in the form of a light ontology and the benefits of starting the Explainability-by-Design journey with such a taxonomy are demonstrated through a series of examples.

Machine learning has become a crucial tool for predicting the properties of crystalline materials. However, existing methods primarily represent material information by constructing multi-edge graphs of crystal structures, often overlooking the chemical and physical properties of elements (such as atomic radius, electronegativity, melting point, and ionization energy), which have a significant impact on material performance. To address this limitation, we first constructed an element property knowledge graph and utilized an embedding model to encode the element attributes within the knowledge graph. Furthermore, we propose a multimodal fusion framework, ESNet, which integrates element property features with crystal structure features to generate joint multimodal representations. This provides a more comprehensive perspective for predicting the performance of crystalline materials, enabling the model to consider both microstructural composition and chemical characteristics of the materials. We conducted experiments on the Materials Project benchmark dataset, which showed leading performance in the bandgap prediction task and achieved results on a par with existing benchmarks in the formation energy prediction task.

Several initiatives have been undertaken to conceptually model the domain of scholarly data using ontologies and to create respective Knowledge Graphs. Yet, the full potential seems unleashed, as automated means for automatic population of said ontologies are lacking, and respective initiatives from the Semantic Web community are not necessarily connected: we propose to make scholarly data more sustainably accessible by leveraging Wikidata's infrastructure and automating its population in a sustainable manner through LLMs by tapping into unstructured sources like conference Web sites and proceedings texts as well as already existing structured conference datasets. While an initial analysis shows that Semantic Web conferences are only minimally represented in Wikidata, we argue that our methodology can help to populate, evolve and maintain scholarly data as a community within Wikidata. Our main contributions include (a) an analysis of ontologies for representing scholarly data to identify gaps and relevant entities/properties in Wikidata, (b) semi-automated extraction -- requiring (minimal) manual validation -- of conference metadata (e.g., acceptance rates, organizer roles, programme committee members, best paper awards, keynotes, and sponsors) from websites and proceedings texts using LLMs. Finally, we discuss (c) extensions to visualization tools in the Wikidata context for data exploration of the generated scholarly data. Our study focuses on data from 105 Semantic Web-related conferences and extends/adds more than 6000 entities in Wikidata. It is important to note that the method can be more generally applicable beyond Semantic Web-related conferences for enhancing Wikidata's utility as a comprehensive scholarly resource. Source Repository: https://github.com/scholarly-wikidata/ DOI: https://doi.org/10.5281/zenodo.10989709 License: Creative Commons CC0 (Data), MIT (Code)

In an era where data privacy is paramount, the challenge of sharing information without compromising sensitive details has become more relevant than ever. Here, we consider the framework known as Controlled Query Evaluation (CQE), an innovative approach that safeguards confidentiality while still providing maximal query answers. We present an extension of this framework that enhances its expressivity through the use of rich forms of data protection rules. We explore the practical importance of these rules and some of the technical underpinnings that make this system effective. We then study some computational properties when data are managed through ontologies specified in DL-LiteR, a popular language designed for efficient reasoning in data-intensive applications.

Hallucinations of large language models (LLMs) commonly occur in domain-specific downstream tasks, with no exception in ontology matching (OM). The prevalence of using LLMs for OM raises the need for benchmarks to better understand LLM hallucinations. The OAEI-LLM dataset is an extended version of the Ontology Alignment Evaluation Initiative (OAEI) datasets that evaluate LLM-specific hallucinations in OM tasks. We outline the methodology used in dataset construction and schema extension, and provide examples of potential use cases.

To effectively manage and utilize knowledge graphs, it is crucial to have metrics that can assess the quality of knowledge graphs from various perspectives. While there have been studies on knowledge graph quality metrics, there has been a lack of research on metrics that measure how richly ontologies, which form the backbone of knowledge graphs, are defined or the impact of richly defined ontologies. In this study, we propose a new metric called Class Granularity, which measures how well a knowledge graph is structured in terms of how finely classes with unique characteristics are defined. Furthermore, this research presents potential impact of Class Granularity in knowledge graph's on downstream tasks. In particular, we explore its influence on graph embedding and provide experimental results. Additionally, this research goes beyond traditional Linked Open Data comparison studies, which mainly focus on factors like scale and class distribution, by using Class Granularity to compare four different LOD sources.

Tabular data plays a pivotal role in various fields, making it a popular format for data manipulation and exchange, particularly on the web. The interpretation, extraction, and processing of tabular information are invaluable for knowledge-intensive applications. Notably, significant efforts have been invested in annotating tabular data with ontologies and entities from background knowledge graphs, a process known as Semantic Table Interpretation (STI). STI automation aids in building knowledge graphs, enriching data, and enhancing web-based question answering. This survey aims to provide a comprehensive overview of the STI landscape. It starts by categorizing approaches using a taxonomy of 31 attributes, allowing for comparisons and evaluations. It also examines available tools, assessing them based on 12 criteria. Furthermore, the survey offers an in-depth analysis of the Gold Standards used for evaluating STI approaches. Finally, it provides practical guidance to help end-users choose the most suitable approach for their specific tasks while also discussing unresolved issues and suggesting potential future research directions.

In the era of Generative AI, Neurosymbolic AI is emerging as a powerful approach for tasks spanning from perception to cognition. The use of Neurosymbolic AI has been shown to achieve enhanced capabilities, including improved grounding, alignment, explainability, and reliability. However, due to its nascent stage, there is a lack of widely available real-world benchmark datasets tailored to Neurosymbolic AI tasks. To address this gap and support the evaluation of current and future methods, we introduce DSceneKG -- a suite of knowledge graphs of driving scenes built from real-world, high-quality scenes from multiple open autonomous driving datasets. In this article, we detail the construction process of DSceneKG and highlight its application in seven different tasks. DSceneKG is publicly accessible at: https://github.com/ruwantw/DSceneKG