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 Ontologies


Integration of Contextual Descriptors in Ontology Alignment for Enrichment of Semantic Correspondence

arXiv.org Artificial Intelligence

This paper proposes a novel approach to semantic ontology alignment using contextual descriptors. A formalization was developed that enables the integration of essential and contextual descriptors to create a comprehensive knowledge model. The hierarchical structure of the semantic approach and the mathematical apparatus for analyzing potential conflicts between concepts, particularly in the example of "Transparency" and "Privacy" in the context of artificial intelligence, are demonstrated. Experimental studies showed a significant improvement in ontology alignment metrics after the implementation of contextual descriptors, especially in the areas of privacy, responsibility, and freedom & autonomy. The application of contextual descriptors achieved an average overall improvement of approximately 4.36%. The results indicate the effectiveness of the proposed approach for more accurately reflecting the complexity of knowledge and its contextual dependence.


Perturbation Ontology based Graph Attention Networks

arXiv.org Artificial Intelligence

In recent years, graph representation learning has undergone a paradigm shift, driven by the emergence and proliferation of graph neural networks (GNNs) and their heterogeneous counterparts. Heterogeneous GNNs have shown remarkable success in extracting low-dimensional embeddings from complex graphs that encompass diverse entity types and relationships. While meta-path-based techniques have long been recognized for their ability to capture semantic affinities among nodes, their dependence on manual specification poses a significant limitation. In contrast, matrix-focused methods accelerate processing by utilizing structural cues but often overlook contextual richness. In this paper, we challenge the current paradigm by introducing ontology as a fundamental semantic primitive within complex graphs. Our goal is to integrate the strengths of both matrix-centric and meta-path-based approaches into a unified framework. We propose perturbation Ontology-based Graph Attention Networks (POGAT), a novel methodology that combines ontology subgraphs with an advanced self-supervised learning paradigm to achieve a deep contextual understanding. The core innovation of POGAT lies in our enhanced homogeneous perturbing scheme designed to generate rigorous negative samples, encouraging the model to explore minimal contextual features more thoroughly. Through extensive empirical evaluations, we demonstrate that POGAT significantly outperforms state-of-the-art baselines, achieving a groundbreaking improvement of up to 10.78\% in F1-score for the critical task of link prediction and 12.01\% in Micro-F1 for the critical task of node classification.


Online Knowledge Integration for 3D Semantic Mapping: A Survey

arXiv.org Artificial Intelligence

Semantic mapping is a key component of robots operating in and interacting with objects in structured environments. Traditionally, geometric and knowledge representations within a semantic map have only been loosely integrated. However, recent advances in deep learning now allow full integration of prior knowledge, represented as knowledge graphs or language concepts, into sensor data processing and semantic mapping pipelines. Semantic scene graphs and language models enable modern semantic mapping approaches to incorporate graph-based prior knowledge or to leverage the rich information in human language both during and after the mapping process. This has sparked substantial advances in semantic mapping, leading to previously impossible novel applications. This survey reviews these recent developments comprehensively, with a focus on online integration of knowledge into semantic mapping. We specifically focus on methods using semantic scene graphs for integrating symbolic prior knowledge and language models for respective capture of implicit common-sense knowledge and natural language concepts


Adapter-based Approaches to Knowledge-enhanced Language Models -- A Survey

arXiv.org Artificial Intelligence

Knowledge-enhanced language models (KELMs) have emerged as promising tools to bridge the gap between large-scale language models and domain-specific knowledge. KELMs can achieve higher factual accuracy and mitigate hallucinations by leveraging knowledge graphs (KGs). They are frequently combined with adapter modules to reduce the computational load and risk of catastrophic forgetting. In this paper, we conduct a systematic literature review (SLR) on adapter-based approaches to KELMs. We provide a structured overview of existing methodologies in the field through quantitative and qualitative analysis and explore the strengths and potential shortcomings of individual approaches. We show that general knowledge and domain-specific approaches have been frequently explored along with various adapter architectures and downstream tasks. We particularly focused on the popular biomedical domain, where we provided an insightful performance comparison of existing KELMs. We outline the main trends and propose promising future directions.


F -- A Model of Events based on the Foundational Ontology DOLCE+DnS Ultralite

arXiv.org Artificial Intelligence

The lack of a formal model of events hinders interoperability in distributed event-based systems. In this paper, we present a formal model of events, called Event-Model-F. The model is based on the foundational ontology DOLCE+DnS Ultralite (DUL) and provides comprehensive support to represent time and space, objects and persons, as well as mereological, causal, and correlative relationships between events. In addition, the Event-Model-F provides a flexible means for event composition, modeling event causality and event correlation, and representing different interpretations of the same event. The Event-Model-F is developed following the pattern-oriented approach of DUL, is modularized in different ontologies, and can be easily extended by domain specific ontologies.


OM4OV: Leveraging Ontology Matching for Ontology Versioning

arXiv.org Artificial Intelligence

Due to the dynamic nature of the semantic web, ontology version control is required to capture time-varying information, most importantly for widely-used ontologies. Despite the long-standing recognition of ontology versioning (OV) as a crucial component for efficient ontology management, the growing size of ontologies and accumulating errors caused by manual labour overwhelm current OV approaches. In this paper, we propose yet another approach to performing OV using existing ontology matching (OM) techniques and systems. We introduce a unified OM4OV pipeline. From an OM perspective, we reconstruct a new task formulation, measurement, and testbed for OV tasks. Reusing the prior alignment(s) from OM, we propose a pipeline optimisation method called cross-reference (CR) mechanism to improve overall OV performance. We experimentally validate the OM4OV pipeline and the cross-reference mechanism in modified Ontology Alignment Evaluation Initiative (OAEI) datasets. We also discuss the insights on OM used for OV tasks, where some false mappings detected by OV systems are not actually false.


How Does A Text Preprocessing Pipeline Affect Ontology Syntactic Matching?

arXiv.org Artificial Intelligence

The generic text preprocessing pipeline, comprising Tokenisation, Normalisation, Stop Words Removal, and Stemming/Lemmatisation, has been implemented in many ontology matching (OM) systems. However, the lack of standardisation in text preprocessing creates diversity in mapping results. In this paper, we investigate the effect of the text preprocessing pipeline on OM tasks at syntactic levels. Our experiments on 8 Ontology Alignment Evaluation Initiative (OAEI) track repositories with 49 distinct alignments indicate: (1) Tokenisation and Normalisation are currently more effective than Stop Words Removal and Stemming/Lemmatisation; and (2) The selection of Lemmatisation and Stemming is task-specific. We recommend standalone Lemmatisation or Stemming with post-hoc corrections. We find that (3) Porter Stemmer and Snowball Stemmer perform better than Lancaster Stemmer; and that (4) Part-of-Speech (POS) Tagging does not help Lemmatisation. To repair less effective Stop Words Removal and Stemming/Lemmatisation used in OM tasks, we propose a novel context-based pipeline repair approach that significantly improves matching correctness and overall matching performance. We also discuss the use of text preprocessing pipeline in the new era of large language models (LLMs).


Class Order Disorder in Wikidata and First Fixes

arXiv.org Artificial Intelligence

Wikidata has a large ontology with classes at several orders. The Wikidata ontology has long been known to have violations of class order and information related to class order that appears suspect. SPARQL queries were evaluated against Wikidata to determine the prevalence of several kinds of violations and suspect information and the results analyzed. Some changes were manually made to Wikidata to remove some of these results and the queries rerun, showing the effect of the changes. Suggestions are provided on how the problems uncovered might be addressed, either though better tooling or involvement of the Wikidata community.


IRSKG: Unified Intrusion Response System Knowledge Graph Ontology for Cyber Defense

arXiv.org Artificial Intelligence

Cyberattacks are becoming increasingly difficult to detect and prevent due to their sophistication. In response, Autonomous Intelligent Cyber-defense Agents (AICAs) are emerging as crucial solutions. One prominent AICA agent is the Intrusion Response System (IRS), which is critical for mitigating threats after detection. IRS uses several Tactics, Techniques, and Procedures (TTPs) to mitigate attacks and restore the infrastructure to normal operations. Continuous monitoring of the enterprise infrastructure is an essential TTP the IRS uses. However, each system serves different purposes to meet operational needs. Integrating these disparate sources for continuous monitoring increases pre-processing complexity and limits automation, eventually prolonging critical response time for attackers to exploit. We propose a unified IRS Knowledge Graph ontology (IRSKG) that streamlines the onboarding of new enterprise systems as a source for the AICAs. Our ontology can capture system monitoring logs and supplemental data, such as a rules repository containing the administrator-defined policies to dictate the IRS responses. Besides, our ontology permits us to incorporate dynamic changes to adapt to the evolving cyber-threat landscape. This robust yet concise design allows machine learning models to train effectively and recover a compromised system to its desired state autonomously with explainability.


Ontology-Constrained Generation of Domain-Specific Clinical Summaries

arXiv.org Artificial Intelligence

Large Language Models (LLMs) offer promising solutions for text summarization. However, some domains require specific information to be available in the summaries. Generating these domain-adapted summaries is still an open challenge. Similarly, hallucinations in generated content is a major drawback of current approaches, preventing their deployment. This study proposes a novel approach that leverages ontologies to create domain-adapted summaries both structured and unstructured. We employ an ontology-guided constrained decoding process to reduce hallucinations while improving relevance. When applied to the medical domain, our method shows potential in summarizing Electronic Health Records (EHRs) across different specialties, allowing doctors to focus on the most relevant information to their domain. Evaluation on the MIMIC-III dataset demonstrates improvements in generating domain-adapted summaries of clinical notes and hallucination reduction.