Ontologies
Foundation Ontologies Requirements for Global City Indicators
Fox, Mark S. (University of Toronto)
City Indicators are metrics used to measure city per- formance. Global City Indicators, as developed by the Global Cities Institute at the University of Toronto, are metrics that have been agreed to by over 250 cities world wide and have been approved as ISO 37120. The definitions of the indicators exist only in written form. The purpose of this research is to provide an ontology for representing the definition of these indi- cators and their instantiation by cities worldwide so that they can shared across the Semantic Web. This paper describes the requirements for the ontology and provides an example of its use.
An Ontology for Ecological Urbanism. SUM+Ecology
Cormenzana, Berta (BCN Ecologia) | Fabregas, Ferran (BCN Ecologia) | Marinescu, Maria-Cristina (Barcelona Supercomputing Center) | Marrero, Monica (Barcelona Supercomputing center) | Rueda, Salvador (BCN Ecologia) | Uceda-Sosa, Rosario (IBM Research)
As the complexity and abundance of city data increases, reusable semantic models that can integrate heterogeneous data sources in a lightweight manner enable a holistic view of the city data, which is key to Urban Ecology. Our multi-disciplinary team has built an ontology for Urban Ecology that not only captures a field-validated urban model and certification process, but also explores the reuse of semantic models and their interaction with domain experts.
Semantically Integrating Biomedical Databases to Support Inference
Livingston, Kevin M. (University of Colorado) | Bada, Michael (University of Colorado) | Baumgartner, William A. (University of Colorado) | Hunter, Lawrence E. (University of Colorado)
We have built KaBOB (Knowledge Base of Biomedicine) by integrating information from over 20 existing biomedical data sources about humans and seven major model organisms. The knowledge base is modeled in OWL and grounded in 14 prominent OBOs (Open Biomedical Ontologies). It is comprised of over 419 million RDF triples. Queries can be posed to KaBOB in terms of biomedical concepts and abstractions, instead of requiring knowledge of source-specific encodings and terminology.
Data Quality in Ontology-based Data Access: The Case of Consistency
Console, Marco (Sapienza, university of Rome) | Lenzerini, Maurizio (Sapienza, university of Rome)
Ontology-based data access (OBDA) is a new paradigm aiming at accessing and managing data by means of an ontology, i.e., a conceptual representation of the domain of interest in the underlying information system. In the last years, this new paradigm has been used for providing users with abstract (independent from technological and system-oriented aspects), effective, and reasoning-intensive mechanisms for querying the data residing at the information system sources. In this paper we argue that OBDA, besides querying data, provides the right principles for devising a formal approach to data quality. In particular, we concentrate on one of the most important dimensions considered both in the literature and in the practice of data quality, namely consistency. We define a general framework for data consistency in OBDA, and present algorithms and complexity analysis for several relevant tasks related to the problem of checking data quality under this dimension, both at the extensional level (content of the data sources), and at the intensional level (schema of the data sources).
ARIA: Asymmetry Resistant Instance Alignment
Lee, Sanghoon (POSTECH) | Hwang, Seung-won (POSTECH)
We study the problem of instance alignment between knowledge bases (KBs). Existing approaches, exploiting the “symmetry” of structure and information across KBs, suffer in the presence of asymmetry, which is frequent as KBs are independently built. Specifically, we observe three types of asymmetries (in concepts, in features, and in structures). Our goal is to identify key techniques to reduce accuracy loss caused by each type of asymmetry, then design Asymmetry-Resistant Instance Alignment framework (ARIA). ARIA uses two-phased blocking methods considering concept and feature asymmetries, with a novel similarity measure overcoming structure asymmetry. Compared to a state-of-the-art method, ARIA increased precision by 19% and recall by 2%, and decreased processing time by more than 80% in matching large-scale real-life KBs.
Converting Instance Checking to Subsumption: A Rethink for Object Queries over Practical Ontologies
Xu, Jia (University of Miami) | Visser, Ubbo (University of Miami) | Kabuka, Mansur (University of Miami)
Instance checking is considered a central service for data retrieval from description logic (DL) ontologies. In this paper, we propose a revised most specific concept (MSC) method for DL SHI}, which converts instance checking into subsumption problems. This revised method can generate small concepts that are specific-enough to answer a given query, and allow reasoning to explore only a subset of the ABox data to achieve efficiency. Experiments show effectiveness of our proposed method in terms of concept size reduction and the improvement in reasoning efficiency.
Contraction and Revision over DL-Lite TBoxes
Zhuang, Zhiqiang (Griffith University) | Wang, Zhe (Griffith University) | Wang, Kewen (Griffith University) | Qi, Guilin (Southeast University)
Two essential tasks in managing Description Logic (DL) ontologies are eliminating problematic axioms and incorporating newly formed axioms. Such elimination and incorporation are formalised as the operations of contraction and revision in belief change.In this paper, we deal with contraction and revision for the DL-Lite family through a model-theoretic approach.Standard DL semantics yields infinite numbers of models for DL-Lite TBoxes, thus it is not practical to develop algorithms for contraction and revision that involve DL models. The key to our approach is the introduction of an alternative semantics called type semantics which is more succinct than DL semantics. More importantly, with a finite signature, type semantics always yields finite humber of models.We then define model-based contraction and revision for DL-Lite TBoxesunder type semantics and provide representation theorems for them.Finally, the succinctness of type semantics allows us to develop tractable algorithms for both operations.
Pay-As-You-Go OWL Query Answering Using a Triple Store
Zhou, Yujiao (University of Oxford) | Nenov, Yavor (University of Oxford) | Grau, Bernardo Cuenca (University of Oxford) | Horrocks, Ian (University of Oxford)
We present an enhanced hybrid approach to OWL query answering that combines an RDF triple-store with an OWL reasoner in order to provide scalable pay-as-you-go performance. The enhancements presented here include an extension to deal with arbitrary OWL ontologies, and optimisations that significantly improve scalability. We have implemented these techniques in a prototype system, a preliminary evaluation of which has produced very encouraging results.
Abduction Framework for Repairing Incomplete EL Ontologies: Complexity Results and Algorithms
Wei-Kleiner, Fang (Linköping University) | Dragisic, Zlatan (Linköping University) | Lambrix, Patrick (Linköping University)
In this paper we consider the problem of repairing missing is-a relations in ontologies. We formalize the problem as a generalized TBox abduction problem (GTAP). Based on this abduction framework, we present complexity results for the existence, relevance and necessity decision problems for the GTAP with and without some specific preference relations for ontologies that can be represented using a member of the EL family of description logics. Further, we present algorithms for finding solutions, a system as well as experiments.
Datalog Rewritability of Disjunctive Datalog Programs and its Applications to Ontology Reasoning
Kaminski, Mark (University of Oxford) | Nenov, Yavor (University of Oxford) | Grau, Bernardo Cuenca (University of Oxford)
We study the problem of rewriting a disjunctive datalog program into plain datalog. We show that a disjunctive program is rewritable if and only if it is equivalent to a linear disjunctive program, thus providing a novel characterisation of datalog rewritability. Motivated by this result, we propose weakly linear disjunctive datalog -- a novel rule-based KR language that extends both datalog and linear disjunctive datalog and for which reasoning is tractable in data complexity. We then explore applications of weakly linear programs to ontology reasoning and propose a tractable extension of OWL 2 RL with disjunctive axioms. Our empirical results suggest that many non-Horn ontologies can be reduced to weakly linear programs and that query answering over such ontologies using a datalog engine is feasible in practice.