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 Ontologies


Knowledge mining of unstructured information: application to cyber-domain

arXiv.org Artificial Intelligence

Information on cyber-related crimes, incidents, and conflicts is abundantly available in numerous open online sources. However, processing the large volumes and streams of data is a challenging task for the analysts and experts, and entails the need for newer methods and techniques. In this article we present and implement a novel knowledge graph and knowledge mining framework for extracting the relevant information from free-form text about incidents in the cyberdomain. The framework includes a machine learning based pipeline for generating graphs of organizations, countries, industries, products and attackers with a non-technical cyber-ontology. The extracted knowledge graph is utilized to estimate the incidence of cyberattacks on a given graph configuration. We use publicly available collections of real cyber-incident reports to test the efficacy of our methods. The knowledge extraction is found to be sufficiently accurate, and the graph-based threat estimation demonstrates a level of correlation with the actual records of attacks. In practical use, an analyst utilizing the presented framework can infer additional information from the current cyber-landscape in terms of risk to various entities and propagation of the risk heuristic between industries and countries.


Repairing $\mathcal{EL}$ Ontologies Using Weakening and Completing

arXiv.org Artificial Intelligence

The quality of ontologies in terms of their correctness and completeness is crucial for developing high-quality ontology-based applications. Traditional debugging techniques repair ontologies by removing unwanted axioms, but may thereby remove consequences that are correct in the domain of the ontology. In this paper we propose an interactive approach to mitigate this for $\mathcal{EL}$ ontologies by axiom weakening and completing. We present algorithms for weakening and completing and present the first approach for repairing that takes into account removing, weakening and completing. We show different combination strategies, discuss the influence on the final ontologies and show experimental results. We show that previous work has only considered special cases and that there is a trade-off between the amount of validation work for a domain expert and the quality of the ontology in terms of correctness and completeness.


Curriculum Learning for Data-Efficient Vision-Language Alignment

arXiv.org Artificial Intelligence

Aligning image and text encoders from scratch using contrastive learning requires large amounts of paired image-text data. We alleviate this need by aligning individually pre-trained language and vision representation models using a much smaller amount of paired data, augmented with a curriculum learning algorithm to learn fine-grained vision-language alignments. TOnICS (Training with Ontology-Informed Contrastive Sampling) initially samples minibatches whose image-text pairs contain a wide variety of objects to learn object-level alignment, and progressively samples minibatches where all image-text pairs contain the same object to learn finer-grained contextual alignment. Aligning pre-trained BERT and VinVL models to each other using TOnICS outperforms CLIP on downstream zero-shot image retrieval while using less than 1% as much training data.


A Survey of Syntactic Modelling Structures in Biomedical Ontologies

arXiv.org Artificial Intelligence

Despite the large-scale uptake of semantic technologies in the biomedical domain, little is known about common modelling practices in published ontologies. OWL ontologies are often published only in the crude form of sets of axioms leaving the underlying design opaque. However, a principled and systematic ontology development life cycle is likely to be reflected in regularities of the ontology's emergent syntactic structure. To develop an understanding of this emergent structure, we propose to reverse-engineer ontologies taking a syntax-directed approach for identifying and analysing regularities for axioms and sets of axioms. We survey BioPortal in terms of syntactic modelling trends and common practices for OWL axioms and class frames. Our findings suggest that biomedical ontologies only share simple syntactic structures in which OWL constructors are not deeply nested or combined in a complex manner. While such simple structures often account for large proportions of axioms in a given ontology, many ontologies also contain non-trivial amounts of more complex syntactic structures that are not common across ontologies.


CQE in OWL 2 QL: A "Longest Honeymoon" Approach (extended version)

arXiv.org Artificial Intelligence

Controlled Query Evaluation (CQE) has been recently studied in the context of Semantic Web ontologies. The goal of CQE is concealing some query answers so as to prevent external users from inferring confidential information. In general, there exist multiple, mutually incomparable ways of concealing answers, and previous CQE approaches choose in advance which answers are visible and which are not. In this paper, instead, we study a dynamic CQE method, namely, we propose to alter the answer to the current query based on the evaluation of previous ones. We aim at a system that, besides being able to protect confidential data, is maximally cooperative, which intuitively means that it answers affirmatively to as many queries as possible; it achieves this goal by delaying answer modifications as much as possible. We also show that the behavior we get cannot be intensionally simulated through a static approach, independent of query history. Interestingly, for OWL 2 QL ontologies and policy expressed through denials, query evaluation under our semantics is first-order rewritable, and thus in AC0 in data complexity. This paves the way for the development of practical algorithms, which we also preliminarily discuss in the paper.


AI-based Data Preparation and Data Analytics in Healthcare: The Case of Diabetes

arXiv.org Artificial Intelligence

The Associazione Medici Diabetologi (AMD) collects and manages one of the largest worldwide-available collections of diabetic patient records, also known as the AMD database. This paper presents the initial results of an ongoing project whose focus is the application of Artificial Intelligence and Machine Learning techniques for conceptualizing, cleaning, and analyzing such an important and valuable dataset, with the goal of providing predictive insights to better support diabetologists in their diagnostic and therapeutic choices.


The Need for a Meta-Architecture for Robot Autonomy

arXiv.org Artificial Intelligence

Long-term autonomy of robotic systems implicitly requires dependable platforms that are able to naturally handle hardware and software faults, problems in behaviors, or lack of knowledge. Model-based dependable platforms additionally require the application of rigorous methodologies during the system development, including the use of correct-by-construction techniques to implement robot behaviors. As the level of autonomy in robots increases, so do the cost of offering guarantees about the dependability of the system. Certifiable dependability of autonomous robots, we argue, can benefit from formal models of the integration of several cognitive functions, knowledge processing, reasoning, and meta-reasoning. Here we put forward the case for a generative model of cognitive architectures for autonomous robotic agents that subscribes to the principles of model-based engineering and certifiable dependability, autonomic computing, and knowledge-enabled robotics.


Efficient Dependency Analysis for Rule-Based Ontologies

arXiv.org Artificial Intelligence

Several types of dependencies have been proposed for the static analysis of existential rule ontologies, promising insights about computational properties and possible practical uses of a given set of rules, e.g., in ontology-based query answering. Unfortunately, these dependencies are rarely implemented, so their potential is hardly realised in practice. We focus on two kinds of rule dependencies -- positive reliances and restraints -- and design and implement optimised algorithms for their efficient computation. Experiments on real-world ontologies of up to more than 100,000 rules show the scalability of our approach, which lets us realise several previously proposed applications as practical case studies. In particular, we can analyse to what extent rule-based bottom-up approaches of reasoning can be guaranteed to yield redundancy-free "lean" knowledge graphs (so-called cores) on practical ontologies.


SeLoC-ML: Semantic Low-Code Engineering for Machine Learning Applications in Industrial IoT

arXiv.org Artificial Intelligence

Internet of Things (IoT) is transforming the industry by bridging the gap between Information Technology (IT) and Operational Technology (OT). Machines are being integrated with connected sensors and managed by intelligent analytics applications, accelerating digital transformation and business operations. Bringing Machine Learning (ML) to industrial devices is an advancement aiming to promote the convergence of IT and OT. However, developing an ML application in industrial IoT (IIoT) presents various challenges, including hardware heterogeneity, non-standardized representations of ML models, device and ML model compatibility issues, and slow application development. Successful deployment in this area requires a deep understanding of hardware, algorithms, software tools, and applications. Therefore, this paper presents a framework called Semantic Low-Code Engineering for ML Applications (SeLoC-ML), built on a low-code platform to support the rapid development of ML applications in IIoT by leveraging Semantic Web technologies. SeLoC-ML enables non-experts to easily model, discover, reuse, and matchmake ML models and devices at scale. The project code can be automatically generated for deployment on hardware based on the matching results. Developers can benefit from semantic application templates, called recipes, to fast prototype end-user applications. The evaluations confirm an engineering effort reduction by a factor of at least three compared to traditional approaches on an industrial ML classification case study, showing the efficiency and usefulness of SeLoC-ML. We share the code and welcome any contributions.


Knowledge Representation in Digital Agriculture: A Step Towards Standardised Model

arXiv.org Artificial Intelligence

In recent years, data science has evolved significantly. Data analysis and mining processes become routines in all sectors of the economy where datasets are available. Vast data repositories have been collected, curated, stored, and used for extracting knowledge. And this is becoming commonplace. Subsequently, we extract a large amount of knowledge, either directly from the data or through experts in the given domain. The challenge now is how to exploit all this large amount of knowledge that is previously known for efficient decision-making processes. Until recently, much of the knowledge gained through a number of years of research is stored in static knowledge bases or ontologies, while more diverse and dynamic knowledge acquired from data mining studies is not centrally and consistently managed. In this research, we propose a novel model called ontology-based knowledge map to represent and store the results (knowledge) of data mining in crop farming to build, maintain, and enrich the process of knowledge discovery. The proposed model consists of six main sets: concepts, attributes, relations, transformations, instances, and states. This model is dynamic and facilitates the access, updates, and exploitation of the knowledge at any time. This paper also proposes an architecture for handling this knowledge-based model. The system architecture includes knowledge modelling, extraction, assessment, publishing, and exploitation. This system has been implemented and used in agriculture for crop management and monitoring. It is proven to be very effective and promising for its extension to other domains.