Ontologies
The Algebra of Meaning: Why Machines Need Montague More Than Moore's Law
Jeong, Cheonkam, Kim, Sungdo, Park, Jewoo
Contemporary language models are fluent yet routinely mis-handle the types of meaning their outputs entail. We argue that hallucination, brittle moderation, and opaque compliance outcomes are symptoms of missing type-theoretic semantics rather than data or scale limitations. Building on Montague's view of language as typed, compositional algebra, we recast alignment as a parsing problem: natural-language inputs must be compiled into structures that make explicit their descriptive, normative, and legal dimensions under context. We present Savassan, a neuro-symbolic architecture that compiles utterances into Montague-style logical forms and maps them to typed ontologies extended with deontic operators and jurisdictional contexts. Neural components extract candidate structures from unstructured inputs; symbolic components perform type checking, constraint reasoning, and cross-jurisdiction mapping to produce compliance-aware guidance rather than binary censorship. In cross-border scenarios, the system "parses once" (e.g., defect claim(product x, company y)) and projects the result into multiple legal ontologies (e.g., defamation risk in KR/JP, protected opinion in US, GDPR checks in EU), composing outcomes into a single, explainable decision. This paper contributes: (i) a diagnosis of hallucination as a type error; (ii) a formal Montague-ontology bridge for business/legal reasoning; and (iii) a production-oriented design that embeds typed interfaces across the pipeline. We outline an evaluation plan using legal reasoning benchmarks and synthetic multi-jurisdiction suites. Our position is that trustworthy autonomy requires compositional typing of meaning, enabling systems to reason about what is described, what is prescribed, and what incurs liability within a unified algebra of meaning.
Flavonoid Fusion: Creating a Knowledge Graph to Unveil the Interplay Between Food and Health
Dalal, Aryan Singh, Zhang, Yinglun, Doฤan, Duru, ฤฐleri, Atalay Mert, McGinty, Hande Kรผรงรผk
The focus on'food as medicine' is gaining traction in the field of health and several studies conducted in the past few years discussed this aspect of food in the literature. However, very little research has been done on representing the relationship between food and health in a standardized, machine - readable fo rmat using a semantic web that can help us leverage this knowledge effectively. To address this gap, this study aims to create a knowledge graph to link food and health through the knowledge graphs' ability to combine information from various platforms foc using on flavonoid contents of food found in the USDA's databases and cancer connections found in the literature. We looked closely at these relationships using KNARM methodology and represented them in machine - operable format. The proposed knowledge graph serves as an example for researchers, enabling them to explore the complex interplay between dietary choices and disease management. Future work for this study involves expanding the scope of the knowledge graph by capturing nuances, adding more related d ata, and performing inferences on the acquired knowledge to uncover hidden relationships.
KEEP: Integrating Medical Ontologies with Clinical Data for Robust Code Embeddings
Elhussein, Ahmed, Meddeb, Paul, Newbury, Abigail, Mirone, Jeanne, Stoll, Martin, Gursoy, Gamze
Machine learning in healthcare requires effective representation of structured medical codes, but current methods face a trade-off: knowledge graph-based approaches capture formal relationships but miss real-world patterns, while data-driven methods learn empirical associations but often overlook structured knowledge in medical terminologies. We present KEEP (Knowledge-preserving and Empirically refined Embedding Process), an efficient framework that bridges this gap by combining knowledge graph embeddings with adaptive learning from clinical data. KEEP first generates embeddings from knowledge graphs, then employs regularized training on patient records to adaptively integrate empirical patterns while preserving ontological relationships. Importantly, KEEP produces final embeddings without task-specific axillary or end-to-end training enabling KEEP to support multiple downstream applications and model architectures. Evaluations on structured EHR from UK Biobank and MIMIC-IV demonstrate that KEEP outperforms both traditional and Language Model-based approaches in capturing semantic relationships and predicting clinical outcomes. Moreover, KEEP's minimal computational requirements make it particularly suitable for resource-constrained environments. Data and Code Availability This research has been conducted using data from UK Biobank (Sud-low et al., 2015) and MIMIC-IV Johnson et al. (2021). Researchers can request access via https:// www.ukbiobank.ac.uk/ and https://physionet.
Legal Knowledge Graph Foundations, Part I: URI-Addressable Abstract Works (LRMoo F1 to schema.org)
Building upon a formal, event-centric model for the diachronic evolution of legal norms grounded in the IFLA Library Reference Model (LRMoo), this paper addresses the essential first step of publishing this model's foundational entity-the abstract legal Work (F1)-on the Semantic Web. We propose a detailed, property-by-property mapping of the LRMoo F1 Work to the widely adopted schema.org/Legislation vocabulary. Using Brazilian federal legislation from the Normas.leg.br portal as a practical case study, we demonstrate how to create interoperable, machine-readable descriptions via JSON-LD, focusing on stable URN identifiers, core metadata, and norm relationships. This structured mapping establishes a stable, URI-addressable anchor for each legal norm, creating a verifiable "ground truth". It provides the essential, interoperable foundation upon which subsequent layers of the model, such as temporal versions (Expressions) and internal components, can be built. By bridging formal ontology with web-native standards, this work paves the way for building deterministic and reliable Legal Knowledge Graphs (LKGs), overcoming the limitations of purely probabilistic models.
OntoLogX: Ontology-Guided Knowledge Graph Extraction from Cybersecurity Logs with Large Language Models
Cotti, Luca, Drago, Idilio, Rula, Anisa, Bianchini, Devis, Cerutti, Federico
System logs represent a valuable source of Cyber Threat Intelligence (CTI), capturing attacker behaviors, exploited vulnerabilities, and traces of malicious activity. Yet their utility is often limited by lack of structure, semantic inconsistency, and fragmentation across devices and sessions. Extracting actionable CTI from logs therefore requires approaches that can reconcile noisy, heterogeneous data into coherent and interoperable representations. We introduce OntoLogX, an autonomous Artificial Intelligence (AI) agent that leverages Large Language Models (LLMs) to transform raw logs into ontology-grounded Knowledge Graphs (KGs). OntoLogX integrates a lightweight log ontology with Retrieval Augmented Generation (RAG) and iterative correction steps, ensuring that generated KGs are syntactically and semantically valid. Beyond event-level analysis, the system aggregates KGs into sessions and employs a LLM to predict MITRE ATT&CK tactics, linking low-level log evidence to higher-level adversarial objectives. We evaluate OntoLogX on both logs from a public benchmark and a real-world honeypot dataset, demonstrating robust KG generation across multiple KGs backends and accurate mapping of adversarial activity to ATT&CK tactics. Results highlight the benefits of retrieval and correction for precision and recall, the effectiveness of code-oriented models in structured log analysis, and the value of ontology-grounded representations for actionable CTI extraction.
Feasibility of Structuring Stress Documentation Using an Ontology-Guided Large Language Model
Kim, Hyeoneui, Kim, Jeongha, Xu, Huijing, Jung, Jinsun, Kang, Sunghoon, Jang, Sun Joo
Stress, arising from the dynamic interaction between external stressors, individual appraisals, and physiological or psychological responses, significantly impacts health yet is often underreported and inconsistently documented, typically captured as unstructured free-text in electronic health records. Ambient AI technologies offer promise in reducing documentation burden, but predominantly generate unstructured narratives, limiting downstream clinical utility. This study aimed to develop an ontology for mental stress and evaluate the feasibility of using a Large Language Model (LLM) to extract ontology-guided stress-related information from narrative text. The Mental Stress Ontology (MeSO) was developed by integrating theoretical models like the Transactional Model of Stress with concepts from 11 validated stress assessment tools. MeSO's structure and content were refined using Ontology Pitfall Scanner! and expert validation. Using MeSO, six categories of stress-related information--stressor, stress response, coping strategy, duration, onset, and temporal profile--were extracted from 35 Reddit posts using Claude Sonnet 4. Human reviewers evaluated accuracy and ontology coverage. The final ontology included 181 concepts across eight top-level classes. Of 220 extractable stress-related items, the LLM correctly identified 172 (78.2%), misclassified 27 (12.3%), and missed 21 (9.5%). All correctly extracted items were accurately mapped to MeSO, although 24 relevant concepts were not yet represented in the ontology. This study demonstrates the feasibility of using an ontology-guided LLM for structured extraction of stress-related information, offering potential to enhance the consistency and utility of stress documentation in ambient AI systems. Future work should involve clinical dialogue data and comparison across LLMs.
Semantic Bridges Between First Order c-Representations and Cost-Based Semantics: An Initial Perspective
Leisegang, Nicholas, Casini, Giovanni, Meyer, Thomas
Weighted-knowledge bases and cost-based semantics represent a recent formalism introduced by Bienvenu et al. for Ontology Mediated Data Querying in the case where a given knowledge base is inconsistent. This is done by adding a weight to each statement in the knowledge base (KB), and then giving each DL interpretation a cost based on how often it breaks rules in the KB. In this paper we compare this approach with c-representations, a form of non-monotonic reasoning originally introduced by Kern-Isberner. c-Representations describe a means to interpret defeasible concept inclusions in the first-order case. This is done by assigning a numerical ranking to each interpretations via penalties for each violated conditional. We compare these two approaches on a semantic level. In particular, we show that under certain conditions a weighted knowledge base and a set of defeasible conditionals can generate the same ordering on interpretations, and therefore an equivalence of semantic structures up to relative cost. Moreover, we compare entailment described in both cases, where certain notions are equivalently expressible in both formalisms. Our results have the potential to benefit further work on both cost-based semantics and c-representations